Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 0.0e+00 1188.7 597 100.0
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 1.2e-298 1029.2 606 85.8
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 2.9e-276 954.9 612 80.1
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 2.2e-271 938.7 584 80.3
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 2.8e-271 938.3 604 78.1
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 2.4e-270 935.3 602 77.4
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 2.9e-268 928.3 596 77.9
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 5.0e-268 927.5 596 77.7
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 8.5e-268 926.8 603 76.8
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 2.5e-267 925.2 604 77.5
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 6.1e-266 920.6 604 76.7
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 1.4e-265 919.5 603 76.0
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 1.4e-265 919.5 603 76.0
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 1.8e-265 919.1 603 76.5
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 2.0e-264 915.6 584 77.2
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 3.3e-264 914.8 608 76.3
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 4.1e-262 907.9 600 76.0
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 5.3e-262 907.5 603 75.3
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 7.0e-262 907.1 603 75.3
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 9.1e-262 906.7 605 75.4
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 2.7e-261 905.2 600 75.7
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 5.9e-261 904.0 642 73.7
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 1.3e-260 902.9 620 74.4
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.3e-260 902.9 603 74.8
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 1.7e-260 902.5 602 75.2
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 2.9e-260 901.7 602 75.2
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.5e-259 898.7 601 75.7
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 9.4e-259 896.7 601 74.9
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.6e-258 896.0 611 74.0
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 1.6e-258 896.0 607 75.0
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 2.1e-258 895.6 584 76.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 2.7e-258 895.2 524 83.6
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 3.6e-258 894.8 584 77.1
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 8.0e-258 893.6 584 75.7
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 6.8e-257 890.6 584 76.5
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 8.8e-257 890.2 585 76.8
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 8.8e-257 890.2 600 74.5
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.2e-256 889.8 613 74.4
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 1.2e-256 889.8 597 75.0
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.3e-255 886.3 585 76.4
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 4.8e-255 884.4 593 74.0
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 1.1e-254 883.2 603 74.0
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 2.4e-254 882.1 603 74.6
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 4.1e-254 881.3 602 73.4
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 1.3e-252 876.3 607 73.5
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.7e-252 875.9 632 71.8
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 8.5e-252 873.6 607 73.1
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 8.5e-252 873.6 607 73.0
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 7.2e-251 870.5 539 79.4
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 7.2e-251 870.5 599 74.1
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 3.6e-250 868.2 582 75.6
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 2.3e-249 865.5 607 74.3
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 1.7e-247 859.4 593 73.0
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 1.7e-247 859.4 544 77.6
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 3.7e-247 858.2 603 71.6
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 1.2e-245 853.2 595 72.6
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 4.5e-245 851.3 607 71.8
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 1.0e-244 850.1 601 72.7
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 2.9e-244 848.6 601 72.7
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 8.6e-244 847.0 690 66.1
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 1.9e-243 845.9 592 72.5
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 3.6e-242 841.6 579 73.7
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 8.0e-242 840.5 590 71.5
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.8e-241 839.3 585 72.5
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 3.0e-241 838.6 585 73.3
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 5.2e-241 837.8 594 71.7
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 2.0e-240 835.9 600 71.2
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.6e-240 835.5 608 71.5
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 1.2e-237 826.6 580 71.4
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 2.0e-237 825.9 612 69.6
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 2.0e-237 825.9 611 69.4
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 2.3e-236 822.4 616 69.2
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 2.3e-236 822.4 581 71.8
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 6.6e-236 820.8 511 78.5
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 1.5e-235 819.7 590 71.0
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.5e-235 819.7 581 71.8
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 7.3e-235 817.4 575 72.0
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 1.2e-234 816.6 774 58.4
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.0e-232 809.3 633 67.6
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 1.4e-230 803.1 597 69.2
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 1.4e-230 803.1 614 69.2
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 2.0e-224 782.7 584 68.8
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 9.8e-224 780.4 520 75.2
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 1.0e-220 770.4 514 75.9
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 1.5e-219 766.5 598 66.6
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 5.6e-219 764.6 570 68.4
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.1e-217 760.4 602 65.0
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 7.6e-216 754.2 659 64.0
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 8.4e-215 750.7 578 68.3
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 5.4e-214 748.0 734 57.1
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 1.0e-204 717.2 523 66.9
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 3.1e-201 705.7 602 62.8
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 1.2e-197 693.7 560 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.3e-196 690.3 572 60.5
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 3.3e-195 685.6 458 75.1
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 8.1e-194 681.0 450 76.2
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.7e-191 673.3 551 61.7
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 9.3e-190 667.5 567 59.8
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.9e-175 619.4 449 70.2
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 1.0e-156 557.8 393 71.2
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 1.1e-145 521.2 387 70.8
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 3.5e-136 489.6 287 86.4
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 2.9e-135 486.5 334 73.7
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.3e-127 461.1 309 73.5
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 4.3e-126 456.1 270 79.3
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 8.0e-125 451.8 562 45.7
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.0e-111 408.3 344 64.5
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.9e-94 350.9 258 69.0
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.0e-87 328.6 251 65.7
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.9e-86 324.3 260 63.5
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.4e-84 318.2 187 82.9
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 3.5e-72 276.9 444 38.7
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.6e-69 268.1 225 63.6
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 1.8e-63 248.1 178 68.5
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 4.6e-56 223.4 133 82.7
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.1e-49 202.2 371 38.3
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 3.2e-49 200.7 108 81.5
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 8.8e-47 192.6 137 69.3
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.1e-44 184.1 193 54.9
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 3.3e-38 164.1 156 62.2
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 9.7e-38 162.5 109 67.0
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 5.0e-34 150.2 183 50.8
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 2.2e-29 134.8 167 52.7
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 1.9e-25 121.7 66 80.3
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 4.0e-23 114.0 260 29.6
QL04p021235 Quercus lobata HOM05D006110 ORTHO05D011410 6.8e-07 60.1 55 63.6


User provided reference genes

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