Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028478 Vanilla planifolia HOM05D002708 ORTHO05D003516 2.4e-90 335.5 170 100.0
Aqoxy7G03410 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 1.5e-71 273.1 167 82.0
Cc00_g16980 Coffea canephora HOM05D002708 ORTHO05D003516 2.5e-71 272.3 165 81.2
Eucgr.J02249 Eucalyptus grandis HOM05D002708 ORTHO05D003516 5.5e-71 271.2 168 79.8
Nn3g18494 Nelumbo nucifera HOM05D002708 ORTHO05D003516 1.2e-70 270.0 170 79.4
Oeu037396.1 Olea europaea HOM05D002708 ORTHO05D003516 1.2e-70 270.0 165 79.4
TAR375G0643 Trochodendron aralioides HOM05D002708 ORTHO05D003516 4.7e-70 268.1 170 78.2
Nn4g24628 Nelumbo nucifera HOM05D002708 ORTHO05D003516 1.0e-69 266.9 169 78.7
Oeu002888.1 Olea europaea HOM05D002708 ORTHO05D003516 1.0e-69 266.9 165 78.2
vmacro21095 Vaccinium macrocarpon HOM05D002708 ORTHO05D003516 1.0e-69 266.9 167 80.2
GSVIVG01036012001 Vitis vinifera HOM05D002708 ORTHO05D003516 1.4e-69 266.5 170 78.8
Dinv44002 Davidia involucrata HOM05D002708 ORTHO05D003516 3.0e-69 265.4 170 78.2
Nitab4.5_0001476g0150 Nicotiana tabacum HOM05D002708 ORTHO05D003516 4.0e-69 265.0 170 78.2
MSTRG.20407 Avicennia marina HOM05D002708 ORTHO05D003516 6.8e-69 264.2 167 77.2
CDE12G0538 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 8.8e-69 263.8 170 76.5
MBI19_g28098_MAGBIO Magnolia biondii HOM05D002708 ORTHO05D003516 8.8e-69 263.8 161 82.0
PSO063G5514 Papaver somniferum HOM05D002708 ORTHO05D003516 1.2e-68 263.5 170 76.5
PSO782G1674 Papaver somniferum HOM05D002708 ORTHO05D003516 2.0e-68 262.7 170 76.5
ATR0693G135 Amborella trichopoda HOM05D002708 ORTHO05D003516 3.4e-68 261.9 164 77.4
CAN.G1480.4 Capsicum annuum HOM05D002708 ORTHO05D003516 3.4e-68 261.9 170 77.1
Hma1.2p1_0021F.1_g014376 Hydrangea macrophylla HOM05D002708 ORTHO05D003516 3.4e-68 261.9 170 77.1
DCAR_029539 Daucus carota HOM05D002708 ORTHO05D003516 5.7e-68 261.2 170 76.5
Prupe.6G358600 Prunus persica HOM05D002708 ORTHO05D003516 5.7e-68 261.2 166 75.9
CSS0041941 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 7.5e-68 260.8 170 77.1
Lj9A548G53 Lonicera japonica HOM05D002708 ORTHO05D003516 7.5e-68 260.8 167 76.6
PSO017G2439 Papaver somniferum HOM05D002708 ORTHO05D003516 7.5e-68 260.8 170 75.9
Duzib052G0664 Durio zibethinus HOM05D002708 ORTHO05D003516 1.3e-67 260.0 167 76.0
ClCG09G010490 Citrullus lanatus HOM05D002708 ORTHO05D003516 1.7e-67 259.6 168 76.2
arahy.Tifrunner.gnm1.ann1.V30RJW Arachis hypogaea HOM05D002708 ORTHO05D003516 2.2e-67 259.2 167 76.0
Sabra06G0209700 Salix brachista HOM05D002708 ORTHO05D003516 2.2e-67 259.2 171 77.2
COL.COLO4_17667 Corchorus olitorius HOM05D002708 ORTHO05D003516 2.8e-67 258.8 162 78.4
MD04G1241100 Malus domestica HOM05D002708 ORTHO05D003516 2.8e-67 258.8 166 76.5
Sc20g0000810 Simmondsia chinensis HOM05D002708 ORTHO05D003516 2.8e-67 258.8 168 75.6
Zm00001eb024200 Zea mays HOM05D002708 ORTHO05D003516 3.7e-67 258.5 170 75.3
PGSC0003DMG400001674 Solanum tuberosum HOM05D002708 ORTHO05D003516 4.8e-67 258.1 170 75.3
MELO3C023701.2 Cucumis melo HOM05D002708 ORTHO05D003516 6.3e-67 257.7 168 75.0
CsaV3_7G024030 Cucumis sativus L. HOM05D002708 ORTHO05D003516 6.3e-67 257.7 168 75.0
PGR031G2892 Punica granatum HOM05D002708 ORTHO05D003516 6.3e-67 257.7 166 78.3
Manes.16G132500 Manihot esculenta HOM05D002708 ORTHO05D003516 8.3e-67 257.3 171 76.0
Manes.03G006600 Manihot esculenta HOM05D002708 ORTHO05D003516 1.1e-66 256.9 171 76.0
MELO3C013234.2 Cucumis melo HOM05D002708 ORTHO05D003516 1.4e-66 256.5 168 73.8
Dinv43573 Davidia involucrata HOM05D002708 ORTHO05D003516 1.4e-66 256.5 170 75.3
Hund22205 Selenicereus undatus HOM05D002708 ORTHO05D003516 1.4e-66 256.5 168 75.0
SEGI_26246 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 1.4e-66 256.5 164 77.4
Ca_15806_v3 Cicer arietinum L. HOM05D002708 ORTHO05D003516 1.8e-66 256.1 170 74.7
CsaV3_7G021200 Cucumis sativus L. HOM05D002708 ORTHO05D003516 1.8e-66 256.1 168 73.8
unitig_0.g1327 Utricularia gibba HOM05D002708 ORTHO05D003516 3.1e-66 255.4 165 75.8
Ciclev10007609m.g Citrus clementina HOM05D002708 ORTHO05D003516 7.0e-66 254.2 161 77.0
Sed0015739 Sechium edule HOM05D002708 ORTHO05D003516 9.1e-66 253.8 167 74.3
Lsat_1_v5_gn_1_83221 Lactuca sativa HOM05D002708 ORTHO05D003516 1.2e-65 253.4 161 78.9
Lj1g0003503 Lotus japonicus HOM05D002708 ORTHO05D003516 1.2e-65 253.4 165 75.2
Sed0010327 Sechium edule HOM05D002708 ORTHO05D003516 1.2e-65 253.4 165 75.8
ECA248G0935 Erigeron canadensis HOM05D002708 ORTHO05D003516 2.7e-65 252.3 162 77.2
SalBow5G4312 Salvia bowleyana HOM05D002708 ORTHO05D003516 2.7e-65 252.3 165 73.3
HanXRQChr11g0341881 Helianthus annuus HOM05D002708 ORTHO05D003516 3.5e-65 251.9 162 76.5
Lalb_Chr08g0244681 Lupinus albus HOM05D002708 ORTHO05D003516 4.5e-65 251.5 165 75.8
Glyma.07G107700 Glycine max HOM05D002708 ORTHO05D003516 5.9e-65 251.1 170 74.1
Nitab4.5_0012432g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 5.9e-65 251.1 194 68.6
HanXRQChr11g0352181 Helianthus annuus HOM05D002708 ORTHO05D003516 7.7e-65 250.8 162 75.9
Glyma.03G002400 Glycine max HOM05D002708 ORTHO05D003516 1.0e-64 250.4 170 73.5
Lsat_1_v5_gn_7_11740 Lactuca sativa HOM05D002708 ORTHO05D003516 1.0e-64 250.4 162 75.9
Psat5g034880 Pisum sativum HOM05D002708 ORTHO05D003516 1.0e-64 250.4 170 72.9
Phvul.009G084000 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 1.3e-64 250.0 170 73.5
Phvul.009G084100 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 1.3e-64 250.0 170 73.5
SEGI_28578 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 1.7e-64 249.6 164 75.0
Lalb_Chr23g0268061 Lupinus albus HOM05D002708 ORTHO05D003516 2.9e-64 248.8 170 75.3
TWI32G0606 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 2.9e-64 248.8 170 72.4
VMungo1309G2216 Vigna mungo HOM05D002708 ORTHO05D003516 3.8e-64 248.4 170 73.5
Sabra18G0018700 Salix brachista HOM05D002708 ORTHO05D003516 8.5e-64 247.3 171 73.7
Gorai.008G047600 Gossypium raimondii HOM05D002708 ORTHO05D003516 1.9e-63 246.1 162 74.7
Gohir.D12G045200 Gossypium hirsutum HOM05D002708 ORTHO05D003516 3.2e-63 245.4 162 74.7
Sopen01g035200 Solanum pennellii HOM05D002708 ORTHO05D003516 5.5e-63 244.6 170 71.8
unitig_0.g1581 Utricularia gibba HOM05D002708 ORTHO05D003516 7.2e-63 244.2 153 78.4
RcHm_v2.0_Chr3g0448281 Rosa chinensis HOM05D002708 ORTHO05D003516 1.0e-61 240.4 163 71.8
SEGI_02227 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 1.0e-61 240.4 164 73.8
Actinidia21606 Actinidia chinensis HOM05D002708 ORTHO05D003516 1.4e-61 240.0 166 72.3
arahy.Tifrunner.gnm1.ann1.9YLT9A Arachis hypogaea HOM05D002708 ORTHO05D003516 1.8e-61 239.6 167 71.3
Medtr3g105430 Medicago truncatula HOM05D002708 ORTHO05D003516 2.3e-61 239.2 166 71.1
Cfa017363 Carpinus fangiana HOM05D002708 ORTHO05D003516 5.2e-61 238.0 166 69.9
Gohir.D02G238500 Gossypium hirsutum HOM05D002708 ORTHO05D003516 5.2e-61 238.0 166 70.5
Gorai.005G267000 Gossypium raimondii HOM05D002708 ORTHO05D003516 5.2e-61 238.0 166 70.5
Thecc.02G010700 Theobroma cacao HOM05D002708 ORTHO05D003516 6.8e-61 237.7 166 69.9
Gohir.A03G216900 Gossypium hirsutum HOM05D002708 ORTHO05D003516 1.2e-60 236.9 166 69.9
FvH4_6g00800 Fragaria vesca HOM05D002708 ORTHO05D003516 1.5e-60 236.5 162 72.2
FAN14G0317 Fragaria x ananassa HOM05D002708 ORTHO05D003516 1.5e-60 236.5 162 72.2
ATR0794G148 Amborella trichopoda HOM05D002708 ORTHO05D003516 2.0e-60 236.1 163 73.0
ECA248G3827 Erigeron canadensis HOM05D002708 ORTHO05D003516 2.0e-60 236.1 162 72.8
Os10g0569200 Oryza sativa ssp. japonica HOM05D002708 ORTHO05D003516 2.0e-60 236.1 152 74.3
BraA04t17520Z Brassica rapa HOM05D002708 ORTHO05D003516 3.4e-60 235.3 166 72.9
Nitab4.5_0009957g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 3.4e-60 235.3 170 72.9
Solyc01g088370.3 Solanum lycopersicum HOM05D002708 ORTHO05D003516 3.4e-60 235.3 170 69.4
FAN05G3540 Fragaria x ananassa HOM05D002708 ORTHO05D003516 4.4e-60 235.0 162 71.0
Peaxi162Scf01124g00013 Petunia axillaris HOM05D002708 ORTHO05D003516 4.4e-60 235.0 170 70.0
FAN09G1379 Fragaria x ananassa HOM05D002708 ORTHO05D003516 5.7e-60 234.6 162 70.4
A04p19190 Brassica napus HOM05D002708 ORTHO05D003516 7.5e-60 234.2 166 72.3
Haze_20811 Corylus avellana HOM05D002708 ORTHO05D003516 2.8e-59 232.3 166 68.7
Pp3c7_370 Physcomitrium patens HOM05D002708 ORTHO05D003516 2.8e-59 232.3 167 65.9
CSS0039264 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 6.3e-59 231.1 166 71.1
Pp3c11_25960 Physcomitrium patens HOM05D002708 ORTHO05D003516 8.3e-59 230.7 167 66.5
CSS0024835 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 1.4e-58 229.9 166 71.1
Potri.006G267500 Populus trichocarpa HOM05D002708 ORTHO05D003516 1.4e-58 229.9 171 71.3
Lj1g0008805 Lotus japonicus HOM05D002708 ORTHO05D003516 2.4e-58 229.2 170 68.2
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 3.1e-58 228.8 171 66.1
AUR62037481 Chenopodium quinoa HOM05D002708 ORTHO05D003516 1.6e-57 226.5 163 70.6
AUR62004771 Chenopodium quinoa HOM05D002708 ORTHO05D003516 2.0e-57 226.1 138 78.3
Thhalv10000061m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 2.0e-57 226.1 171 70.2
TWI63G0006 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 2.0e-57 226.1 168 68.5
Potri.018G015200 Populus trichocarpa HOM05D002708 ORTHO05D003516 2.7e-57 225.7 163 72.4
Gohir.A12G046100 Gossypium hirsutum HOM05D002708 ORTHO05D003516 3.5e-57 225.3 162 69.1
CSS0029201 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 4.5e-57 224.9 166 71.1
EL10Ac5g11414 Beta vulgaris HOM05D002708 ORTHO05D003516 5.9e-57 224.6 168 66.7
Migut.B01470 Erythranthe guttata HOM05D002708 ORTHO05D003516 1.3e-56 223.4 165 67.9
Haze_24936 Corylus avellana HOM05D002708 ORTHO05D003516 1.7e-56 223.0 166 68.1
MD12G1258100 Malus domestica HOM05D002708 ORTHO05D003516 1.7e-56 223.0 166 68.7
CANSAT25G3904 Cannabis sativa HOM05D002708 ORTHO05D003516 2.3e-56 222.6 166 69.9
Carub.0006s2495 Capsella rubella HOM05D002708 ORTHO05D003516 3.8e-56 221.9 163 71.8
FAN02G3944 Fragaria x ananassa HOM05D002708 ORTHO05D003516 3.8e-56 221.9 178 64.0
EL10Ac4g08928 Beta vulgaris HOM05D002708 ORTHO05D003516 5.0e-56 221.5 168 67.3
CDE01G0349 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 6.6e-56 221.1 126 83.3
Mapoly0108s0028 Marchantia polymorpha HOM05D002708 ORTHO05D003516 6.6e-56 221.1 168 63.7
TPR.G40117 Trifolium pratense HOM05D002708 ORTHO05D003516 1.5e-55 219.9 170 64.7
BcaB06g28016 Brassica carinata HOM05D002708 ORTHO05D003516 5.6e-55 218.0 166 68.7
QL02p018118 Quercus lobata HOM05D002708 ORTHO05D003516 5.6e-55 218.0 146 74.7
CiPaw.08G004600 Carya illinoinensis HOM05D002708 ORTHO05D003516 1.2e-54 216.9 145 73.8
COL.COLO4_30887 Corchorus olitorius HOM05D002708 ORTHO05D003516 3.6e-54 215.3 165 67.3
BcaC02g08409 Brassica carinata HOM05D002708 ORTHO05D003516 6.1e-54 214.5 166 68.7
BolC4t27001H Brassica oleracea HOM05D002708 ORTHO05D003516 6.1e-54 214.5 166 68.7
C04p54590 Brassica napus HOM05D002708 ORTHO05D003516 1.4e-53 213.4 166 68.1
Sp4g03800 Schrenkiella parvula HOM05D002708 ORTHO05D003516 1.8e-53 213.0 166 69.3
Cfa002667 Carpinus fangiana HOM05D002708 ORTHO05D003516 6.8e-53 211.1 145 72.4
Atru.chr7.2587 Acer truncatum HOM05D002708 ORTHO05D003516 1.5e-52 209.9 141 73.8
HanXRQChr03g0088081 Helianthus annuus HOM05D002708 ORTHO05D003516 2.6e-52 209.1 162 67.3
BcaC07g40905 Brassica carinata HOM05D002708 ORTHO05D003516 9.8e-52 207.2 166 66.9
C08p39040 Brassica napus HOM05D002708 ORTHO05D003516 9.8e-52 207.2 166 66.9
BolC8t51477H Brassica oleracea HOM05D002708 ORTHO05D003516 9.8e-52 207.2 166 66.9
BraA09t41006Z Brassica rapa HOM05D002708 ORTHO05D003516 9.8e-52 207.2 166 66.9
A09p56110 Brassica napus HOM05D002708 ORTHO05D003516 3.7e-51 205.3 166 66.3
TPR.G21430 Trifolium pratense HOM05D002708 ORTHO05D003516 6.4e-51 204.5 141 72.3
AL6G38780 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 8.3e-51 204.1 163 65.6
CBR_g32387 Chara braunii HOM05D002708 ORTHO05D003516 8.3e-51 204.1 163 60.7
THA.LOC104803605 Tarenaya hassleriana HOM05D002708 ORTHO05D003516 3.2e-50 202.2 170 63.5
CARHR294550 Cardamine hirsuta HOM05D002708 ORTHO05D003516 4.6e-49 198.4 142 73.2
AL6G39390 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 1.3e-48 196.8 142 71.8
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 3.9e-48 195.3 142 71.1
AT5G27640 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 8.6e-48 194.1 142 71.1
Cfa013020 Carpinus fangiana HOM05D002708 ORTHO05D003516 7.3e-47 191.0 145 66.9
AT5G25780 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 2.8e-46 189.1 143 67.8
Actinidia33292 Actinidia chinensis HOM05D002708 ORTHO05D003516 1.0e-45 187.2 166 60.2
Lsat_1_v5_gn_8_82921 Lactuca sativa HOM05D002708 ORTHO05D003516 2.3e-45 186.0 165 63.6
Cpa.g.sc17.146 Carica papaya HOM05D002708 ORTHO05D003516 4.0e-45 185.3 131 73.3
Peaxi162Scf01124g00123 Petunia axillaris HOM05D002708 ORTHO05D003516 8.9e-45 184.1 149 64.4
QL08p065006 Quercus lobata HOM05D002708 ORTHO05D003516 4.4e-44 181.8 166 59.6
SGA_v2.0_scaffold85G26804 Striga asiatica HOM05D002708 ORTHO05D003516 7.5e-44 181.0 164 57.9
PSO384G0469 Papaver somniferum HOM05D002708 ORTHO05D003516 2.9e-43 179.1 146 63.7
ClCG09G010530 Citrullus lanatus HOM05D002708 ORTHO05D003516 8.3e-43 177.6 170 58.2
SGA_v2.0_scaffold578G53025 Striga asiatica HOM05D002708 ORTHO05D003516 9.2e-42 174.1 108 75.0
BcaNung04121 Brassica carinata HOM05D002708 ORTHO05D003516 3.3e-39 165.6 165 55.8
SMO270G0119 Selaginella moellendorffii HOM05D002708 ORTHO05D003516 3.2e-34 149.1 138 56.5
Thhalv10027018m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 7.1e-34 147.9 166 51.2
MCO03G077 Micromonas commoda HOM05D002708 ORTHO05D003516 1.6e-33 146.7 170 48.2
Aa31LG2G18580 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-30 137.1 163 47.2
BcaNung01503 Brassica carinata HOM05D002708 ORTHO05D003516 1.6e-30 136.7 129 55.8
C07p58860 Brassica napus HOM05D002708 ORTHO05D003516 1.6e-30 136.7 129 55.8
BolC7t46333H Brassica oleracea HOM05D002708 ORTHO05D003516 1.6e-30 136.7 129 55.8
Cre03.g190100 Chlamydomonas reinhardtii HOM05D002708 ORTHO05D003516 1.6e-30 136.7 163 47.9
PRCOL_00000791 Prasinoderma coloniale HOM05D002708 ORTHO05D003516 1.1e-29 134.0 163 45.4
Medtr7g056267 Medicago truncatula HOM05D002708 ORTHO05D003516 1.1e-23 114.0 88 67.0
AagrBONN_evm.TU.Sc2ySwM_117.472 Anthoceros agrestis HOM05D002708 ORTHO05D003516 4.3e-23 112.1 55 85.5
Nitab4.5_0015087g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 5.4e-18 95.1 54 79.6
HPP92_005389 Vanilla planifolia HOM05D002708 ORTHO05D003516 1.0e-16 90.9 59 78.0
AL1G59060 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 8.7e-16 87.8 61 65.6
RhsimUnG0158600 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.3e-11 73.9 38 84.2
Psat6g059000 Pisum sativum HOM05D002708 ORTHO05D003516 1.7e-11 73.6 66 54.5
Rhsim01G0145200 Rhododendron simsii HOM05D002708 ORTHO05D003516 1.1e-10 70.9 37 83.8
Rhsim05G0131800 Rhododendron simsii HOM05D002708 ORTHO05D000013 5.4e-10 68.6 55 60.0
Thhalv10012255m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 4.6e-09 65.5 97 42.3
QL02p088243 Quercus lobata HOM05D002708 ORTHO05D003516 6.0e-09 65.1 155 32.3
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 7.9e-09 64.7 91 42.9
QL08p062901 Quercus lobata HOM05D002708 ORTHO05D003516 1.1e-07 60.8 95 40.0
QL02p087594 Quercus lobata HOM05D002708 ORTHO05D003516 1.5e-07 60.5 99 42.4
Lj4g0017545 Lotus japonicus HOM05D002708 ORTHO05D003516 4.3e-07 58.9 37 73.0
BraA03t15136Z Brassica rapa HOM05D046779 ORTHO05D042840 3.7e-06 55.8 68 45.6
TPR.G40646 Trifolium pratense HOM05D002708 ORTHO05D003516 3.7e-06 55.8 48 68.8
Aqoxy7G03412 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 6.2e-06 55.1 38 76.3


User provided reference genes

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