Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028029 Vanilla planifolia HOM05D001887 ORTHO05D006549 8.5e-63 243.4 117 100.0
HPP92_028226 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.0e-51 205.7 109 92.7
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.0e-48 195.7 109 89.0
HPP92_027917 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-46 189.9 109 86.2
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 7.7e-40 167.2 109 73.4
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 1.0e-39 166.8 109 74.3
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 1.7e-39 166.0 109 73.4
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 5.0e-39 164.5 109 72.5
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 6.6e-39 164.1 109 74.3
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 8.6e-39 163.7 109 71.6
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 8.6e-39 163.7 109 71.6
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.1e-38 163.3 109 75.2
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 1.1e-38 163.3 109 75.2
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 1.5e-38 162.9 109 74.3
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 2.5e-38 162.2 109 71.6
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 3.3e-38 161.8 101 76.2
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 4.2e-38 161.4 109 71.6
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 5.5e-38 161.0 101 77.2
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 5.5e-38 161.0 109 73.4
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 7.2e-38 160.6 109 70.6
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 9.5e-38 160.2 101 77.2
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 9.5e-38 160.2 101 77.2
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 9.5e-38 160.2 109 70.6
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 9.5e-38 160.2 109 73.4
Sc01g0007960 Simmondsia chinensis HOM05D001887 ORTHO05D006549 1.2e-37 159.8 109 68.8
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 1.6e-37 159.5 109 69.7
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 1.6e-37 159.5 109 69.7
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 1.6e-37 159.5 109 70.6
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 1.6e-37 159.5 109 70.6
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 1.6e-37 159.5 109 69.7
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 2.1e-37 159.1 109 70.6
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 2.1e-37 159.1 109 70.6
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.8e-37 158.7 109 69.7
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 2.8e-37 158.7 109 68.8
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 2.8e-37 158.7 109 70.6
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 2.8e-37 158.7 109 69.7
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 2.8e-37 158.7 109 69.7
Dinv25138 Davidia involucrata HOM05D001887 ORTHO05D006549 3.6e-37 158.3 109 70.6
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 3.6e-37 158.3 109 70.6
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 4.7e-37 157.9 101 75.2
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 6.1e-37 157.5 101 73.3
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 6.1e-37 157.5 109 68.8
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 6.1e-37 157.5 109 69.7
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 6.1e-37 157.5 101 75.2
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 8.0e-37 157.1 101 74.3
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 8.0e-37 157.1 101 74.3
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 8.0e-37 157.1 101 74.3
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 8.0e-37 157.1 101 74.3
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 1.0e-36 156.8 109 68.8
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 1.4e-36 156.4 109 70.6
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 1.4e-36 156.4 109 68.8
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 1.4e-36 156.4 101 73.3
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 1.8e-36 156.0 101 73.3
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 1.8e-36 156.0 109 67.0
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 1.8e-36 156.0 109 68.8
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 1.8e-36 156.0 101 73.3
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 1.8e-36 156.0 101 73.3
TPR.G31429 Trifolium pratense HOM05D001887 ORTHO05D006549 1.8e-36 156.0 109 67.9
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 1.8e-36 156.0 109 69.7
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.3e-36 155.6 109 67.0
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 4.0e-36 154.8 109 69.7
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 4.0e-36 154.8 109 69.7
SalBow1G4075 Salvia bowleyana HOM05D001887 ORTHO05D006549 5.2e-36 154.5 101 71.3
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 6.8e-36 154.1 109 69.7
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 6.8e-36 154.1 109 69.7
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 6.8e-36 154.1 109 67.9
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 6.8e-36 154.1 101 73.3
Atru.chr9.1200 Acer truncatum HOM05D001887 ORTHO05D006549 1.2e-35 153.3 109 68.8
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.5e-35 152.9 109 67.9
Cpa.g.sc98.72 Carica papaya HOM05D001887 ORTHO05D006549 2.0e-35 152.5 109 67.0
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 2.0e-35 152.5 109 67.9
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 2.6e-35 152.1 109 68.8
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 2.6e-35 152.1 109 67.0
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 2.6e-35 152.1 109 67.9
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 2.6e-35 152.1 109 68.8
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 3.4e-35 151.8 109 68.8
SEGI_02234 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 4.4e-35 151.4 101 69.3
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 7.5e-35 150.6 109 67.9
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 9.8e-35 150.2 109 67.0
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 1.3e-34 149.8 109 66.1
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 1.7e-34 149.4 109 68.8
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 1.7e-34 149.4 101 69.3
ATR0107G001 Amborella trichopoda HOM05D001887 ORTHO05D006549 2.2e-34 149.1 111 68.5
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 2.2e-34 149.1 109 66.1
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 4.9e-34 147.9 109 65.1
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 8.3e-34 147.1 111 67.6
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 1.1e-33 146.7 109 64.2
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 1.8e-33 146.0 109 62.4
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 4.1e-33 144.8 101 67.3
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 7.0e-33 144.1 101 66.3
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 1.6e-32 142.9 101 66.3
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 1.6e-32 142.9 101 66.3
SHI07797 Sapria himalayana HOM05D001887 ORTHO05D006549 2.7e-32 142.1 109 63.3
CBR_g69645 Chara braunii HOM05D001887 ORTHO05D006549 3.5e-32 141.7 95 69.5
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 4.5e-32 141.4 101 66.3
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 4.5e-32 141.4 101 66.3
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 4.5e-32 141.4 101 66.3
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 4.5e-32 141.4 101 66.3
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 4.5e-32 141.4 101 66.3
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 1.0e-31 140.2 101 65.3
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 1.0e-31 140.2 101 65.3
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 1.0e-31 140.2 101 68.3
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.3e-31 139.8 101 65.3
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.3e-31 139.8 101 65.3
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 1.3e-31 139.8 101 65.3
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 5.0e-31 137.9 101 63.4
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 5.0e-31 137.9 101 65.3
HPP92_000026 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.5e-30 135.6 110 65.5
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 2.5e-22 109.0 109 43.1
Psat5g140400 Pisum sativum HOM05D001887 ORTHO05D006549 4.7e-21 104.8 75 64.0
Psat3g155360 Pisum sativum HOM05D000527 ORTHO05D325619 7.5e-19 97.4 85 55.3
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 9.2e-17 90.5 63 68.3
Psat4g195160 Pisum sativum HOM05D000527 ORTHO05D000559 1.7e-15 86.3 64 60.9
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 6.6e-15 84.3 99 45.5
Psat5g084960 Pisum sativum HOM05D001887 ORTHO05D006549 1.9e-14 82.8 112 42.9
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 1.6e-13 79.7 93 43.0
HPP92_013056 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.1e-13 79.3 47 83.0
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 2.3e-12 75.9 104 35.6
CDE11G1156 Ceratophyllum demersum HOM05D001409 ORTHO05D129850 6.8e-12 74.3 39 89.7
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 6.0e-08 61.2 81 46.9
Psat0s3354g0040 Pisum sativum HOM05D001887 ORTHO05D006549 1.1e-06 57.0 45 60.0


User provided reference genes

Program Settings