Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.3e-67 259.6 133 100.0
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 4.8e-62 241.1 131 94.7
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-61 240.0 133 94.0
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.2e-59 232.3 132 92.4
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 6.9e-53 210.7 130 77.7
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 6.9e-53 210.7 129 78.3
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 1.5e-52 209.5 129 79.8
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 2.6e-52 208.8 129 77.5
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 2.6e-52 208.8 129 77.5
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 2.6e-52 208.8 130 78.5
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 3.4e-52 208.4 130 76.9
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 4.5e-52 208.0 129 76.7
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 4.5e-52 208.0 130 76.2
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 4.5e-52 208.0 130 76.2
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 5.9e-52 207.6 130 74.6
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 7.7e-52 207.2 129 76.7
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 7.7e-52 207.2 131 75.6
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 7.7e-52 207.2 130 76.2
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 7.7e-52 207.2 118 89.8
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 1.0e-51 206.8 130 76.9
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 1.0e-51 206.8 130 76.2
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 1.0e-51 206.8 130 76.2
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 1.0e-51 206.8 130 77.7
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 1.3e-51 206.5 129 75.2
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 1.3e-51 206.5 129 76.0
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 1.7e-51 206.1 129 76.7
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.2e-51 205.7 131 74.0
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 2.2e-51 205.7 128 75.8
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 2.2e-51 205.7 129 76.0
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 2.9e-51 205.3 129 76.7
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 2.9e-51 205.3 129 77.5
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 2.9e-51 205.3 129 76.0
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 2.9e-51 205.3 131 73.3
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 3.8e-51 204.9 130 76.2
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 3.8e-51 204.9 129 76.0
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 5.0e-51 204.5 129 75.2
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 76.0
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 6.5e-51 204.1 131 73.3
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 75.2
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 74.4
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 74.4
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 76.0
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 6.5e-51 204.1 129 76.0
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 1.1e-50 203.4 129 75.2
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 1.1e-50 203.4 129 75.2
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.4e-50 203.0 129 75.2
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 1.4e-50 203.0 129 76.0
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 1.4e-50 203.0 129 75.2
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 1.9e-50 202.6 128 75.0
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 1.9e-50 202.6 129 74.4
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 1.9e-50 202.6 129 72.9
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 1.9e-50 202.6 129 74.4
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 1.9e-50 202.6 129 74.4
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 2.5e-50 202.2 129 73.6
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 2.5e-50 202.2 129 76.7
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 2.5e-50 202.2 129 73.6
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 3.2e-50 201.8 129 73.6
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 3.2e-50 201.8 129 74.4
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 3.2e-50 201.8 131 74.0
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 3.2e-50 201.8 129 73.6
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 3.2e-50 201.8 129 76.0
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 5.5e-50 201.1 129 72.9
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 5.5e-50 201.1 129 72.9
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 7.2e-50 200.7 129 72.9
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 7.2e-50 200.7 129 72.9
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 9.4e-50 200.3 130 72.3
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 9.4e-50 200.3 129 72.9
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 1.2e-49 199.9 129 72.1
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 2.1e-49 199.1 129 72.9
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 2.1e-49 199.1 129 74.4
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 2.7e-49 198.7 129 72.9
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 2.7e-49 198.7 129 73.6
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 3.6e-49 198.4 129 74.4
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 3.6e-49 198.4 129 73.6
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 3.6e-49 198.4 129 72.1
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 4.7e-49 198.0 129 70.5
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 6.1e-49 197.6 129 72.9
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 6.1e-49 197.6 129 70.5
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 7.9e-49 197.2 129 72.9
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 7.9e-49 197.2 130 73.1
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 7.9e-49 197.2 130 72.3
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 1.0e-48 196.8 129 71.3
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 1.4e-48 196.4 129 72.1
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 1.4e-48 196.4 129 72.1
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 1.8e-48 196.1 129 72.1
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 1.8e-48 196.1 129 72.1
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 1.8e-48 196.1 129 73.6
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.3e-48 195.7 129 72.1
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.3e-48 195.7 129 72.1
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 2.3e-48 195.7 129 72.1
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 3.0e-48 195.3 129 72.1
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 3.0e-48 195.3 129 72.1
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 3.0e-48 195.3 129 72.1
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 3.0e-48 195.3 131 71.0
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 3.0e-48 195.3 129 72.9
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 8.8e-48 193.7 129 69.8
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 8.8e-48 193.7 130 68.5
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 1.5e-47 193.0 129 72.9
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 4.4e-47 191.4 129 71.3
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 4.4e-47 191.4 129 71.3
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 4.4e-47 191.4 129 70.5
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 4.4e-47 191.4 129 70.5
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 2.8e-46 188.7 130 66.9
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 4.8e-46 188.0 130 69.2
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 1.5e-44 183.0 130 66.2
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 2.9e-43 178.7 129 67.4
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 2.5e-42 175.6 130 69.2
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 1.5e-39 166.4 102 76.5
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 9.7e-39 163.7 128 65.6
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 4.4e-31 138.3 85 78.8
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 8.5e-27 124.0 74 78.4
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 4.7e-25 118.2 119 53.8
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 1.3e-22 110.2 147 44.2
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 1.8e-21 106.3 72 70.8
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 2.0e-15 86.3 85 51.8
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 3.4e-15 85.5 132 39.4
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 8.3e-14 80.9 129 35.7
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 5.6e-10 68.2 109 35.8


User provided reference genes

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