Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020079 Vanilla planifolia HOM05D003434 ORTHO05D004465 0.0e+00 1169.5 577 100.0
TAR626G1243 Trochodendron aralioides HOM05D003434 ORTHO05D004465 3.3e-67 260.4 139 82.0
Lalb_Chr17g0340551 Lupinus albus HOM05D003434 ORTHO05D004465 3.7e-66 256.9 139 80.6
TPR.G27919 Trifolium pratense HOM05D003434 ORTHO05D004465 3.7e-66 256.9 139 80.6
CSS0016315 Camellia sinensis var. sinensis HOM05D003434 ORTHO05D004465 4.8e-66 256.5 138 80.4
Lj1g0009928 Lotus japonicus HOM05D003434 ORTHO05D004465 6.2e-66 256.1 139 79.9
Ca_13044_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 8.2e-66 255.8 139 79.9
Os02g0591800 Oryza sativa ssp. japonica HOM05D003434 ORTHO05D004465 8.2e-66 255.8 137 80.3
Thecc.07G077100 Theobroma cacao HOM05D003434 ORTHO05D004465 2.4e-65 254.2 139 79.1
TWI38G2119 Tripterygium wilfordii HOM05D003434 ORTHO05D004465 2.4e-65 254.2 139 79.1
Dinv08315 Davidia involucrata HOM05D003434 ORTHO05D002822 4.0e-65 253.4 139 78.4
Lalb_Chr04g0258261 Lupinus albus HOM05D003434 ORTHO05D004465 4.0e-65 253.4 139 79.9
Duzib170G0474 Durio zibethinus HOM05D003434 ORTHO05D004465 5.3e-65 253.1 139 79.1
arahy.Tifrunner.gnm1.ann1.L3HXPU Arachis hypogaea HOM05D003434 ORTHO05D004465 6.9e-65 252.7 139 79.1
Potri.001G403100 Populus trichocarpa HOM05D003434 ORTHO05D004465 6.9e-65 252.7 139 79.1
Sp1g39500 Schrenkiella parvula HOM05D003434 ORTHO05D004465 6.9e-65 252.7 138 79.7
Sp3g13710 Schrenkiella parvula HOM05D003434 ORTHO05D004465 6.9e-65 252.7 138 79.7
CDE07G1591 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 9.0e-65 252.3 139 80.6
Ca_05552_v3 Cicer arietinum L. HOM05D003434 ORTHO05D004465 9.0e-65 252.3 139 78.4
BcaB06g29579 Brassica carinata HOM05D003434 ORTHO05D004465 1.2e-64 251.9 138 79.0
Ciclev10008977m.g Citrus clementina HOM05D003434 ORTHO05D004465 1.2e-64 251.9 139 78.4
MD03G1224000 Malus domestica HOM05D003434 ORTHO05D004465 1.2e-64 251.9 139 79.1
GSVIVG01028448001 Vitis vinifera HOM05D003434 ORTHO05D004465 1.2e-64 251.9 139 78.4
BcaB04g20924 Brassica carinata HOM05D003434 ORTHO05D004465 1.5e-64 251.5 138 79.0
Thhalv10011666m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 1.5e-64 251.5 138 79.7
C01p49000 Brassica napus HOM05D003434 ORTHO05D004465 2.0e-64 251.1 138 78.3
arahy.Tifrunner.gnm1.ann1.LC97RS Arachis hypogaea HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 77.7
Cpa.g.sc80.31 Carica papaya HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 79.9
Thhalv10021159m.g Eutrema salsugineum HOM05D003434 ORTHO05D004465 2.6e-64 250.8 138 78.3
Glyma.08G255000 Glycine max HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 79.9
Glyma.18G278000 Glycine max HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 79.1
Psat3g183280 Pisum sativum HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 78.4
Psat6g028560 Pisum sativum HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 78.4
Potri.011G122200 Populus trichocarpa HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 79.1
THA.LOC104818062 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 2.6e-64 250.8 139 79.1
TPR.G38897 Trifolium pratense HOM05D003434 ORTHO05D004465 2.6e-64 250.8 149 75.2
BcaB06g29576 Brassica carinata HOM05D003434 ORTHO05D004465 3.4e-64 250.4 138 78.3
Carub.0001s4208 Capsella rubella HOM05D003434 ORTHO05D004465 4.5e-64 250.0 138 78.3
Duzib213G0358 Durio zibethinus HOM05D003434 ORTHO05D004465 4.5e-64 250.0 139 77.7
Sabra11G0108200 Salix brachista HOM05D003434 ORTHO05D002822 4.5e-64 250.0 139 79.1
BcaC01g03873 Brassica carinata HOM05D003434 ORTHO05D004465 5.8e-64 249.6 138 77.5
A03p39310 Brassica napus HOM05D003434 ORTHO05D004465 5.8e-64 249.6 138 77.5
C03p47690 Brassica napus HOM05D003434 ORTHO05D004465 5.8e-64 249.6 138 77.5
BolC3t17044H Brassica oleracea HOM05D003434 ORTHO05D004465 5.8e-64 249.6 138 77.5
BraA03t13081Z Brassica rapa HOM05D003434 ORTHO05D004465 5.8e-64 249.6 138 77.5
FvH4_3g20570 Fragaria vesca HOM05D003434 ORTHO05D004465 5.8e-64 249.6 139 79.1
Gohir.A11G282773 Gossypium hirsutum HOM05D003434 ORTHO05D004465 5.8e-64 249.6 139 77.7
Gohir.D11G296500 Gossypium hirsutum HOM05D003434 ORTHO05D004465 5.8e-64 249.6 139 77.7
Hma1.2p1_1789F.1_g302480 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 5.8e-64 249.6 139 77.0
Sc21g0001090 Simmondsia chinensis HOM05D003434 ORTHO05D004465 5.8e-64 249.6 139 78.4
vmacro11838 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 7.6e-64 249.2 137 78.8
vmacro19412 Vaccinium macrocarpon HOM05D003434 ORTHO05D004465 7.6e-64 249.2 137 78.8
VMungo1383G3569 Vigna mungo HOM05D003434 ORTHO05D004465 7.6e-64 249.2 139 79.1
A01p38760 Brassica napus HOM05D003434 ORTHO05D004465 1.0e-63 248.8 138 77.5
BraA01t03909Z Brassica rapa HOM05D003434 ORTHO05D004465 1.0e-63 248.8 138 77.5
Carub.0003s1518 Capsella rubella HOM05D003434 ORTHO05D004465 1.0e-63 248.8 138 78.3
Medtr1g012990 Medicago truncatula HOM05D003434 ORTHO05D004465 1.0e-63 248.8 139 78.4
Prupe.4G185500 Prunus persica HOM05D003434 ORTHO05D004465 1.0e-63 248.8 139 77.7
CARHR043150 Cardamine hirsuta HOM05D003434 ORTHO05D004465 1.3e-63 248.4 138 78.3
MELO3C015338.2 Cucumis melo HOM05D003434 ORTHO05D004465 1.3e-63 248.4 139 78.4
Gorai.007G319600 Gossypium raimondii HOM05D003434 ORTHO05D004465 1.3e-63 248.4 135 79.3
Medtr7g069430 Medicago truncatula HOM05D003434 ORTHO05D004465 1.3e-63 248.4 139 77.7
Rhsim06G0196400 Rhododendron simsii HOM05D003434 ORTHO05D004465 1.3e-63 248.4 137 78.8
THA.LOC104815549 Tarenaya hassleriana HOM05D003434 ORTHO05D004465 1.3e-63 248.4 138 78.3
Zm00001eb245760 Zea mays HOM05D003434 ORTHO05D004465 1.3e-63 248.4 137 78.1
CsaV3_1G039130 Cucumis sativus L. HOM05D003434 ORTHO05D004465 1.7e-63 248.1 138 78.3
FAN21G0310 Fragaria x ananassa HOM05D003434 ORTHO05D004465 1.7e-63 248.1 139 77.0
COL.COLO4_09433 Corchorus olitorius HOM05D003434 ORTHO05D004465 2.2e-63 247.7 139 77.0
Hma1.2p1_2288F.1_g318950 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 2.2e-63 247.7 139 76.3
Actinidia09989 Actinidia chinensis HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 77.0
A05p33960 Brassica napus HOM05D003434 ORTHO05D004465 2.9e-63 247.3 138 76.8
BraA05t22218Z Brassica rapa HOM05D003434 ORTHO05D004465 2.9e-63 247.3 138 76.8
Cfa020548 Carpinus fangiana HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 78.4
Haze_09473 Corylus avellana HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 78.4
Haze_09477 Corylus avellana HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 78.4
RcHm_v2.0_Chr5g0034581 Rosa chinensis HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 77.7
Hund24214 Selenicereus undatus HOM05D003434 ORTHO05D004465 2.9e-63 247.3 139 77.7
Aa31LG8G2690 Aethionema arabicum HOM05D003434 ORTHO05D004465 3.8e-63 246.9 138 77.5
ClCG01G010880 Citrullus lanatus HOM05D003434 ORTHO05D004465 3.8e-63 246.9 139 77.7
MD11G1241800 Malus domestica HOM05D003434 ORTHO05D004465 3.8e-63 246.9 139 77.0
Manes.12G076100 Manihot esculenta HOM05D003434 ORTHO05D004465 3.8e-63 246.9 139 77.0
Sed0008309 Sechium edule HOM05D003434 ORTHO05D004465 3.8e-63 246.9 139 77.7
Sed0012815 Sechium edule HOM05D003434 ORTHO05D004465 3.8e-63 246.9 139 77.7
C05p51700 Brassica napus HOM05D003434 ORTHO05D004465 4.9e-63 246.5 138 76.8
CARHR090510 Cardamine hirsuta HOM05D003434 ORTHO05D004465 4.9e-63 246.5 138 77.5
CDE04G2177 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 4.9e-63 246.5 134 79.9
AUR62017579 Chenopodium quinoa HOM05D003434 ORTHO05D004465 4.9e-63 246.5 139 77.7
FAN25G0934 Fragaria x ananassa HOM05D003434 ORTHO05D004465 4.9e-63 246.5 139 77.0
AL1G61260 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 6.5e-63 246.1 138 76.8
ClCG03G016840 Citrullus lanatus HOM05D003434 ORTHO05D004465 6.5e-63 246.1 135 79.3
FAN16G2559 Fragaria x ananassa HOM05D003434 ORTHO05D004465 6.5e-63 246.1 139 77.0
Glyma.02G114000 Glycine max HOM05D003434 ORTHO05D004465 6.5e-63 246.1 139 76.3
Phvul.001G137900 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 6.5e-63 246.1 139 77.0
Aa31LG10G2140 Aethionema arabicum HOM05D003434 ORTHO05D004465 8.4e-63 245.7 138 77.5
BolC5t33857H Brassica oleracea HOM05D003434 ORTHO05D004465 8.4e-63 245.7 139 77.7
CiPaw.11G173200 Carya illinoinensis HOM05D003434 ORTHO05D004465 1.1e-62 245.4 139 77.0
HanXRQChr10g0306991 Helianthus annuus HOM05D003434 ORTHO05D004465 1.1e-62 245.4 139 77.0
HanXRQChr12g0374331 Helianthus annuus HOM05D003434 ORTHO05D004465 1.1e-62 245.4 139 77.0
Lj8A158G80 Lonicera japonica HOM05D003434 ORTHO05D004465 1.1e-62 245.4 139 78.4
Lsat_1_v5_gn_7_105060 Lactuca sativa HOM05D003434 ORTHO05D004465 1.4e-62 245.0 139 77.0
Lsat_1_v5_gn_9_57521 Lactuca sativa HOM05D003434 ORTHO05D004465 1.4e-62 245.0 139 77.0
Haze_07077 Corylus avellana HOM05D003434 ORTHO05D004465 1.9e-62 244.6 139 77.0
ECA236G4345 Erigeron canadensis HOM05D003434 ORTHO05D004465 1.9e-62 244.6 139 77.0
Phvul.008G022950 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.9e-62 244.6 139 76.3
Phvul.011G077301 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 1.9e-62 244.6 139 76.3
AUR62015117 Chenopodium quinoa HOM05D003434 ORTHO05D004465 2.5e-62 244.2 139 77.0
AT1G52930 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 3.2e-62 243.8 138 76.1
AL3G28010 Arabidopsis lyrata HOM05D003434 ORTHO05D004465 4.2e-62 243.4 138 77.5
Phvul.008G023000 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 5.5e-62 243.0 134 78.4
BcaC09g48510 Brassica carinata HOM05D003434 ORTHO05D004465 9.3e-62 242.3 132 79.5
Lj1A848T59 Lonicera japonica HOM05D003434 ORTHO05D004465 9.3e-62 242.3 139 76.3
Eucgr.F01099 Eucalyptus grandis HOM05D003434 ORTHO05D004465 1.6e-61 241.5 139 75.5
ATR0605G144 Amborella trichopoda HOM05D003434 ORTHO05D004465 2.1e-61 241.1 139 77.0
AT3G15460 Arabidopsis thaliana HOM05D003434 ORTHO05D004465 2.1e-61 241.1 138 76.8
CiPaw.12G120800 Carya illinoinensis HOM05D003434 ORTHO05D004465 2.1e-61 241.1 139 75.5
DCAR_019543 Daucus carota HOM05D003434 ORTHO05D004465 2.1e-61 241.1 137 75.9
MBI01_g15748_MAGBIO Magnolia biondii HOM05D003434 ORTHO05D004465 3.5e-61 240.4 137 78.8
Nitab4.5_0000677g0140 Nicotiana tabacum HOM05D003434 ORTHO05D004465 3.5e-61 240.4 138 75.4
PGR083G2248 Punica granatum HOM05D003434 ORTHO05D004465 3.5e-61 240.4 139 75.5
Aqoxy4G01062 Aquilegia oxysepala HOM05D003434 ORTHO05D004465 4.6e-61 240.0 139 74.8
PSO017G4384 Papaver somniferum HOM05D003434 ORTHO05D004465 4.6e-61 240.0 137 74.5
PSO170G0766 Papaver somniferum HOM05D003434 ORTHO05D004465 6.0e-61 239.6 137 73.7
PSO210G2253 Papaver somniferum HOM05D003434 ORTHO05D004465 7.9e-61 239.2 137 73.7
PSO832G4191 Papaver somniferum HOM05D003434 ORTHO05D004465 7.9e-61 239.2 137 73.7
CANSAT78G2387 Cannabis sativa HOM05D003434 ORTHO05D004465 1.0e-60 238.8 139 75.5
SGA_v2.0_scaffold9G04937 Striga asiatica HOM05D003434 ORTHO05D004465 2.3e-60 237.7 140 75.7
Hma1.2p1_0400F.1_g144660 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.1e-59 235.3 165 64.8
Hma1.2p1_3282F.1_g334840 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.1e-59 235.3 165 64.8
Nitab4.5_0000826g0070 Nicotiana tabacum HOM05D003434 ORTHO05D004465 1.1e-59 235.3 139 73.4
SEGI_09483 Sequoiadendron giganteum HOM05D003434 ORTHO05D004465 1.1e-59 235.3 139 77.0
Nitab4.5_0001618g0180 Nicotiana tabacum HOM05D003434 ORTHO05D004465 1.5e-59 235.0 139 72.7
Oeu011677.2 Olea europaea HOM05D003434 ORTHO05D004465 3.3e-59 233.8 139 71.9
BolC1t04864H Brassica oleracea HOM05D003434 ORTHO05D004465 4.3e-59 233.4 131 77.1
Oeu019344.1 Olea europaea HOM05D003434 ORTHO05D004465 4.3e-59 233.4 139 73.4
Cc05_g12350 Coffea canephora HOM05D003434 ORTHO05D004465 5.7e-59 233.0 139 72.7
Peaxi162Scf00069g00118 Petunia axillaris HOM05D003434 ORTHO05D004465 9.7e-59 232.3 139 74.1
Peaxi162Scf00130g00826 Petunia axillaris HOM05D003434 ORTHO05D004465 9.7e-59 232.3 135 74.8
PGSC0003DMG400012714 Solanum tuberosum HOM05D003434 ORTHO05D004465 2.8e-58 230.7 136 73.5
CAN.G1237.13 Capsicum annuum HOM05D003434 ORTHO05D004465 3.7e-58 230.3 140 72.1
Sopen04g008470 Solanum pennellii HOM05D003434 ORTHO05D004465 6.3e-58 229.6 136 72.8
EL10Ac9g22818 Beta vulgaris HOM05D003434 ORTHO05D004465 1.4e-57 228.4 161 65.2
SalBow4G3038 Salvia bowleyana HOM05D003434 ORTHO05D004465 1.4e-57 228.4 140 72.1
SalBow6G7052 Salvia bowleyana HOM05D003434 ORTHO05D004465 1.4e-57 228.4 140 72.9
Solyc04g016380.3 Solanum lycopersicum HOM05D003434 ORTHO05D004465 2.4e-57 227.6 136 72.1
Hma1.2p1_0687F.1_g203600 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 2.6e-56 224.2 171 60.2
unitig_0.g2416 Utricularia gibba HOM05D003434 ORTHO05D004465 3.4e-56 223.8 139 71.2
DCAR_020982 Daucus carota HOM05D003434 ORTHO05D004465 5.9e-56 223.0 138 68.8
QL08p019759 Quercus lobata HOM05D003434 ORTHO05D004465 8.8e-52 209.1 179 57.5
Nn1g07032 Nelumbo nucifera HOM05D003434 ORTHO05D004465 3.1e-49 200.7 115 75.7
Psat6g129960 Pisum sativum HOM05D003434 ORTHO05D004465 3.1e-49 200.7 115 75.7
Pp3c16_10600 Physcomitrium patens HOM05D003434 ORTHO05D004465 2.6e-48 197.6 137 64.2
AagrBONN_evm.TU.Sc2ySwM_344.2838 Anthoceros agrestis HOM05D003434 ORTHO05D004465 1.1e-46 192.2 139 61.2
Mapoly0044s0007 Marchantia polymorpha HOM05D003434 ORTHO05D004465 3.2e-46 190.7 141 61.0
SMO353G0304 Selaginella moellendorffii HOM05D003434 ORTHO05D004465 6.1e-45 186.4 134 59.7
FAN11G3195 Fragaria x ananassa HOM05D003434 ORTHO05D004465 7.9e-45 186.0 97 80.4
Zm00001eb183430 Zea mays HOM05D003434 ORTHO05D004465 8.8e-44 182.6 99 80.8
CBR_g29800 Chara braunii HOM05D003434 ORTHO05D004465 1.1e-43 182.2 136 56.6
Ah.01g001850 Amaranthus hybridus HOM05D003434 ORTHO05D004465 2.0e-43 181.4 139 59.7
Hma1.2p1_1415F.1_g281950 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 2.4e-41 174.5 101 75.2
Migut.H01924 Erythranthe guttata HOM05D003434 ORTHO05D004465 3.1e-41 174.1 101 76.2
Gohir.A04G028400 Gossypium hirsutum HOM05D003434 ORTHO05D004465 3.5e-40 170.6 99 75.8
TAR624G0430 Trochodendron aralioides HOM05D003434 ORTHO05D004465 7.7e-40 169.5 139 59.0
Cre02.g095400 Chlamydomonas reinhardtii HOM05D003434 ORTHO05D004465 1.8e-33 148.3 137 48.9
Hma1.2p1_3286F.1_g334890 Hydrangea macrophylla HOM05D003434 ORTHO05D004465 1.0e-31 142.5 129 55.0
MCO15G262 Micromonas commoda HOM05D003434 ORTHO05D004465 6.1e-29 133.3 133 51.1
Phvul.001G137800 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 4.4e-27 127.1 70 78.6
Phvul.001G138125 Phaseolus vulgaris HOM05D003434 ORTHO05D004465 4.4e-27 127.1 70 78.6
PRCOL_00005895 Prasinoderma coloniale HOM05D003434 ORTHO05D004465 3.1e-25 120.9 138 42.8
CDE04G2432 Ceratophyllum demersum HOM05D003434 ORTHO05D004465 2.7e-21 107.8 51 90.2
C01p42100 Brassica napus HOM05D003434 ORTHO05D016087 2.6e-19 101.3 59 74.6
BcaC01g02821 Brassica carinata HOM05D003434 ORTHO05D032192 2.2e-18 98.2 59 72.9
BcaC01g02922 Brassica carinata HOM05D003434 ORTHO05D032192 6.3e-18 96.7 59 71.2
C03p58350 Brassica napus HOM05D003434 ORTHO05D032192 6.3e-18 96.7 59 71.2
Cfa025477 Carpinus fangiana HOM05D003434 ORTHO05D004465 1.6e-16 92.0 138 34.8
SalBow6G0562 Salvia bowleyana HOM05D003434 ORTHO05D359170 8.6e-15 86.3 59 64.4
Sabra16G0264800 Salix brachista HOM05D003434 ORTHO05D004465 7.5e-11 73.2 41 73.2
HPP92_020076 Vanilla planifolia HOM05D000320 ORTHO05D000532 1.1e-09 69.3 74 56.8
CsaV3_5G020630 Cucumis sativus L. HOM05D003434 ORTHO05D004465 3.2e-09 67.8 42 64.3
Haze_26676 Corylus avellana HOM05D003434 ORTHO05D004465 7.0e-09 66.6 134 32.8
QL03p010098 Quercus lobata HOM05D003434 ORTHO05D037449 1.5e-06 58.9 35 77.1


User provided reference genes

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