Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.8e-193 679.1 354 100.0
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 3.0e-119 432.6 551 51.5
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.6e-48 196.4 242 47.1
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 4.7e-48 196.1 246 47.6
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.8e-47 194.1 212 50.9
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 1.8e-47 194.1 238 47.9
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 2.3e-47 193.7 237 46.4
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 2.3e-47 193.7 238 46.6
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 5.2e-47 192.6 216 50.9
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.2e-46 191.4 236 46.2
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 2.0e-46 190.7 219 47.5
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 4.4e-46 189.5 248 46.0
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 5.8e-46 189.1 219 48.4
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 2.2e-45 187.2 219 50.7
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 3.7e-45 186.4 241 44.4
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.1e-44 184.9 221 48.4
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 7.0e-44 182.2 217 47.5
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 1.2e-43 181.4 218 47.7
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.0e-43 180.6 218 47.2
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 4.6e-43 179.5 237 45.6
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 4.6e-43 179.5 246 41.1
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 4.6e-43 179.5 245 43.3
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.0e-43 179.1 214 47.2
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.0e-42 178.3 218 47.2
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 5.0e-42 176.0 212 45.3
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 6.6e-42 175.6 218 46.3
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 6.6e-42 175.6 213 46.5
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 6.6e-42 175.6 210 45.7
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 6.6e-42 175.6 243 41.6
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.1e-41 174.9 243 42.4
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.5e-41 174.5 217 44.7
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 2.5e-41 173.7 222 42.8
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 4.3e-41 172.9 215 47.0
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 7.3e-41 172.2 216 46.3
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 1.2e-40 171.4 228 44.7
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 1.6e-40 171.0 214 46.3
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 2.1e-40 170.6 215 46.5
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 2.8e-40 170.2 241 43.2
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 2.8e-40 170.2 210 45.7
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 4.7e-40 169.5 222 42.8
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 4.7e-40 169.5 226 43.8
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 6.2e-40 169.1 228 42.5
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 6.2e-40 169.1 210 44.3
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 6.2e-40 169.1 249 41.4
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 6.2e-40 169.1 226 43.8
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 8.0e-40 168.7 213 44.1
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 8.0e-40 168.7 214 44.4
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 8.0e-40 168.7 211 45.5
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 8.0e-40 168.7 214 45.8
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.1e-39 168.3 216 44.4
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.4e-39 167.9 226 44.2
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 1.8e-39 167.5 219 43.4
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 2.3e-39 167.2 238 42.0
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 3.1e-39 166.8 213 45.1
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 5.2e-39 166.0 209 44.5
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 5.2e-39 166.0 213 44.6
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 6.8e-39 165.6 243 41.2
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 1.2e-38 164.9 248 42.7
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.2e-38 164.9 211 44.1
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.5e-38 164.5 218 42.7
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.0e-38 164.1 217 42.4
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 2.0e-38 164.1 236 41.9
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 2.0e-38 164.1 215 43.7
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 7.5e-38 162.2 217 42.9
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 9.8e-38 161.8 217 42.4
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.7e-37 161.0 215 41.9
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 2.2e-37 160.6 216 44.0
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 2.9e-37 160.2 213 41.3
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 3.7e-37 159.8 220 42.7
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.7e-37 159.8 220 42.7
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.7e-37 159.8 220 42.7
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 4.9e-37 159.5 244 36.9
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 4.9e-37 159.5 244 36.9
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.9e-37 159.5 220 42.7
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 4.9e-37 159.5 236 41.9
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 6.4e-37 159.1 215 39.5
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 8.3e-37 158.7 210 43.3
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 2.4e-36 157.1 245 36.7
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 2.4e-36 157.1 213 43.7
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 3.2e-36 156.8 206 43.7
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 4.1e-36 156.4 245 36.3
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 4.1e-36 156.4 245 36.3
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 9.2e-36 155.2 280 35.7
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 9.2e-36 155.2 216 45.8
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 2.1e-35 154.1 219 42.9
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 2.7e-35 153.7 244 36.5
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.7e-35 153.7 215 40.9
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 3.5e-35 153.3 222 41.0
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 3.5e-35 153.3 255 38.8
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 1.0e-34 151.8 215 40.0
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 5.1e-34 149.4 168 51.2
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.1e-33 148.3 130 57.7
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 1.9e-33 147.5 194 45.4
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 4.3e-33 146.4 215 39.1
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 1.6e-32 144.4 244 35.7
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 8.9e-31 138.7 244 34.0
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 8.9e-31 138.7 237 37.1
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.2e-30 138.3 221 40.3
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 1.5e-30 137.9 213 37.1
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 1.5e-30 137.9 311 31.8
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 2.9e-29 133.7 242 37.6
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.4e-28 131.3 192 41.1
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 9.2e-28 128.6 223 36.8
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.8e-24 117.1 166 43.4
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 8.1e-24 115.5 237 33.3
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 1.1e-23 115.2 171 40.9
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 1.3e-21 108.2 234 31.6
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.2e-21 107.5 224 33.9
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 3.8e-21 106.7 167 42.5
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.3e-18 98.2 218 30.7
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 5.1e-18 96.3 112 46.4
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 1.5e-17 94.7 103 48.5
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 4.3e-17 93.2 201 34.8
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 1.2e-16 91.7 151 39.1
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 1.2e-16 91.7 117 44.4
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 3.1e-15 87.0 179 33.0
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.6e-14 84.0 286 28.7
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 9.9e-14 82.0 64 59.4
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.7e-11 73.9 64 53.1
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.7e-11 73.9 64 53.1
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.5e-11 73.6 64 53.1
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 4.3e-09 66.6 64 48.4
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 1.6e-08 64.7 68 52.9
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 3.6e-08 63.5 64 45.3
C03p17190 Brassica napus HOM05D001640 ORTHO05D001612 1.2e-06 58.5 96 40.6
BolC3t14133H Brassica oleracea HOM05D001640 ORTHO05D001612 1.2e-06 58.5 72 45.8


User provided reference genes

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