Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 6.4e-140 500.7 254 100.0
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.1e-126 456.8 241 95.9
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.8e-50 203.0 247 48.6
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 5.2e-49 198.7 239 48.1
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 1.2e-48 197.6 247 48.2
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 2.0e-48 196.8 254 45.3
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 3.4e-48 196.1 239 49.0
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 5.8e-48 195.3 239 48.1
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 7.5e-48 194.9 236 47.0
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 7.5e-48 194.9 239 48.5
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 9.8e-48 194.5 240 49.6
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 9.8e-48 194.5 238 49.2
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 1.3e-47 194.1 239 48.5
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 1.7e-47 193.7 232 48.7
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 2.2e-47 193.4 249 45.4
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 3.7e-47 192.6 255 46.7
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 3.7e-47 192.6 255 46.7
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 3.7e-47 192.6 249 46.6
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 6.4e-47 191.8 235 48.9
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 1.4e-46 190.7 241 49.4
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 1.4e-46 190.7 241 50.2
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 1.9e-46 190.3 236 47.9
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 4.1e-46 189.1 234 49.1
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 5.4e-46 188.7 231 47.6
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.0e-46 188.3 249 47.4
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 9.2e-46 188.0 239 46.9
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 9.2e-46 188.0 238 45.0
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 9.2e-46 188.0 245 48.6
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 9.2e-46 188.0 244 46.3
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 1.2e-45 187.6 238 46.2
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 1.6e-45 187.2 236 45.8
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 1.6e-45 187.2 241 48.1
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 2.0e-45 186.8 248 46.0
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 2.0e-45 186.8 247 44.1
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 2.0e-45 186.8 234 47.0
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 2.7e-45 186.4 248 46.0
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 2.7e-45 186.4 243 46.5
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 2.7e-45 186.4 238 46.6
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 3.5e-45 186.0 238 45.0
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 4.6e-45 185.7 254 43.7
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 4.6e-45 185.7 229 48.0
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 4.6e-45 185.7 233 47.2
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.6e-45 185.7 231 45.9
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 1.0e-44 184.5 251 45.4
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.3e-44 184.1 238 46.6
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.3e-44 184.1 238 46.6
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 2.3e-44 183.3 244 46.7
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 2.3e-44 183.3 234 47.4
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 3.0e-44 183.0 232 45.7
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 3.9e-44 182.6 234 45.7
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 8.6e-44 181.4 241 46.1
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 8.6e-44 181.4 244 46.3
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 1.1e-43 181.0 243 45.7
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 1.1e-43 181.0 238 46.2
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 1.1e-43 181.0 234 46.6
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.5e-43 180.6 234 47.0
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 1.5e-43 180.6 229 45.4
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.5e-43 180.6 281 42.0
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 1.9e-43 180.3 255 41.2
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 1.9e-43 180.3 229 46.3
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.9e-43 180.3 228 45.2
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 2.5e-43 179.9 244 46.7
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 2.5e-43 179.9 254 45.3
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 3.3e-43 179.5 244 44.3
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 3.3e-43 179.5 231 47.2
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 4.3e-43 179.1 229 46.3
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 4.3e-43 179.1 229 46.3
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 4.3e-43 179.1 246 43.1
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 5.6e-43 178.7 229 46.7
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 5.6e-43 178.7 236 45.8
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 7.3e-43 178.3 234 47.4
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 7.3e-43 178.3 238 45.0
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 7.3e-43 178.3 251 43.8
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 9.5e-43 177.9 242 45.5
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 9.5e-43 177.9 236 46.6
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 9.5e-43 177.9 232 46.1
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 9.5e-43 177.9 232 46.6
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 9.5e-43 177.9 238 45.8
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 9.5e-43 177.9 225 48.4
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.2e-42 177.6 229 45.4
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 1.6e-42 177.2 238 45.8
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 2.1e-42 176.8 269 42.8
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 2.8e-42 176.4 249 44.6
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.6e-42 176.0 238 44.1
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 3.6e-42 176.0 243 45.3
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 6.2e-42 175.3 244 44.3
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 8.1e-42 174.9 233 47.2
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 1.1e-41 174.5 238 43.7
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.1e-41 174.5 238 43.7
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.4e-41 174.1 230 46.5
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 1.8e-41 173.7 244 45.1
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 5.2e-41 172.2 223 48.4
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 6.8e-41 171.8 223 48.4
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 2.0e-40 170.2 240 43.8
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 2.6e-40 169.9 96 83.3
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 2.6e-40 169.9 238 42.9
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 3.4e-40 169.5 96 82.3
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 7.5e-40 168.3 253 44.7
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 2.2e-39 166.8 131 67.2
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 6.4e-39 165.2 131 66.4
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 6.4e-39 165.2 249 41.8
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 4.1e-38 162.5 131 64.9
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 1.7e-36 157.1 258 39.9
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 9.5e-35 151.4 121 62.0
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.1e-34 150.2 228 43.0
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.6e-32 143.3 223 42.6
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 4.9e-31 139.0 219 42.9
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 4.6e-29 132.5 256 35.9
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 4.6e-29 132.5 215 40.0
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 1.9e-27 127.1 211 41.7
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.5e-27 126.7 230 38.3
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 3.3e-27 126.3 231 39.4
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 3.6e-26 122.9 96 59.4
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 3.1e-25 119.8 97 60.8
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.7e-15 87.4 256 27.0
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.5e-11 73.6 227 24.7
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 4.8e-10 69.3 172 32.0
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 9.0e-09 65.1 234 26.9
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 4.9e-07 59.3 34 79.4
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 2.4e-06 57.0 97 38.1


User provided reference genes

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