Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016852 Vanilla planifolia HOM05D005655 ORTHO05D007386 3.2e-93 345.1 180 100.0
HPP92_027830 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.1e-66 256.9 147 91.8
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 1.6e-23 113.6 169 43.8
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 2.0e-23 113.2 165 40.6
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 4.5e-23 112.1 178 42.1
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 2.3e-22 109.8 167 40.7
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 2.5e-21 106.3 163 39.9
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 2.5e-21 106.3 164 40.2
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 4.3e-21 105.5 165 40.6
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 5.6e-21 105.1 150 44.0
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 7.3e-21 104.8 161 39.8
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 1.2e-20 104.0 164 41.5
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 1.6e-20 103.6 168 40.5
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 1.6e-20 103.6 151 40.4
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 1.6e-20 103.6 174 41.4
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 2.1e-20 103.2 176 40.9
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 2.1e-20 103.2 176 40.9
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 2.8e-20 102.8 164 41.5
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 2.8e-20 102.8 171 42.1
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 2.8e-20 102.8 167 40.1
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 3.6e-20 102.4 168 40.5
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 4.7e-20 102.1 168 39.9
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 6.1e-20 101.7 165 38.8
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 6.1e-20 101.7 151 38.4
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 2.3e-19 99.8 156 41.0
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 3.0e-19 99.4 164 41.5
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 4.0e-19 99.0 160 41.2
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 5.2e-19 98.6 164 39.6
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 6.8e-19 98.2 164 37.2
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 6.8e-19 98.2 151 38.4
Lalb_Chr02g0141641 Lupinus albus HOM05D005655 ORTHO05D007386 6.8e-19 98.2 151 40.4
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 8.9e-19 97.8 151 39.1
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 8.9e-19 97.8 178 38.8
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 8.9e-19 97.8 173 39.3
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 1.2e-18 97.4 171 36.8
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 1.2e-18 97.4 151 37.7
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.2e-18 97.4 161 39.1
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 1.2e-18 97.4 164 41.5
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 1.5e-18 97.1 151 39.1
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.5e-18 97.1 161 38.5
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 2.0e-18 96.7 160 41.2
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 2.0e-18 96.7 163 40.5
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 2.0e-18 96.7 155 38.7
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 2.0e-18 96.7 161 37.9
CARHR033660 Cardamine hirsuta HOM05D005655 ORTHO05D007386 2.6e-18 96.3 160 37.5
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 3.4e-18 95.9 165 37.0
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 4.4e-18 95.5 172 40.1
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 4.4e-18 95.5 157 38.2
Eucgr.I00104 Eucalyptus grandis HOM05D005655 ORTHO05D007386 4.4e-18 95.5 158 39.9
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 4.4e-18 95.5 166 41.0
Eucgr.J00222 Eucalyptus grandis HOM05D005655 ORTHO05D007386 5.7e-18 95.1 157 38.9
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 7.5e-18 94.7 155 40.6
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 7.5e-18 94.7 166 38.0
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 9.8e-18 94.4 164 37.2
MD05G1036800 Malus domestica HOM05D005655 ORTHO05D007386 1.3e-17 94.0 92 56.5
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 1.3e-17 94.0 166 36.7
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.7e-17 93.6 157 40.8
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 1.7e-17 93.6 173 38.2
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 2.2e-17 93.2 165 38.2
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 2.2e-17 93.2 59 72.9
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 2.2e-17 93.2 159 39.0
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 2.2e-17 93.2 161 37.3
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 2.9e-17 92.8 157 41.4
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 2.9e-17 92.8 157 41.4
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 2.9e-17 92.8 165 37.6
Actinidia17755 Actinidia chinensis HOM05D005655 ORTHO05D007386 3.7e-17 92.4 170 36.5
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 3.7e-17 92.4 157 37.6
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 4.9e-17 92.0 155 40.0
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 4.9e-17 92.0 155 40.0
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 6.4e-17 91.7 161 39.1
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 6.4e-17 91.7 176 37.5
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 1.1e-16 90.9 59 72.9
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 1.4e-16 90.5 155 40.0
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 2.4e-16 89.7 168 36.3
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 3.2e-16 89.4 191 37.2
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 5.4e-16 88.6 101 46.5
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 5.4e-16 88.6 150 39.3
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 9.2e-16 87.8 53 75.5
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 3.5e-15 85.9 158 37.3
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 4.6e-15 85.5 53 73.6
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 4.6e-15 85.5 167 34.1
Sc13g0008190 Simmondsia chinensis HOM05D005655 ORTHO05D007386 5.9e-15 85.1 164 36.0
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 2.3e-14 83.2 161 37.3
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 6.6e-14 81.6 156 37.2
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 1.5e-13 80.5 166 35.5
SHI09122 Sapria himalayana HOM05D005655 ORTHO05D007386 1.5e-13 80.5 187 35.8
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 1.9e-13 80.1 205 34.1
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 2.5e-13 79.7 157 38.2
Eucgr.F00074 Eucalyptus grandis HOM05D005655 ORTHO05D007386 7.3e-13 78.2 77 53.2
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 9.5e-13 77.8 161 33.5
unitig_21.g20592 Utricularia gibba HOM05D005655 ORTHO05D007386 2.1e-12 76.6 53 62.3
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 2.8e-12 76.3 162 35.2
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 3.6e-12 75.9 160 35.0
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 8.9e-11 71.2 152 32.9
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 2.0e-10 70.1 45 71.1
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 4.9e-09 65.5 73 47.9
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 6.4e-09 65.1 233 29.6
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 1.4e-08 63.9 233 29.6
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 3.2e-08 62.8 182 29.7
SEGI_37134 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 3.2e-08 62.8 40 67.5
Thecc.09G171000 Theobroma cacao HOM05D005655 ORTHO05D007386 9.2e-08 61.2 68 48.5
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 2.0e-07 60.1 40 67.5
Psat4g128520 Pisum sativum HOM05D005655 ORTHO05D007386 4.6e-07 58.9 40 65.0
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 1.0e-06 57.8 41 58.5
Eucgr.L00427 Eucalyptus grandis HOM05D005655 ORTHO05D007386 6.6e-06 55.1 35 62.9


User provided reference genes

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