Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015811 Vanilla planifolia HOM05D001776 ORTHO05D001771 1.7e-125 452.6 221 100.0
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.3e-24 116.7 146 50.0
EL10Ac2g03640 Beta vulgaris HOM05D001776 ORTHO05D001771 8.9e-21 104.8 129 44.2
Nn8g41094 Nelumbo nucifera HOM05D001776 ORTHO05D001771 3.4e-20 102.8 114 50.0
TAR626G1512 Trochodendron aralioides HOM05D001776 ORTHO05D001771 5.8e-20 102.1 105 53.3
Nitab4.5_0005411g0070 Nicotiana tabacum HOM05D001776 ORTHO05D001771 1.3e-19 100.9 90 53.3
CAN.G106.15 Capsicum annuum HOM05D001776 ORTHO05D001771 3.7e-19 99.4 89 55.1
Thecc.09G194000 Theobroma cacao HOM05D001776 ORTHO05D001771 6.4e-19 98.6 116 45.7
GSVIVG01032322001 Vitis vinifera HOM05D001776 ORTHO05D001771 6.4e-19 98.6 137 43.1
Sopen05g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-19 98.2 89 53.9
PGSC0003DMG400013699 Solanum tuberosum HOM05D001776 ORTHO05D001771 8.3e-19 98.2 89 53.9
TAR383G0816 Trochodendron aralioides HOM05D001776 ORTHO05D001771 1.1e-18 97.8 114 48.2
Atru.chr7.974 Acer truncatum HOM05D001776 ORTHO05D001771 1.4e-18 97.4 111 45.9
HPP92_010798 Vanilla planifolia HOM05D001776 ORTHO05D001771 1.4e-18 97.4 95 51.6
Potri.018G146700 Populus trichocarpa HOM05D001776 ORTHO05D001771 1.9e-18 97.1 119 47.1
Hund19364 Selenicereus undatus HOM05D001776 ORTHO05D001771 2.4e-18 96.7 82 56.1
TWI34G1874 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 2.4e-18 96.7 91 56.0
HPP92_017094 Vanilla planifolia HOM05D001776 ORTHO05D001771 2.4e-18 96.7 106 46.2
MBI13_g34294_MAGBIO Magnolia biondii HOM05D001776 ORTHO05D001771 3.2e-18 96.3 117 47.9
Actinidia02483 Actinidia chinensis HOM05D001776 ORTHO05D001771 4.1e-18 95.9 93 55.9
Actinidia38521 Actinidia chinensis HOM05D001776 ORTHO05D001771 4.1e-18 95.9 106 45.3
Dinv26467 Davidia involucrata HOM05D001776 ORTHO05D001771 5.4e-18 95.5 85 58.8
Glyma.01G002200 Glycine max HOM05D001776 ORTHO05D001771 5.4e-18 95.5 116 44.8
Hma1.2p1_0284F.1_g113830 Hydrangea macrophylla HOM05D001776 ORTHO05D001771 5.4e-18 95.5 78 61.5
MSTRG.10463 Avicennia marina HOM05D001776 ORTHO05D001771 7.1e-18 95.1 102 47.1
Glyma.07G130300 Glycine max HOM05D001776 ORTHO05D001771 7.1e-18 95.1 116 44.8
CANSAT80G0007 Cannabis sativa HOM05D001776 ORTHO05D001771 9.2e-18 94.7 95 52.6
Dinv12597 Davidia involucrata HOM05D001776 ORTHO05D001771 9.2e-18 94.7 97 54.6
TWI32G0050 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 1.2e-17 94.4 98 51.0
AUR62028014 Chenopodium quinoa HOM05D001776 ORTHO05D001771 1.6e-17 94.0 94 51.1
Phvul.004G177500 Phaseolus vulgaris HOM05D001776 ORTHO05D001771 1.6e-17 94.0 116 43.1
Potri.018G145500 Populus trichocarpa HOM05D001776 ORTHO05D001771 1.6e-17 94.0 122 48.4
vmacro22291 Vaccinium macrocarpon HOM05D001776 ORTHO05D001771 1.6e-17 94.0 104 48.1
Ah.11g044270 Amaranthus hybridus HOM05D001776 ORTHO05D001771 2.1e-17 93.6 82 53.7
Ciclev10008843m.g Citrus clementina HOM05D001776 ORTHO05D001771 2.1e-17 93.6 101 47.5
PGR142G2549 Punica granatum HOM05D001776 ORTHO05D001771 2.1e-17 93.6 141 38.3
Rhsim03G0268500 Rhododendron simsii HOM05D001776 ORTHO05D001771 2.7e-17 93.2 104 48.1
SalBow6G0354 Salvia bowleyana HOM05D001776 ORTHO05D001771 2.7e-17 93.2 107 44.9
Sed0013888 Sechium edule HOM05D001776 ORTHO05D001771 2.7e-17 93.2 119 44.5
ClCG11G011500 Citrullus lanatus HOM05D001776 ORTHO05D001771 3.5e-17 92.8 94 50.0
Eucgr.C00067 Eucalyptus grandis HOM05D001776 ORTHO05D001771 3.5e-17 92.8 94 52.1
THA.LOC104815317 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 3.5e-17 92.8 101 44.6
Aqoxy7G02693 Aquilegia oxysepala HOM05D001776 ORTHO05D001771 4.6e-17 92.4 53 75.5
Hma1.2p1_0314F.1_g121970 Hydrangea macrophylla HOM05D001776 ORTHO05D001771 4.6e-17 92.4 112 44.6
Nn2g12782 Nelumbo nucifera HOM05D001776 ORTHO05D001771 4.6e-17 92.4 92 52.2
COL.COLO4_33454 Corchorus olitorius HOM05D001776 ORTHO05D001771 6.0e-17 92.0 97 50.5
FvH4_4g06240 Fragaria vesca HOM05D001776 ORTHO05D001771 6.0e-17 92.0 106 48.1
FAN07G0851 Fragaria x ananassa HOM05D001776 ORTHO05D001771 6.0e-17 92.0 106 48.1
FAN12G2880 Fragaria x ananassa HOM05D001776 ORTHO05D001771 6.0e-17 92.0 107 48.6
FAN17G1350 Fragaria x ananassa HOM05D001776 ORTHO05D001771 6.0e-17 92.0 106 48.1
Potri.006G077600 Populus trichocarpa HOM05D001776 ORTHO05D001771 6.0e-17 92.0 117 46.2
Duzib168G1817 Durio zibethinus HOM05D001776 ORTHO05D001771 7.8e-17 91.7 120 45.0
FAN22G1406 Fragaria x ananassa HOM05D001776 ORTHO05D001771 7.8e-17 91.7 106 47.2
Nitab4.5_0000413g0060 Nicotiana tabacum HOM05D001776 ORTHO05D001771 7.8e-17 91.7 90 50.0
Nitab4.5_0001205g0020 Nicotiana tabacum HOM05D001776 ORTHO05D001771 7.8e-17 91.7 90 50.0
RcHm_v2.0_Chr4g0397961 Rosa chinensis HOM05D001776 ORTHO05D001771 7.8e-17 91.7 106 48.1
Sabra06G0058700 Salix brachista HOM05D001776 ORTHO05D001771 7.8e-17 91.7 124 43.5
Carub.0007s3115 Capsella rubella HOM05D001776 ORTHO05D001771 1.0e-16 91.3 100 44.0
Oeu036947.1 Olea europaea HOM05D001776 ORTHO05D001771 1.0e-16 91.3 91 50.5
CDE04G2318 Ceratophyllum demersum HOM05D001776 ORTHO05D001771 1.3e-16 90.9 110 41.8
Gohir.A05G001300 Gossypium hirsutum HOM05D001776 ORTHO05D001771 1.3e-16 90.9 94 47.9
Gohir.D05G001600 Gossypium hirsutum HOM05D001776 ORTHO05D001771 1.3e-16 90.9 94 47.9
Gorai.009G001500 Gossypium raimondii HOM05D001776 ORTHO05D001771 1.3e-16 90.9 94 47.9
Cc00_g00460 Coffea canephora HOM05D001776 ORTHO05D001771 1.7e-16 90.5 89 51.7
PSO063G5421 Papaver somniferum HOM05D001776 ORTHO05D001771 1.7e-16 90.5 102 47.1
VMungo0464G1505 Vigna mungo HOM05D001776 ORTHO05D001771 1.7e-16 90.5 115 43.5
CSS0006410 Camellia sinensis var. sinensis HOM05D001776 ORTHO05D001771 2.3e-16 90.1 79 57.0
BcaC07g37670 Brassica carinata HOM05D001776 ORTHO05D001771 3.0e-16 89.7 88 50.0
A08p09650 Brassica napus HOM05D001776 ORTHO05D001771 3.0e-16 89.7 88 50.0
BolC8t48040H Brassica oleracea HOM05D001776 ORTHO05D001771 3.0e-16 89.7 88 50.0
BraA08t32962Z Brassica rapa HOM05D001776 ORTHO05D001771 3.0e-16 89.7 88 50.0
Cfa020736 Carpinus fangiana HOM05D001776 ORTHO05D001771 3.0e-16 89.7 107 47.7
Migut.B00848 Erythranthe guttata HOM05D001776 ORTHO05D001771 3.0e-16 89.7 88 50.0
SGA_v2.0_scaffold31G12721 Striga asiatica HOM05D001776 ORTHO05D001771 3.0e-16 89.7 107 44.9
MSTRG.26521 Avicennia marina HOM05D001776 ORTHO05D001771 3.9e-16 89.4 54 72.2
QL11p009249 Quercus lobata HOM05D001776 ORTHO05D001771 3.9e-16 89.4 114 44.7
Aa31LG9G5220 Aethionema arabicum HOM05D001776 ORTHO05D001771 5.1e-16 89.0 93 47.3
Thhalv10003457m.g Eutrema salsugineum HOM05D001776 ORTHO05D001771 5.1e-16 89.0 101 42.6
arahy.Tifrunner.gnm1.ann1.N90ILP Arachis hypogaea HOM05D001776 ORTHO05D001771 6.6e-16 88.6 114 45.6
Duzib150G1194 Durio zibethinus HOM05D001776 ORTHO05D001771 6.6e-16 88.6 111 42.3
BcaB04g18054 Brassica carinata HOM05D001776 ORTHO05D001771 8.6e-16 88.2 88 50.0
CARHR217370 Cardamine hirsuta HOM05D001776 ORTHO05D001771 1.1e-15 87.8 101 42.6
Cpa.g.sc115.32 Carica papaya HOM05D001776 ORTHO05D001771 1.1e-15 87.8 109 46.8
Manes.15G099400 Manihot esculenta HOM05D001776 ORTHO05D001771 1.1e-15 87.8 122 44.3
Sc23g0004330 Simmondsia chinensis HOM05D001776 ORTHO05D001771 1.1e-15 87.8 95 45.3
MELO3C003942.2 Cucumis melo HOM05D001776 ORTHO05D001771 1.5e-15 87.4 94 47.9
CsaV3_2G009010 Cucumis sativus L. HOM05D001776 ORTHO05D001771 1.5e-15 87.4 94 47.9
Nitab4.5_0004188g0070 Nicotiana tabacum HOM05D001776 ORTHO05D001771 1.5e-15 87.4 94 46.8
SGA_v2.0_scaffold21G09625 Striga asiatica HOM05D001776 ORTHO05D001771 1.5e-15 87.4 53 71.7
THA.LOC104808910 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 1.9e-15 87.0 56 69.6
SGA_v2.0_scaffold693G53460 Striga asiatica HOM05D001776 ORTHO05D001771 3.3e-15 86.3 94 42.6
AL7G44140 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 4.3e-15 85.9 101 42.6
CiPaw.15G155200 Carya illinoinensis HOM05D001776 ORTHO05D001771 5.6e-15 85.5 45 82.2
Ca_25630_v3 Cicer arietinum L. HOM05D001776 ORTHO05D001771 7.3e-15 85.1 85 50.6
Lalb_Chr24g0401801 Lupinus albus HOM05D001776 ORTHO05D001771 9.5e-15 84.7 111 41.4
Peaxi162Scf00320g00413 Petunia axillaris HOM05D001776 ORTHO05D001771 9.5e-15 84.7 92 44.6
Migut.K00354 Erythranthe guttata HOM05D001776 ORTHO05D001771 1.2e-14 84.3 55 69.1
Migut.K01233 Erythranthe guttata HOM05D001776 ORTHO05D001771 1.2e-14 84.3 55 69.1
Migut.K01234 Erythranthe guttata HOM05D001776 ORTHO05D001771 1.2e-14 84.3 55 69.1
TPR.G21354 Trifolium pratense HOM05D001776 ORTHO05D001771 1.2e-14 84.3 80 50.0
Medtr6g093020 Medicago truncatula HOM05D001776 ORTHO05D001771 1.6e-14 84.0 112 40.2
Oeu021032.1 Olea europaea HOM05D001776 ORTHO05D001771 1.6e-14 84.0 113 42.5
AT5G35330 Arabidopsis thaliana HOM05D001776 ORTHO05D001771 2.1e-14 83.6 101 42.6
Lj2g0010885 Lotus japonicus HOM05D001776 ORTHO05D001771 2.1e-14 83.6 104 42.3
Peaxi162Scf00954g00319 Petunia axillaris HOM05D001776 ORTHO05D001771 2.8e-14 83.2 91 49.5
Os06g0702100 Oryza sativa ssp. japonica HOM05D001776 ORTHO05D001771 4.7e-14 82.4 73 50.7
SGA_v2.0_scaffold229G43362 Striga asiatica HOM05D001776 ORTHO05D001771 6.2e-14 82.0 100 43.0
TPR.G21362 Trifolium pratense HOM05D001776 ORTHO05D001771 6.2e-14 82.0 80 47.5
Zm00001eb317100 Zea mays HOM05D001776 ORTHO05D001771 6.2e-14 82.0 103 38.8
MD16G1239500 Malus domestica HOM05D001776 ORTHO05D001771 8.1e-14 81.6 80 48.8
Prupe.1G065600 Prunus persica HOM05D001776 ORTHO05D001771 8.1e-14 81.6 53 66.0
unitig_8.g4679 Utricularia gibba HOM05D001776 ORTHO05D001771 8.1e-14 81.6 88 51.1
Lj5A743T19 Lonicera japonica HOM05D001776 ORTHO05D001771 1.8e-13 80.5 53 66.0
Os09g0494300 Oryza sativa ssp. japonica HOM05D001776 ORTHO05D001771 1.8e-13 80.5 56 60.7
unitig_899.g15185 Utricularia gibba HOM05D005244 ORTHO05D006539 1.8e-13 80.5 79 46.8
Zm00001eb102090 Zea mays HOM05D001776 ORTHO05D001771 1.8e-13 80.5 63 54.0
ECA234G3906 Erigeron canadensis HOM05D001776 ORTHO05D001771 2.3e-13 80.1 82 43.9
Oeu000375.3 Olea europaea HOM05D001776 ORTHO05D001771 3.1e-13 79.7 84 47.6
Medtr3g435470 Medicago truncatula HOM05D001776 ORTHO05D001771 5.2e-13 79.0 103 38.8
Migut.K00353 Erythranthe guttata HOM05D001776 ORTHO05D001771 6.8e-13 78.6 47 72.3
HanXRQChr12g0359211 Helianthus annuus HOM05D001776 ORTHO05D001771 1.2e-12 77.8 80 45.0
AUR62020710 Chenopodium quinoa HOM05D001776 ORTHO05D001771 1.5e-12 77.4 128 37.5
Lsat_1_v5_gn_5_82421 Lactuca sativa HOM05D001776 ORTHO05D001771 1.5e-12 77.4 85 44.7
Oeu015727.1 Olea europaea HOM05D001776 ORTHO05D001771 1.5e-12 77.4 94 42.6
Oeu052293.1 Olea europaea HOM05D001776 ORTHO05D001771 1.5e-12 77.4 118 42.4
CiPaw.16G103200 Carya illinoinensis HOM05D001776 ORTHO05D001771 3.4e-12 76.3 102 44.1
Haze_19051 Corylus avellana HOM05D001776 ORTHO05D001771 5.8e-12 75.5 48 66.7
Medtr3g435450 Medicago truncatula HOM05D001776 ORTHO05D001771 7.6e-12 75.1 103 36.9
PSO017G4274 Papaver somniferum HOM05D001776 ORTHO05D001771 7.6e-12 75.1 55 60.0
PSO478G1737 Papaver somniferum HOM05D001776 ORTHO05D001771 7.6e-12 75.1 55 60.0
SEGI_01377 Sequoiadendron giganteum HOM05D001776 ORTHO05D001771 7.6e-12 75.1 53 58.5
Oeu057461.1 Olea europaea HOM05D001776 ORTHO05D001771 9.9e-12 74.7 79 45.6
SGA_v2.0_scaffold45G17055 Striga asiatica HOM05D001776 ORTHO05D001771 2.2e-11 73.6 70 50.0
Thhalv10003468m.g Eutrema salsugineum HOM05D001776 ORTHO05D001771 2.9e-11 73.2 55 56.4
SEGI_11634 Sequoiadendron giganteum HOM05D001776 ORTHO05D001771 2.9e-11 73.2 97 40.2
Oeu015364.1 Olea europaea HOM05D001776 ORTHO05D001771 3.8e-11 72.8 45 68.9
SMO111G0066 Selaginella moellendorffii HOM05D001776 ORTHO05D001771 3.8e-11 72.8 76 42.1
HanXRQChr09g0245901 Helianthus annuus HOM05D001776 ORTHO05D001771 6.4e-11 72.0 55 50.9
ATR0626G029 Amborella trichopoda HOM05D001776 ORTHO05D001771 1.4e-10 70.9 53 50.9
HanXRQChr03g0067341 Helianthus annuus HOM05D001776 ORTHO05D001771 1.4e-10 70.9 55 50.9
Lsat_1_v5_gn_7_57621 Lactuca sativa HOM05D001776 ORTHO05D001771 1.9e-10 70.5 55 50.9
arahy.Tifrunner.gnm1.ann1.QSQE7C Arachis hypogaea HOM05D001776 ORTHO05D001771 2.4e-10 70.1 151 34.4
Medtr3g037440 Medicago truncatula HOM05D001776 ORTHO05D001771 4.1e-10 69.3 68 45.6
Oeu028810.1 Olea europaea HOM05D001776 ORTHO05D001771 4.1e-10 69.3 45 66.7
AT5G35338 Arabidopsis thaliana HOM05D001776 ORTHO05D001771 5.4e-10 68.9 76 47.4
ECA240G0360 Erigeron canadensis HOM05D001776 ORTHO05D001771 5.4e-10 68.9 55 49.1
Lalb_Chr14g0361701 Lupinus albus HOM05D001776 ORTHO05D001771 7.1e-10 68.6 46 63.0
Medtr3g037400 Medicago truncatula HOM05D008161 ORTHO05D001771 1.2e-09 67.8 55 52.7
vmacro20780 Vaccinium macrocarpon HOM05D001776 ORTHO05D001771 1.6e-09 67.4 56 60.7
AagrBONN_evm.TU.Sc2ySwM_368.1079 Anthoceros agrestis HOM05D001776 ORTHO05D001771 2.7e-09 66.6 45 60.0
PGSC0003DMG400006275 Solanum tuberosum HOM05D001776 ORTHO05D001771 2.7e-09 66.6 56 48.2
AL7G44150 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 7.8e-09 65.1 76 44.7
Actinidia31883 Actinidia chinensis HOM05D001776 ORTHO05D001771 1.3e-08 64.3 70 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3680 Anthoceros agrestis HOM05D001776 ORTHO05D001771 1.7e-08 63.9 45 62.2
Sp7g07070 Schrenkiella parvula HOM05D001776 ORTHO05D001771 1.7e-08 63.9 82 42.7
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 8.6e-08 61.6 76 42.1
CBR_g37407 Chara braunii HOM05D001776 ORTHO05D001771 1.1e-07 61.2 59 44.1
Pp3c4_4120 Physcomitrium patens HOM05D001776 ORTHO05D001771 1.9e-07 60.5 79 38.0
Oeu057450.1 Olea europaea HOM05D001776 ORTHO05D001771 4.3e-07 59.3 51 54.9
Sopen04g008850 Solanum pennellii HOM05D001776 ORTHO05D001771 4.3e-07 59.3 75 40.0
Migut.J00831 Erythranthe guttata HOM05D001776 ORTHO05D001771 2.1e-06 57.0 35 65.7
Solyc07g015930.3 Solanum lycopersicum HOM05D001776 ORTHO05D001771 2.1e-06 57.0 83 37.3
Carub.0007s3165 Capsella rubella HOM05D001776 ORTHO05D001771 3.6e-06 56.2 59 45.8
Solyc01g067965.1 Solanum lycopersicum HOM05D001776 ORTHO05D001771 8.1e-06 55.1 62 38.7


User provided reference genes

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