Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.1e-113 413.3 210 100.0
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 8.7e-42 174.5 111 75.7
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 1.2e-38 164.1 121 72.7
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.4e-38 162.5 136 65.4
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 3.4e-38 162.5 101 83.2
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 7.6e-38 161.4 139 66.9
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 1.3e-37 160.6 143 62.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.8e-37 159.1 132 66.7
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.5e-37 158.3 93 81.7
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 8.4e-37 157.9 101 79.2
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 8.4e-37 157.9 120 70.8
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.4e-36 157.1 116 74.1
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.9e-36 156.8 102 76.5
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 3.2e-36 156.0 100 80.0
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 3.2e-36 156.0 119 65.5
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 4.2e-36 155.6 100 81.0
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 5.5e-36 155.2 100 78.0
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.5e-36 155.2 100 80.0
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.5e-36 155.2 100 80.0
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 7.1e-36 154.8 104 77.9
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 7.1e-36 154.8 118 70.3
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 7.1e-36 154.8 117 70.9
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 7.1e-36 154.8 117 70.9
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 7.1e-36 154.8 103 75.7
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 7.1e-36 154.8 143 60.1
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 7.1e-36 154.8 101 77.2
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 9.3e-36 154.5 99 81.8
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 9.3e-36 154.5 100 80.0
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.2e-35 154.1 123 68.3
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 1.2e-35 154.1 100 77.0
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.2e-35 154.1 126 71.4
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 1.6e-35 153.7 100 78.0
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.6e-35 153.7 99 81.8
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 2.1e-35 153.3 104 79.8
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 2.1e-35 153.3 101 78.2
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 2.7e-35 152.9 100 79.0
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 2.7e-35 152.9 127 68.5
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 3.5e-35 152.5 99 80.8
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.5e-35 152.5 125 67.2
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 4.6e-35 152.1 103 75.7
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 7.9e-35 151.4 142 60.6
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 7.9e-35 151.4 140 62.9
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 1.0e-34 151.0 104 78.8
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.0e-34 151.0 122 68.0
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.0e-34 151.0 131 68.7
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.3e-34 150.6 136 61.8
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.3e-34 150.6 120 68.3
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.3e-34 150.6 126 65.9
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.3e-34 150.6 121 65.3
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 1.3e-34 150.6 138 59.4
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.8e-34 150.2 104 77.9
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 1.8e-34 150.2 100 77.0
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 2.3e-34 149.8 126 67.5
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 2.3e-34 149.8 127 66.9
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 3.0e-34 149.4 129 67.4
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.0e-34 149.4 103 75.7
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.0e-34 149.4 125 66.4
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.0e-34 149.4 125 66.4
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 3.0e-34 149.4 125 66.4
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 3.0e-34 149.4 104 77.9
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 3.9e-34 149.1 91 82.4
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 3.9e-34 149.1 145 57.2
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 3.9e-34 149.1 97 71.1
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 5.1e-34 148.7 100 76.0
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.1e-34 148.7 166 56.0
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 6.7e-34 148.3 100 82.0
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 6.7e-34 148.3 144 56.9
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 8.7e-34 147.9 87 85.1
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 8.7e-34 147.9 126 65.9
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 8.7e-34 147.9 99 77.8
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 8.7e-34 147.9 126 67.5
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.1e-33 147.5 100 78.0
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 1.1e-33 147.5 100 78.0
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.5e-33 147.1 99 73.7
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.9e-33 146.7 100 79.0
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.9e-33 146.7 100 76.0
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.9e-33 146.7 126 65.9
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 1.9e-33 146.7 125 67.2
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 1.9e-33 146.7 104 65.4
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.9e-33 146.7 100 76.0
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 80.0
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 2.5e-33 146.4 99 75.8
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.5e-33 146.4 100 75.0
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 3.3e-33 146.0 148 60.8
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 3.3e-33 146.0 139 61.2
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 4.3e-33 145.6 122 65.6
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 5.7e-33 145.2 100 75.0
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 5.7e-33 145.2 99 72.7
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 7.4e-33 144.8 122 68.0
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 7.4e-33 144.8 100 77.0
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 7.4e-33 144.8 100 78.0
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 7.4e-33 144.8 140 60.7
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 7.4e-33 144.8 145 56.6
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 7.4e-33 144.8 86 84.9
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 7.4e-33 144.8 100 79.0
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 9.6e-33 144.4 100 75.0
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 9.6e-33 144.4 122 64.8
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.3e-32 144.1 98 77.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.3e-32 144.1 98 77.6
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 1.3e-32 144.1 99 77.8
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.3e-32 144.1 100 79.0
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 1.3e-32 144.1 110 71.8
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.3e-32 144.1 93 77.4
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.3e-32 144.1 100 75.0
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.6e-32 143.7 99 76.8
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 1.6e-32 143.7 102 75.5
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.6e-32 143.7 99 75.8
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.6e-32 143.7 130 63.8
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 2.1e-32 143.3 100 77.0
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 2.1e-32 143.3 98 77.6
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 2.1e-32 143.3 98 77.6
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 2.1e-32 143.3 98 77.6
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 2.1e-32 143.3 98 73.5
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 2.1e-32 143.3 85 83.5
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 2.8e-32 142.9 96 76.0
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 2.8e-32 142.9 101 76.2
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 2.8e-32 142.9 99 76.8
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 2.8e-32 142.9 99 76.8
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 2.8e-32 142.9 99 76.8
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 2.8e-32 142.9 100 76.0
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 3.7e-32 142.5 148 59.5
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 3.7e-32 142.5 124 62.9
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 3.7e-32 142.5 96 72.9
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 3.7e-32 142.5 126 62.7
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 4.8e-32 142.1 98 76.5
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 4.8e-32 142.1 122 65.6
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 4.8e-32 142.1 98 75.5
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 4.8e-32 142.1 118 66.1
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 4.8e-32 142.1 99 74.7
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 8.2e-32 141.4 129 65.1
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.1e-31 141.0 100 70.0
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.4e-31 140.6 99 74.7
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.8e-31 140.2 99 76.8
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.8e-31 140.2 125 65.6
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.4e-31 139.8 99 74.7
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 2.4e-31 139.8 143 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 3.1e-31 139.4 111 63.1
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 3.1e-31 139.4 99 74.7
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 4.1e-31 139.0 94 75.5
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 5.3e-31 138.7 140 61.4
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 5.3e-31 138.7 98 75.5
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.3e-31 138.7 99 74.7
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 6.9e-31 138.3 98 70.4
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 9.0e-31 137.9 106 68.9
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 9.0e-31 137.9 106 68.9
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 9.0e-31 137.9 103 69.9
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.2e-30 137.5 99 74.7
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 1.5e-30 137.1 85 75.3
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 2.6e-30 136.3 86 81.4
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 2.6e-30 136.3 144 54.9
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.4e-30 136.0 126 60.3
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 4.5e-30 135.6 98 69.4
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 5.8e-30 135.2 81 87.7
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 6.1e-27 125.2 151 48.3
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.8e-26 123.6 81 77.8
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 3.0e-26 122.9 100 66.0
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.2e-24 116.7 126 54.8
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 2.0e-22 110.2 65 83.1
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.2e-21 106.7 57 93.0
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.5e-21 104.8 57 91.2
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 4.2e-20 102.4 98 57.1
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 3.6e-19 99.4 56 83.9
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 4.6e-19 99.0 120 50.8
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 6.1e-19 98.6 98 54.1
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 2.8e-16 89.7 101 52.5
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.4e-15 87.4 136 44.1
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 5.3e-15 85.5 46 87.0
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 3.8e-13 79.3 102 50.0
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.9e-12 77.0 58 65.5
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 2.1e-11 73.6 84 46.4
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 5.7e-09 65.5 121 29.8
PRCOL_00000182 Prasinoderma coloniale HOM05D066820 ORTHO05D004315 2.6e-06 56.6 80 30.0


User provided reference genes

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