Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 0.0e+00 1988.4 1015 100.0
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 0.0e+00 1615.9 1014 85.0
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 1.0e-236 824.3 927 49.5
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 9.5e-235 817.8 789 54.5
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 1.3e-223 780.8 863 49.6
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 6.4e-223 778.5 892 48.8
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 1.2e-221 774.2 890 50.2
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 1.2e-221 774.2 913 48.1
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 1.6e-221 773.9 903 49.2
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.9e-219 766.9 1079 44.0
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 1.9e-219 766.9 904 47.5
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 9.5e-219 764.6 903 49.1
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 3.1e-217 759.6 947 48.4
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 5.2e-217 758.8 903 47.1
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 2.0e-216 756.9 951 46.3
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 2.0e-216 756.9 906 47.8
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 5.8e-216 755.4 910 46.9
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 7.5e-216 755.0 743 53.4
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.7e-215 753.8 898 46.9
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 2.9e-215 753.1 946 46.0
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 2.4e-214 750.0 910 46.4
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 1.6e-213 747.3 904 47.9
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 2.1e-213 746.9 764 51.2
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 3.0e-212 743.0 901 47.7
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 1.5e-211 740.7 1094 41.7
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 4.3e-211 739.2 922 46.5
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 3.6e-210 736.1 896 47.1
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 8.1e-210 734.9 900 48.9
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 5.2e-209 732.3 906 46.1
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 2.0e-208 730.3 901 45.9
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 4.4e-208 729.2 820 49.1
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 2.2e-207 726.9 910 45.8
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 2.2e-207 726.9 812 49.3
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 3.7e-207 726.1 899 45.5
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 2.4e-206 723.4 1063 43.1
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 7.8e-205 718.4 898 46.2
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 5.1e-204 715.7 651 56.4
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 1.5e-203 714.1 946 44.7
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 1.9e-203 713.8 632 57.0
Zm00001eb419130 Zea mays HOM05D005064 ORTHO05D006611 1.2e-202 711.1 1068 41.7
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 4.7e-202 709.1 1087 43.3
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 1.8e-201 707.2 907 44.8
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 3.1e-201 706.4 1059 41.4
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 3.1e-201 706.4 937 43.5
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 3.1e-201 706.4 751 51.8
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 5.2e-201 705.7 803 48.3
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 6.8e-201 705.3 803 48.6
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 1.5e-200 704.1 910 46.0
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 4.4e-200 702.6 752 49.6
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 7.6e-200 701.8 877 46.9
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 1.3e-199 701.0 743 50.9
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 1.7e-199 700.7 1043 42.9
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.9e-199 699.9 906 43.8
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 1.1e-198 698.0 738 50.3
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 2.1e-197 693.7 906 43.3
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 2.1e-197 693.7 856 45.7
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 2.7e-197 693.3 881 44.9
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 3.5e-197 693.0 864 45.8
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 3.0e-196 689.9 899 44.0
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 6.6e-196 688.7 756 50.4
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 8.7e-196 688.3 839 46.2
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 8.7e-196 688.3 750 49.3
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 7.3e-195 685.3 940 43.1
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 9.6e-195 684.9 909 43.1
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 1.1e-193 681.4 768 48.3
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 4.0e-193 679.5 895 44.0
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 5.3e-193 679.1 905 44.4
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 1.2e-192 677.9 741 48.0
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.6e-192 676.8 744 48.1
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 3.8e-191 672.9 785 48.3
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.9e-190 670.6 752 50.0
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 2.4e-190 670.2 891 43.5
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 1.3e-188 664.5 865 44.4
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.1e-187 661.4 738 47.7
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 2.1e-186 657.1 1037 39.4
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 2.8e-186 656.8 740 48.1
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 1.4e-185 654.4 738 47.6
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 1.4e-185 654.4 673 49.9
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 1.8e-185 654.1 899 42.8
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 3.1e-185 653.3 760 47.2
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 1.2e-184 651.4 898 41.5
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 3.8e-183 646.4 822 44.6
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 1.1e-182 644.8 1053 39.8
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 2.4e-182 643.7 826 43.7
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 2.1e-181 640.6 761 46.9
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 2.7e-181 640.2 883 41.7
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 1.0e-180 638.3 740 47.8
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 3.0e-180 636.7 740 47.3
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 2.0e-176 624.0 897 41.6
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 5.8e-176 622.5 856 43.2
C06p17140 Brassica napus HOM05D005064 ORTHO05D006611 1.3e-175 621.3 894 41.8
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 4.9e-175 619.4 766 46.7
BolC6t36909H Brassica oleracea HOM05D005064 ORTHO05D006611 1.0e-172 611.7 878 41.9
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 8.7e-172 608.6 908 40.2
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 1.1e-171 608.2 865 41.8
CDE04G0109 Ceratophyllum demersum HOM05D005064 ORTHO05D006611 1.5e-171 607.8 823 43.7
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.1e-169 601.7 737 46.0
SEGI_30642 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 1.1e-169 601.7 752 45.7
Ah.12g059020 Amaranthus hybridus HOM05D005064 ORTHO05D006611 6.5e-167 592.4 842 42.8
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 6.5e-167 592.4 1048 38.4
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 6.5e-167 592.4 1048 38.4
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 2.2e-162 577.4 870 42.4
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 1.6e-144 518.1 824 39.1
Medtr0191s0030 Medicago truncatula HOM05D005064 ORTHO05D006611 1.6e-144 518.1 584 48.6
Medtr6g033115 Medicago truncatula HOM05D005064 ORTHO05D006611 1.6e-144 518.1 625 46.7
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 9.8e-131 472.2 793 38.7
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 4.2e-126 456.8 514 48.8
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 2.9e-119 434.1 727 39.8
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 4.0e-116 423.7 456 50.7
AagrBONN_evm.TU.Sc2ySwM_362.1800 Anthoceros agrestis HOM05D005064 ORTHO05D006611 2.7e-112 411.0 838 34.4
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 2.7e-112 411.0 568 43.7
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 1.1e-110 405.6 710 39.6
Mapoly0045s0096 Marchantia polymorpha HOM05D005064 ORTHO05D006611 1.3e-106 392.1 720 36.0
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 5.2e-100 370.2 464 45.7
SEGI_27109 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 3.5e-96 357.5 400 48.5
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 6.4e-82 310.1 338 51.5
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 4.6e-80 303.9 1079 27.9
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 1.3e-79 302.4 305 50.8
Phvul.L001612 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 3.2e-73 281.2 304 48.0
TPR.G18982 Trifolium pratense HOM05D005064 ORTHO05D006611 4.5e-67 260.8 262 49.2
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 6.4e-66 256.9 283 49.5
CBR_g19766 Chara braunii HOM05D005064 ORTHO05D000048 7.1e-65 253.4 407 35.9
SEGI_19397 Sequoiadendron giganteum HOM05D005064 ORTHO05D006611 1.6e-61 242.3 357 42.0
Nitab4.5_0021252g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 4.0e-60 237.7 621 32.9
Haze_21131 Corylus avellana HOM05D005064 ORTHO05D006611 5.0e-50 204.1 322 43.2
Haze_21134 Corylus avellana HOM05D005064 ORTHO05D006611 5.0e-50 204.1 322 43.2
MCO02G178 Micromonas commoda HOM05D005064 ORTHO05D006611 5.9e-35 154.1 645 26.4
CBR_g19769 Chara braunii HOM05D005064 ORTHO05D006611 6.3e-29 134.0 288 31.6
Cre13.g566900 Chlamydomonas reinhardtii HOM05D005064 ORTHO05D006611 1.0e-23 116.7 249 30.9
CAN.G989.5 Capsicum annuum HOM05D005064 ORTHO05D000001 3.3e-22 111.7 275 33.5
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 1.8e-07 62.8 52 61.5


User provided reference genes

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