Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013103 Vanilla planifolia HOM05D000461 ORTHO05D428983 1.3e-60 236.5 147 100.0
PSO210G5867 Papaver somniferum HOM05D000461 ORTHO05D001829 2.8e-18 95.9 111 53.2
PSO447G0032 Papaver somniferum HOM05D000461 ORTHO05D001829 2.8e-18 95.9 111 53.2
TAR381G0118 Trochodendron aralioides HOM05D000461 ORTHO05D001829 6.8e-17 91.3 111 51.4
CDE10G1297 Ceratophyllum demersum HOM05D000461 ORTHO05D001829 1.2e-16 90.5 111 50.5
MBI05_g02442_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D001829 4.4e-16 88.6 110 49.1
MBI05_g39688_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D001829 4.4e-16 88.6 110 49.1
Aqoxy6G00759 Aquilegia oxysepala HOM05D000461 ORTHO05D001829 2.2e-15 86.3 110 50.0
TAR628G0876 Trochodendron aralioides HOM05D000461 ORTHO05D001829 2.4e-14 82.8 110 48.2
Hma1.2p1_0522F.1_g171740 Hydrangea macrophylla HOM05D000461 ORTHO05D001829 1.0e-12 77.4 110 48.2
Dinv24180 Davidia involucrata HOM05D000461 ORTHO05D001829 6.6e-12 74.7 149 40.9
Actinidia28050 Actinidia chinensis HOM05D000461 ORTHO05D001829 4.3e-11 72.0 107 46.7
Lj9A352T76 Lonicera japonica HOM05D000461 ORTHO05D001829 1.6e-10 70.1 104 45.2
Dinv09021 Davidia involucrata HOM05D000461 ORTHO05D001829 2.8e-10 69.3 111 45.0
GSVIVG01015722001 Vitis vinifera HOM05D000461 ORTHO05D001829 3.1e-09 65.9 104 41.3
ECA240G2472 Erigeron canadensis HOM05D000461 ORTHO05D001829 6.8e-09 64.7 106 43.4
Cc11_g10370 Coffea canephora HOM05D000461 ORTHO05D001829 8.9e-09 64.3 111 44.1
Migut.N01075 Erythranthe guttata HOM05D000461 ORTHO05D001829 8.9e-09 64.3 109 42.2
CSS0049018 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D001829 1.2e-08 63.9 108 43.5
DCAR_029206 Daucus carota HOM05D000461 ORTHO05D001829 3.4e-08 62.4 108 42.6
Zm00001eb255360 Zea mays HOM05D000461 ORTHO05D001829 3.4e-08 62.4 106 44.3
Solyc10g047350.2 Solanum lycopersicum HOM05D000461 ORTHO05D001829 9.8e-08 60.8 97 44.3
Sopen10g017630 Solanum pennellii HOM05D000461 ORTHO05D001829 9.8e-08 60.8 97 44.3
MSTRG.5269 Avicennia marina HOM05D000461 ORTHO05D001829 1.3e-07 60.5 108 41.7
Cfa014043 Carpinus fangiana HOM05D000461 ORTHO05D001829 1.7e-07 60.1 48 60.4
Haze_22744 Corylus avellana HOM05D000461 ORTHO05D001829 1.7e-07 60.1 48 60.4
Eucgr.F03541 Eucalyptus grandis HOM05D000461 ORTHO05D001829 1.7e-07 60.1 39 71.8
SEGI_03029 Sequoiadendron giganteum HOM05D000461 ORTHO05D001829 1.7e-07 60.1 101 39.6
SEGI_06265 Sequoiadendron giganteum HOM05D000461 ORTHO05D001829 1.7e-07 60.1 101 39.6
ATR0782G034 Amborella trichopoda HOM05D000461 ORTHO05D001829 2.2e-07 59.7 94 39.4
Nitab4.5_0000294g0040 Nicotiana tabacum HOM05D000461 ORTHO05D001829 3.7e-07 58.9 52 59.6
Nitab4.5_0002067g0030 Nicotiana tabacum HOM05D000461 ORTHO05D001829 4.9e-07 58.5 42 66.7
Oeu019358.1 Olea europaea HOM05D000461 ORTHO05D001829 4.9e-07 58.5 94 39.4
Os02g0755200 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D001829 4.9e-07 58.5 106 40.6
Potri.002G013100 Populus trichocarpa HOM05D000461 ORTHO05D001829 4.9e-07 58.5 40 67.5
Oeu006762.1 Olea europaea HOM05D000461 ORTHO05D001829 6.4e-07 58.2 78 44.9
Phvul.004G159100 Phaseolus vulgaris HOM05D000461 ORTHO05D001829 6.4e-07 58.2 47 61.7
QL02p013759 Quercus lobata HOM05D000461 ORTHO05D001829 6.4e-07 58.2 48 56.2
VMungo0464G0588 Vigna mungo HOM05D000461 ORTHO05D001829 6.4e-07 58.2 47 61.7
ClCG11G018400 Citrullus lanatus HOM05D000461 ORTHO05D001829 8.3e-07 57.8 94 37.2
Peaxi162Scf01111g00023 Petunia axillaris HOM05D000461 ORTHO05D001829 8.3e-07 57.8 85 41.2
SEGI_38905 Sequoiadendron giganteum HOM05D000461 ORTHO05D001829 8.3e-07 57.8 78 42.3
unitig_699.g19867 Utricularia gibba HOM05D000461 ORTHO05D001829 8.3e-07 57.8 40 65.0
CiPaw.07G140800 Carya illinoinensis HOM05D000461 ORTHO05D001829 1.1e-06 57.4 61 52.5
Gohir.A05G180500 Gossypium hirsutum HOM05D000461 ORTHO05D001829 1.1e-06 57.4 59 57.6
Gohir.D05G183500 Gossypium hirsutum HOM05D000461 ORTHO05D001829 1.1e-06 57.4 59 57.6
Gorai.009G188800 Gossypium raimondii HOM05D000461 ORTHO05D001829 1.1e-06 57.4 59 57.6
Peaxi162Scf00003g03510 Petunia axillaris HOM05D000461 ORTHO05D001829 1.1e-06 57.4 108 41.7
PGSC0003DMG400044864 Solanum tuberosum HOM05D000461 ORTHO05D001829 1.1e-06 57.4 97 44.3
TAR627G0339 Trochodendron aralioides HOM05D000461 ORTHO05D001829 1.1e-06 57.4 88 38.6
arahy.Tifrunner.gnm1.ann1.I6MCCY Arachis hypogaea HOM05D000461 ORTHO05D001829 1.4e-06 57.0 58 53.4
arahy.Tifrunner.gnm1.ann1.Y4AQW3 Arachis hypogaea HOM05D000461 ORTHO05D001829 1.4e-06 57.0 58 53.4
MSTRG.14956 Avicennia marina HOM05D000461 ORTHO05D001829 1.4e-06 57.0 88 38.6
DCAR_009981 Daucus carota HOM05D000461 ORTHO05D001829 1.4e-06 57.0 88 42.0
Actinidia35272 Actinidia chinensis HOM05D000461 ORTHO05D001829 1.9e-06 56.6 75 38.7
HanXRQChr11g0330931 Helianthus annuus HOM05D000461 ORTHO05D001829 1.9e-06 56.6 94 41.5
Hma1.2p1_1791F.1_g302540 Hydrangea macrophylla HOM05D000461 ORTHO05D001829 2.4e-06 56.2 94 39.4
Lsat_1_v5_gn_9_116880 Lactuca sativa HOM05D000461 ORTHO05D001829 2.4e-06 56.2 111 36.9
Phvul.011G154200 Phaseolus vulgaris HOM05D000461 ORTHO05D001829 2.4e-06 56.2 88 37.5
SGA_v2.0_scaffold45G17318 Striga asiatica HOM05D000461 ORTHO05D001829 2.4e-06 56.2 108 38.9
Thecc.08G057000 Theobroma cacao HOM05D000461 ORTHO05D001829 2.4e-06 56.2 59 55.9
Ciclev10000325m.g Citrus clementina HOM05D000461 ORTHO05D001829 3.2e-06 55.8 55 58.2
FAN15G0906 Fragaria x ananassa HOM05D000461 ORTHO05D001829 3.2e-06 55.8 61 50.8
Glyma.07G090100 Glycine max HOM05D000461 ORTHO05D001829 3.2e-06 55.8 47 57.4
Glyma.09G185800 Glycine max HOM05D000461 ORTHO05D001829 3.2e-06 55.8 46 58.7
PSO675G6832 Papaver somniferum HOM05D000461 ORTHO05D001829 3.2e-06 55.8 85 37.6
Atru.chr13.169 Acer truncatum HOM05D000461 ORTHO05D001829 4.1e-06 55.5 42 61.9
arahy.Tifrunner.gnm1.ann1.0C8612 Arachis hypogaea HOM05D000461 ORTHO05D001829 4.1e-06 55.5 98 35.7
arahy.Tifrunner.gnm1.ann1.S62F0N Arachis hypogaea HOM05D000461 ORTHO05D001829 4.1e-06 55.5 98 35.7
CARHR088420 Cardamine hirsuta HOM05D000461 ORTHO05D001829 4.1e-06 55.5 85 40.0
Glyma.06G250100 Glycine max HOM05D000461 ORTHO05D001829 4.1e-06 55.5 78 38.5
HanXRQChr03g0067561 Helianthus annuus HOM05D000461 ORTHO05D001829 4.1e-06 55.5 52 59.6
Nn1g06721 Nelumbo nucifera HOM05D000461 ORTHO05D001829 4.1e-06 55.5 78 38.5
PGR031G0825 Punica granatum HOM05D000461 ORTHO05D001829 4.1e-06 55.5 39 64.1
TWI12G0961 Tripterygium wilfordii HOM05D000461 ORTHO05D001829 4.1e-06 55.5 61 52.5
TAR629G1505 Trochodendron aralioides HOM05D000461 ORTHO05D001829 4.1e-06 55.5 88 37.5
CANSAT25G2594 Cannabis sativa HOM05D000461 ORTHO05D001829 5.4e-06 55.1 48 56.2
CAN.G1.62 Capsicum annuum HOM05D000461 ORTHO05D001829 5.4e-06 55.1 113 38.9
Cpa.g.sc26.224 Carica papaya HOM05D000461 ORTHO05D001829 5.4e-06 55.1 59 54.2
FvH4_2g37680 Fragaria vesca HOM05D000461 ORTHO05D001829 5.4e-06 55.1 61 50.8
FAN20G1850 Fragaria x ananassa HOM05D000461 ORTHO05D001829 5.4e-06 55.1 61 50.8
FAN27G1141 Fragaria x ananassa HOM05D000461 ORTHO05D001829 5.4e-06 55.1 61 50.8
Lalb_Chr14g0371261 Lupinus albus HOM05D000461 ORTHO05D001829 5.4e-06 55.1 51 54.9
THA.LOC104813169 Tarenaya hassleriana HOM05D000461 ORTHO05D001829 5.4e-06 55.1 47 57.4
MELO3C018203.2 Cucumis melo HOM05D000461 ORTHO05D001829 7.0e-06 54.7 88 34.1
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 7.0e-06 54.7 78 39.7
ECA236G1193 Erigeron canadensis HOM05D000461 ORTHO05D001829 7.0e-06 54.7 94 38.3
SGA_v2.0_scaffold73G24310 Striga asiatica HOM05D000461 ORTHO05D001829 7.0e-06 54.7 78 41.0
AT3G13682 Arabidopsis thaliana HOM05D000461 ORTHO05D001829 9.2e-06 54.3 85 41.2
BcaB07g31362 Brassica carinata HOM05D000461 ORTHO05D001829 9.2e-06 54.3 42 59.5
Carub.0002s0215 Capsella rubella HOM05D000461 ORTHO05D001829 9.2e-06 54.3 52 53.8
Duzib093G2245 Durio zibethinus HOM05D000461 ORTHO05D001829 9.2e-06 54.3 59 54.2
PSO541G4046 Papaver somniferum HOM05D000461 ORTHO05D001829 9.2e-06 54.3 85 37.6
Prupe.1G356300 Prunus persica HOM05D000461 ORTHO05D001829 9.2e-06 54.3 61 49.2
Sp3g11880 Schrenkiella parvula HOM05D000461 ORTHO05D001829 9.2e-06 54.3 94 37.2


User provided reference genes

Program Settings