Gene: Potri.002G013100

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.002G013100
  • Transcript Identifier Potri.002G013100.1
  • Gene Type Coding gene
  • Location Chr02 : 805498-807885 : positive

Gene Family Information

  • ID HOM05D000461
  • #Genes/#Species 1145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.002G013100.v4.1
  • pacid 42777478
  • synonym eugene3.00020116

Descriptions

  • Description PTHR10742:SF246 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G62830
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62830
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT1G62830
GO:0051568
ISO
PLAZA Integrative Orthologyhistone H3-K4 methylation AT1G62830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G62830
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G62830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR002937 Amine oxidase
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR007526 SWIRM domain
Mapman id Description
12.3.3.7.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1)