Gene: SGA_v2.0_scaffold45G17318

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold45G17318
  • Transcript Identifier SGA_v2.0_scaffold45T17318
  • Gene Type Coding gene
  • Location scaffold45 : 2274372-2276771 : negative

Gene Family Information

  • ID HOM05D000461
  • #Genes/#Species 1145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Lysine-specific histone demethylase 1 homolog 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G62830
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62830
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT1G62830
GO:0051568
ISO
PLAZA Integrative Orthologyhistone H3-K4 methylation AT1G62830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G62830
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G62830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR007526 SWIRM domain
IPR009057 Homeobox-like domain superfamily
IPR002937 Amine oxidase
Mapman id Description
12.3.3.7.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1)