Gene: FAN27G1141

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN27G1141
  • Transcript Identifier FAN27G1141.1
  • Gene Type Coding gene
  • Location Fvb2-1 : 24529665-24532064 : positive

Gene Family Information

  • ID HOM05D000461
  • #Genes/#Species 1145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb2-1-processed-gene-245.6.v1.0.a1
  • pacid 50514553

Descriptions

  • Description K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G62830
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62830
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT1G62830
GO:0051568
ISO
PLAZA Integrative Orthologyhistone H3-K4 methylation AT1G62830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G62830
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G62830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR007526 SWIRM domain
IPR009057 Homeobox-like domain superfamily
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR002937 Amine oxidase
Mapman id Description
12.3.3.7.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1)