Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012174 Vanilla planifolia HOM05D017293 ORTHO05D019386 1.9e-168 595.9 321 100.0
HPP92_012170 Vanilla planifolia HOM05D017293 ORTHO05D019386 7.7e-106 387.9 369 63.1
HPP92_012175 Vanilla planifolia HOM05D017293 ORTHO05D019386 2.9e-97 359.4 276 72.5
HPP92_012171 Vanilla planifolia HOM05D017293 ORTHO05D019386 4.5e-82 308.9 310 60.6
HPP92_012173 Vanilla planifolia HOM05D017293 ORTHO05D019386 2.0e-50 203.8 295 48.1
HPP92_012176 Vanilla planifolia HOM05D017293 ORTHO05D019386 3.0e-41 173.3 223 55.2
HPP92_012168 Vanilla planifolia HOM05D017293 ORTHO05D019386 5.4e-35 152.5 172 63.4
HPP92_026952 Vanilla planifolia HOM05D003358 ORTHO05D003864 5.4e-19 99.4 142 54.2
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 1.7e-17 94.4 66 80.3
HPP92_012169 Vanilla planifolia HOM05D003404 ORTHO05D004052 3.1e-14 83.6 40 97.5
CDE05G1207 Ceratophyllum demersum HOM05D003404 ORTHO05D004052 9.0e-14 82.0 108 44.4
Zm00001eb207390 Zea mays HOM05D003404 ORTHO05D004052 1.5e-13 81.3 64 67.2
arahy.Tifrunner.gnm1.ann1.F0HWYS Arachis hypogaea HOM05D003404 ORTHO05D004052 2.0e-13 80.9 72 63.9
arahy.Tifrunner.gnm1.ann1.TT7XH0 Arachis hypogaea HOM05D003404 ORTHO05D004052 2.0e-13 80.9 72 63.9
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 2.0e-13 80.9 65 67.7
MBI06_g16624_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 2.0e-13 80.9 71 60.6
Os02g0167700 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 2.0e-13 80.9 64 67.2
Sed0011322 Sechium edule HOM05D003404 ORTHO05D004052 2.0e-13 80.9 84 57.1
Ciclev10000063m.g Citrus clementina HOM05D003404 ORTHO05D004052 3.4e-13 80.1 72 63.9
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 3.4e-13 80.1 77 59.7
Nn5g27178 Nelumbo nucifera HOM05D003404 ORTHO05D004052 3.4e-13 80.1 82 56.1
QL02p103380 Quercus lobata HOM05D003404 ORTHO05D004052 3.4e-13 80.1 84 57.1
Glyma.07G272400 Glycine max HOM05D003404 ORTHO05D004052 4.5e-13 79.7 62 67.7
Phvul.003G076300 Phaseolus vulgaris HOM05D003404 ORTHO05D004052 4.5e-13 79.7 62 67.7
TWI14G1077 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 4.5e-13 79.7 65 67.7
HPP92_000046 Vanilla planifolia HOM05D017293 ORTHO05D019386 4.5e-13 79.7 119 42.9
VMungo1215G2990 Vigna mungo HOM05D003404 ORTHO05D004052 4.5e-13 79.7 62 67.7
ClCG10G007400 Citrullus lanatus HOM05D003404 ORTHO05D004052 5.8e-13 79.3 84 54.8
MELO3C016463.2 Cucumis melo HOM05D003404 ORTHO05D004052 5.8e-13 79.3 84 54.8
Glyma.17G002000 Glycine max HOM05D003404 ORTHO05D004052 5.8e-13 79.3 62 66.1
TWI59G0557 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 5.8e-13 79.3 118 43.2
Lalb_Chr15g0090861 Lupinus albus HOM05D003404 ORTHO05D004052 7.6e-13 79.0 62 69.4
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 9.9e-13 78.6 65 66.2
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 61.1
Dinv29680 Davidia involucrata HOM05D003404 ORTHO05D004052 9.9e-13 78.6 84 54.8
Lalb_Chr18g0061171 Lupinus albus HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 62.5
Medtr4g134620 Medicago truncatula HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 62.5
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 61.1
Nitab4.5_0007689g0020 Nicotiana tabacum HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 61.1
Psat4g002640 Pisum sativum HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 62.5
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 61.1
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 61.1
TPR.G6014 Trifolium pratense HOM05D003404 ORTHO05D004052 9.9e-13 78.6 72 62.5
Lj4g0008829 Lotus japonicus HOM05D003404 ORTHO05D004052 1.3e-12 78.2 62 66.1
GSVIVG01023143001 Vitis vinifera HOM05D003404 ORTHO05D004052 1.3e-12 78.2 72 61.1
Cfa004441 Carpinus fangiana HOM05D003404 ORTHO05D004052 1.7e-12 77.8 65 64.6
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 1.7e-12 77.8 72 58.3
Oeu028474.1 Olea europaea HOM05D003404 ORTHO05D004052 1.7e-12 77.8 72 61.1
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 1.7e-12 77.8 72 59.7
Ah.03g136760 Amaranthus hybridus HOM05D003404 ORTHO05D004052 2.2e-12 77.4 65 66.2
PSO210G7577 Papaver somniferum HOM05D003404 ORTHO05D004052 2.2e-12 77.4 108 45.4
PSO761G0035 Papaver somniferum HOM05D003404 ORTHO05D004052 2.2e-12 77.4 108 45.4
ATR1089G109 Amborella trichopoda HOM05D003404 ORTHO05D004052 2.9e-12 77.0 67 59.7
Haze_09982 Corylus avellana HOM05D003404 ORTHO05D004052 2.9e-12 77.0 65 63.1
Duzib235G1119 Durio zibethinus HOM05D003404 ORTHO05D004052 2.9e-12 77.0 65 64.6
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 2.9e-12 77.0 72 59.7
Gohir.A06G144600 Gossypium hirsutum HOM05D003404 ORTHO05D004052 3.8e-12 76.6 72 61.1
Gohir.D06G150300 Gossypium hirsutum HOM05D003404 ORTHO05D004052 3.8e-12 76.6 72 61.1
Gorai.010G175500 Gossypium raimondii HOM05D003404 ORTHO05D004052 3.8e-12 76.6 72 61.1
Potri.004G229300 Populus trichocarpa HOM05D003404 ORTHO05D004052 3.8e-12 76.6 70 61.4
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 3.8e-12 76.6 70 61.4
Actinidia26195 Actinidia chinensis HOM05D003404 ORTHO05D004052 4.9e-12 76.3 84 53.6
CiPaw.05G001400 Carya illinoinensis HOM05D003404 ORTHO05D004052 4.9e-12 76.3 65 63.1
Dinv29635 Davidia involucrata HOM05D003404 ORTHO05D004052 4.9e-12 76.3 72 59.7
PGR042G3714 Punica granatum HOM05D003404 ORTHO05D004052 4.9e-12 76.3 55 65.5
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 6.4e-12 75.9 55 67.3
arahy.Tifrunner.gnm1.ann1.4Z0G7J Arachis hypogaea HOM05D003404 ORTHO05D004052 8.4e-12 75.5 72 59.7
Manes.07G030800 Manihot esculenta HOM05D003404 ORTHO05D004052 8.4e-12 75.5 70 61.4
vmacro19829 Vaccinium macrocarpon HOM05D003404 ORTHO05D004052 8.4e-12 75.5 77 54.5
arahy.Tifrunner.gnm1.ann1.M7XV95 Arachis hypogaea HOM05D003404 ORTHO05D004052 1.1e-11 75.1 53 71.7
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 1.1e-11 75.1 55 67.3
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 1.1e-11 75.1 72 58.3
Sc12g0008780 Simmondsia chinensis HOM05D003404 ORTHO05D004052 1.1e-11 75.1 65 66.2
COL.COLO4_31122 Corchorus olitorius HOM05D003404 ORTHO05D004052 1.4e-11 74.7 72 61.1
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 1.4e-11 74.7 72 61.1
Thecc.06G019500 Theobroma cacao HOM05D003404 ORTHO05D004052 1.4e-11 74.7 72 59.7
TAR376G0925 Trochodendron aralioides HOM05D003404 ORTHO05D004052 1.4e-11 74.7 67 59.7
arahy.Tifrunner.gnm1.ann1.V95A4R Arachis hypogaea HOM05D003404 ORTHO05D004052 1.9e-11 74.3 77 57.1
unitig_27.g24934 Utricularia gibba HOM05D003404 ORTHO05D004052 1.9e-11 74.3 55 69.1
C07p33270 Brassica napus HOM05D003404 ORTHO05D004052 2.4e-11 73.9 72 56.9
BolC7t43839H Brassica oleracea HOM05D003404 ORTHO05D004052 2.4e-11 73.9 72 56.9
Mapoly0029s0003 Marchantia polymorpha HOM05D003404 ORTHO05D004052 2.4e-11 73.9 56 64.3
Potri.003G000500 Populus trichocarpa HOM05D003404 ORTHO05D004052 2.4e-11 73.9 70 60.0
Aqoxy5G01845 Aquilegia oxysepala HOM05D003404 ORTHO05D004052 3.2e-11 73.6 67 61.2
arahy.Tifrunner.gnm1.ann1.GKM8IL Arachis hypogaea HOM05D003404 ORTHO05D004052 3.2e-11 73.6 72 58.3
CANSAT21G0984 Cannabis sativa HOM05D003404 ORTHO05D004052 3.2e-11 73.6 65 63.1
CsaV3_3G006660 Cucumis sativus L. HOM05D003404 ORTHO05D004052 3.2e-11 73.6 142 38.0
Duzib192G0569 Durio zibethinus HOM05D003404 ORTHO05D004052 3.2e-11 73.6 72 58.3
MD01G1232300 Malus domestica HOM05D003404 ORTHO05D004052 3.2e-11 73.6 72 63.9
MD07G1304100 Malus domestica HOM05D003404 ORTHO05D004052 3.2e-11 73.6 72 63.9
AT2G02560 Arabidopsis thaliana HOM05D003404 ORTHO05D004052 4.2e-11 73.2 72 56.9
Rhsim05G0115300 Rhododendron simsii HOM05D003404 ORTHO05D004052 4.2e-11 73.2 55 67.3
SMO364G0878 Selaginella moellendorffii HOM05D003404 ORTHO05D004052 4.2e-11 73.2 56 66.1
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 4.2e-11 73.2 65 63.1
BcaC06g31225 Brassica carinata HOM05D003404 ORTHO05D004052 5.4e-11 72.8 72 56.9
Prupe.2G322700 Prunus persica HOM05D003404 ORTHO05D004052 5.4e-11 72.8 72 62.5
Sp2g13790 Schrenkiella parvula HOM05D003404 ORTHO05D004052 5.4e-11 72.8 72 56.9
AL5G11830 Arabidopsis lyrata HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 56.9
BcaB07g30328 Brassica carinata HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
BcaC03g17156 Brassica carinata HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
A02p33040 Brassica napus HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
A06p43570 Brassica napus HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
C02p50810 Brassica napus HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
BolC2t11162H Brassica oleracea HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
BraA02t08325Z Brassica rapa HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
BraA06t27242Z Brassica rapa HOM05D003404 ORTHO05D004052 7.1e-11 72.4 51 70.6
Carub.0005s0156 Capsella rubella HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 56.9
CARHR145090 Cardamine hirsuta HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 56.9
DCAR_001727 Daucus carota HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 58.3
Thhalv10003535m.g Eutrema salsugineum HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 56.9
RcHm_v2.0_Chr1g0383371 Rosa chinensis HOM05D003404 ORTHO05D004052 7.1e-11 72.4 72 62.5
Atru.chr6.225 Acer truncatum HOM05D003404 ORTHO05D004052 9.3e-11 72.0 72 56.9
Sabra03G0000100 Salix brachista HOM05D003404 ORTHO05D004052 9.3e-11 72.0 70 60.0
ECA236G3319 Erigeron canadensis HOM05D003404 ORTHO05D004052 1.2e-10 71.6 55 63.6
HanXRQChr04g0110261 Helianthus annuus HOM05D003404 ORTHO05D004052 1.6e-10 71.2 72 59.7
Eucgr.G00074 Eucalyptus grandis HOM05D003404 ORTHO05D004052 2.1e-10 70.9 55 63.6
Pp3c4_6460 Physcomitrium patens HOM05D003404 ORTHO05D004052 2.1e-10 70.9 56 58.9
Aa31LG2G7580 Aethionema arabicum HOM05D003404 ORTHO05D004052 3.5e-10 70.1 51 68.6
Pp3c8_3260 Physcomitrium patens HOM05D003404 ORTHO05D004052 3.5e-10 70.1 56 57.1
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 6.0e-10 69.3 72 61.1
THA.LOC104805135 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 1.3e-09 68.2 72 51.4
THA.LOC104801780 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 1.8e-09 67.8 72 51.4
FvH4_7g33400 Fragaria vesca HOM05D003404 ORTHO05D004052 3.9e-09 66.6 72 59.7
FAN01G2685 Fragaria x ananassa HOM05D003404 ORTHO05D004052 3.9e-09 66.6 72 59.7
FAN03G0122 Fragaria x ananassa HOM05D003404 ORTHO05D004052 3.9e-09 66.6 72 59.7
arahy.Tifrunner.gnm1.ann1.HGQ6MN Arachis hypogaea HOM05D003404 ORTHO05D004052 6.7e-09 65.9 48 72.9
AagrBONN_evm.TU.Sc2ySwM_228.3869 Anthoceros agrestis HOM05D003404 ORTHO05D004052 1.1e-08 65.1 66 54.5
arahy.Tifrunner.gnm1.ann1.R2063T Arachis hypogaea HOM05D003404 ORTHO05D004052 1.9e-08 64.3 48 72.9
SHI05020 Sapria himalayana HOM05D003404 ORTHO05D004052 4.3e-08 63.2 55 60.0
CBR_g18772 Chara braunii HOM05D003404 ORTHO05D004052 1.8e-06 57.8 56 55.4


User provided reference genes

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