Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012169 Vanilla planifolia HOM05D003404 ORTHO05D004052 6.0e-83 310.8 161 100.0
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 1.2e-35 153.7 129 69.0
Aqoxy5G01845 Aquilegia oxysepala HOM05D003404 ORTHO05D004052 1.4e-28 130.2 132 58.3
MBI06_g16624_MAGBIO Magnolia biondii HOM05D003404 ORTHO05D004052 3.2e-28 129.0 132 56.1
ATR1089G109 Amborella trichopoda HOM05D003404 ORTHO05D004052 1.2e-27 127.1 132 56.8
PSO210G7577 Papaver somniferum HOM05D003404 ORTHO05D004052 1.6e-27 126.7 132 56.8
QL02p103380 Quercus lobata HOM05D003404 ORTHO05D004052 1.6e-27 126.7 132 56.8
Ciclev10000063m.g Citrus clementina HOM05D003404 ORTHO05D004052 3.6e-27 125.6 132 56.1
Atru.chr6.225 Acer truncatum HOM05D003404 ORTHO05D004052 4.6e-27 125.2 132 54.5
Cfa004441 Carpinus fangiana HOM05D003404 ORTHO05D004052 6.1e-27 124.8 132 54.5
Haze_09982 Corylus avellana HOM05D003404 ORTHO05D004052 6.1e-27 124.8 132 54.5
CiPaw.05G001400 Carya illinoinensis HOM05D003404 ORTHO05D004052 7.9e-27 124.4 132 55.3
Os02g0167700 Oryza sativa ssp. japonica HOM05D003404 ORTHO05D004052 1.0e-26 124.0 132 55.3
Nn5g27178 Nelumbo nucifera HOM05D003404 ORTHO05D004052 1.3e-26 123.6 132 55.3
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 1.3e-26 123.6 132 54.5
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 1.8e-26 123.2 132 54.5
PSO761G0035 Papaver somniferum HOM05D003404 ORTHO05D004052 2.3e-26 122.9 118 60.2
Dinv29680 Davidia involucrata HOM05D003404 ORTHO05D004052 3.0e-26 122.5 132 53.8
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 3.9e-26 122.1 132 54.5
Actinidia26195 Actinidia chinensis HOM05D003404 ORTHO05D004052 5.1e-26 121.7 132 53.0
Dinv29635 Davidia involucrata HOM05D003404 ORTHO05D004052 5.1e-26 121.7 132 52.3
arahy.Tifrunner.gnm1.ann1.F0HWYS Arachis hypogaea HOM05D003404 ORTHO05D004052 6.7e-26 121.3 132 54.5
arahy.Tifrunner.gnm1.ann1.TT7XH0 Arachis hypogaea HOM05D003404 ORTHO05D004052 6.7e-26 121.3 132 54.5
vmacro19829 Vaccinium macrocarpon HOM05D003404 ORTHO05D004052 8.8e-26 120.9 132 53.0
MD07G1304100 Malus domestica HOM05D003404 ORTHO05D004052 1.1e-25 120.6 128 57.0
Nitab4.5_0007689g0020 Nicotiana tabacum HOM05D003404 ORTHO05D004052 1.1e-25 120.6 129 52.7
RcHm_v2.0_Chr1g0383371 Rosa chinensis HOM05D003404 ORTHO05D004052 1.1e-25 120.6 128 57.0
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 1.5e-25 120.2 132 53.0
Potri.003G000500 Populus trichocarpa HOM05D003404 ORTHO05D004052 1.9e-25 119.8 132 53.8
Sed0011322 Sechium edule HOM05D003404 ORTHO05D004052 1.9e-25 119.8 132 53.8
Duzib235G1119 Durio zibethinus HOM05D003404 ORTHO05D004052 2.5e-25 119.4 132 53.8
Manes.07G030800 Manihot esculenta HOM05D003404 ORTHO05D004052 2.5e-25 119.4 132 53.8
TAR376G0925 Trochodendron aralioides HOM05D003404 ORTHO05D004052 2.5e-25 119.4 132 53.0
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 3.3e-25 119.0 132 52.3
COL.COLO4_31122 Corchorus olitorius HOM05D003404 ORTHO05D004052 3.3e-25 119.0 132 53.8
Oeu028474.1 Olea europaea HOM05D003404 ORTHO05D004052 3.3e-25 119.0 132 53.8
Prupe.2G322700 Prunus persica HOM05D003404 ORTHO05D004052 3.3e-25 119.0 128 56.2
Rhsim05G0115300 Rhododendron simsii HOM05D003404 ORTHO05D004052 3.3e-25 119.0 132 53.0
GSVIVG01023143001 Vitis vinifera HOM05D003404 ORTHO05D004052 3.3e-25 119.0 132 53.8
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 52.3
CDE05G1207 Ceratophyllum demersum HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 51.5
Glyma.07G272400 Glycine max HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 52.3
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 52.3
Potri.004G229300 Populus trichocarpa HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 53.0
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 52.3
Thecc.06G019500 Theobroma cacao HOM05D003404 ORTHO05D004052 4.3e-25 118.6 132 53.0
Duzib192G0569 Durio zibethinus HOM05D003404 ORTHO05D004052 5.7e-25 118.2 119 56.3
MD01G1232300 Malus domestica HOM05D003404 ORTHO05D004052 5.7e-25 118.2 128 56.2
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 53.0
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 53.8
Glyma.17G002000 Glycine max HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 52.3
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 51.5
Phvul.003G076300 Phaseolus vulgaris HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 52.3
TWI14G1077 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 53.8
VMungo1215G2990 Vigna mungo HOM05D003404 ORTHO05D004052 7.4e-25 117.9 132 52.3
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 9.7e-25 117.5 132 53.8
FvH4_7g33400 Fragaria vesca HOM05D003404 ORTHO05D004052 9.7e-25 117.5 128 56.2
FAN01G2685 Fragaria x ananassa HOM05D003404 ORTHO05D004052 9.7e-25 117.5 128 56.2
Lalb_Chr18g0061171 Lupinus albus HOM05D003404 ORTHO05D004052 9.7e-25 117.5 132 53.0
FAN03G0122 Fragaria x ananassa HOM05D003404 ORTHO05D004052 1.3e-24 117.1 128 56.2
Gohir.A06G144600 Gossypium hirsutum HOM05D003404 ORTHO05D004052 1.7e-24 116.7 118 56.8
Gohir.D06G150300 Gossypium hirsutum HOM05D003404 ORTHO05D004052 1.7e-24 116.7 118 56.8
TWI59G0557 Tripterygium wilfordii HOM05D003404 ORTHO05D004052 1.7e-24 116.7 132 51.5
ClCG10G007400 Citrullus lanatus HOM05D003404 ORTHO05D004052 2.2e-24 116.3 132 52.3
MELO3C016463.2 Cucumis melo HOM05D003404 ORTHO05D004052 2.2e-24 116.3 132 52.3
Psat4g002640 Pisum sativum HOM05D003404 ORTHO05D004052 2.8e-24 115.9 132 53.0
Sabra03G0000100 Salix brachista HOM05D003404 ORTHO05D004052 2.8e-24 115.9 132 52.3
Lalb_Chr15g0090861 Lupinus albus HOM05D003404 ORTHO05D004052 4.8e-24 115.2 132 51.5
Medtr4g134620 Medicago truncatula HOM05D003404 ORTHO05D004052 4.8e-24 115.2 132 53.0
CANSAT21G0984 Cannabis sativa HOM05D003404 ORTHO05D004052 6.3e-24 114.8 132 53.0
Lj4g0008829 Lotus japonicus HOM05D003404 ORTHO05D004052 6.3e-24 114.8 132 51.5
Eucgr.G00074 Eucalyptus grandis HOM05D003404 ORTHO05D004052 1.1e-23 114.0 132 51.5
TPR.G6014 Trifolium pratense HOM05D003404 ORTHO05D004052 1.1e-23 114.0 132 52.3
BcaC06g31225 Brassica carinata HOM05D003404 ORTHO05D004052 1.4e-23 113.6 134 50.7
Ah.03g136760 Amaranthus hybridus HOM05D003404 ORTHO05D004052 1.8e-23 113.2 132 53.0
CsaV3_3G006660 Cucumis sativus L. HOM05D003404 ORTHO05D004052 2.4e-23 112.8 132 50.8
Sc12g0008780 Simmondsia chinensis HOM05D003404 ORTHO05D004052 2.4e-23 112.8 132 52.3
ECA236G3319 Erigeron canadensis HOM05D003404 ORTHO05D004052 3.1e-23 112.5 132 49.2
Thhalv10003535m.g Eutrema salsugineum HOM05D003404 ORTHO05D004052 3.1e-23 112.5 132 50.8
Sp2g13790 Schrenkiella parvula HOM05D003404 ORTHO05D004052 3.1e-23 112.5 132 50.8
unitig_27.g24934 Utricularia gibba HOM05D003404 ORTHO05D004052 3.1e-23 112.5 132 52.3
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 4.1e-23 112.1 132 50.0
AL5G11830 Arabidopsis lyrata HOM05D003404 ORTHO05D004052 5.3e-23 111.7 132 50.8
AT2G02560 Arabidopsis thaliana HOM05D003404 ORTHO05D004052 5.3e-23 111.7 132 50.8
BcaB07g30328 Brassica carinata HOM05D003404 ORTHO05D004052 5.3e-23 111.7 132 50.8
Carub.0005s0156 Capsella rubella HOM05D003404 ORTHO05D004052 5.3e-23 111.7 132 50.8
CARHR145090 Cardamine hirsuta HOM05D003404 ORTHO05D004052 5.3e-23 111.7 132 50.8
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 6.9e-23 111.3 133 51.1
A02p33040 Brassica napus HOM05D003404 ORTHO05D004052 9.1e-23 110.9 132 50.8
C02p50810 Brassica napus HOM05D003404 ORTHO05D004052 9.1e-23 110.9 132 50.8
BolC2t11162H Brassica oleracea HOM05D003404 ORTHO05D004052 9.1e-23 110.9 132 50.8
BraA02t08325Z Brassica rapa HOM05D003404 ORTHO05D004052 9.1e-23 110.9 132 50.8
A06p43570 Brassica napus HOM05D003404 ORTHO05D004052 1.2e-22 110.5 132 50.0
BraA06t27242Z Brassica rapa HOM05D003404 ORTHO05D004052 1.2e-22 110.5 132 50.0
DCAR_001727 Daucus carota HOM05D003404 ORTHO05D004052 1.5e-22 110.2 133 51.1
C07p33270 Brassica napus HOM05D003404 ORTHO05D004052 2.0e-22 109.8 132 50.0
BolC7t43839H Brassica oleracea HOM05D003404 ORTHO05D004052 2.0e-22 109.8 132 50.0
BcaC03g17156 Brassica carinata HOM05D003404 ORTHO05D004052 3.4e-22 109.0 132 50.0
PGR042G3714 Punica granatum HOM05D003404 ORTHO05D004052 2.9e-21 105.9 132 49.2
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 2.9e-21 105.9 118 53.4
THA.LOC104805135 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 2.9e-21 105.9 132 48.5
Gorai.010G175500 Gossypium raimondii HOM05D003404 ORTHO05D004052 3.8e-21 105.5 146 45.9
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 5.0e-21 105.1 104 57.7
Aa31LG2G7580 Aethionema arabicum HOM05D003404 ORTHO05D004052 8.5e-21 104.4 132 47.7
HanXRQChr04g0110261 Helianthus annuus HOM05D003404 ORTHO05D004052 4.7e-19 98.6 127 51.2
THA.LOC104801780 Tarenaya hassleriana HOM05D003404 ORTHO05D004052 4.7e-19 98.6 132 46.2
SHI05020 Sapria himalayana HOM05D003404 ORTHO05D004052 1.4e-18 97.1 132 45.5
HPP92_012171 Vanilla planifolia HOM05D017293 ORTHO05D019386 1.4e-18 97.1 46 97.8
Mapoly0029s0003 Marchantia polymorpha HOM05D003404 ORTHO05D004052 1.5e-17 93.6 127 48.8
arahy.Tifrunner.gnm1.ann1.V95A4R Arachis hypogaea HOM05D003404 ORTHO05D004052 4.4e-17 92.0 186 37.6
Zm00001eb207390 Zea mays HOM05D003404 ORTHO05D004052 2.2e-16 89.7 132 43.9
Pp3c4_6460 Physcomitrium patens HOM05D003404 ORTHO05D004052 3.7e-16 89.0 106 50.0
SMO364G0878 Selaginella moellendorffii HOM05D003404 ORTHO05D004052 1.8e-15 86.7 124 48.4
HPP92_012170 Vanilla planifolia HOM05D017293 ORTHO05D019386 3.1e-15 85.9 45 86.7
HPP92_012174 Vanilla planifolia HOM05D017293 ORTHO05D019386 9.1e-15 84.3 40 97.5
arahy.Tifrunner.gnm1.ann1.R2063T Arachis hypogaea HOM05D003404 ORTHO05D004052 2.6e-14 82.8 78 62.8
AagrBONN_evm.TU.Sc2ySwM_228.3869 Anthoceros agrestis HOM05D003404 ORTHO05D004052 4.5e-14 82.0 107 51.4
Pp3c8_3260 Physcomitrium patens HOM05D003404 ORTHO05D004052 1.0e-13 80.9 106 45.3
HPP92_012173 Vanilla planifolia HOM05D017293 ORTHO05D019386 1.3e-13 80.5 145 41.4
Ca_13528_v3 Cicer arietinum L. HOM05D003404 ORTHO05D004052 2.2e-13 79.7 90 50.0
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 7.2e-12 74.7 129 37.2
CBR_g18772 Chara braunii HOM05D003404 ORTHO05D004052 2.8e-08 62.8 106 37.7
HPP92_012175 Vanilla planifolia HOM05D017293 ORTHO05D019386 7.0e-07 58.2 136 36.8
arahy.Tifrunner.gnm1.ann1.M7XV95 Arachis hypogaea HOM05D003404 ORTHO05D004052 4.5e-06 55.5 77 46.8
arahy.Tifrunner.gnm1.ann1.GKM8IL Arachis hypogaea HOM05D003404 ORTHO05D004052 7.7e-06 54.7 163 34.4


User provided reference genes

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