Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010690 Vanilla planifolia HOM05D000246 ORTHO05D007179 3.4e-115 418.3 207 100.0
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 4.7e-32 142.1 194 46.9
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 4.7e-32 142.1 234 40.2
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 2.3e-31 139.8 214 41.6
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 4.0e-31 139.0 210 45.7
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 4.0e-31 139.0 213 44.1
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 5.2e-31 138.7 217 40.6
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 2.0e-30 136.7 206 45.1
Lj5A421T63 Lonicera japonica HOM05D000246 ORTHO05D007179 2.6e-30 136.3 211 41.7
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 2.6e-30 136.3 214 42.5
CDE01G0252 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 3.4e-30 136.0 207 42.5
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 4.4e-30 135.6 195 47.2
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 5.8e-30 135.2 201 38.8
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 1.3e-29 134.0 196 43.4
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 1.7e-29 133.7 200 46.5
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 2.9e-29 132.9 208 42.3
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 4.9e-29 132.1 214 40.7
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 6.4e-29 131.7 207 39.6
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 6.4e-29 131.7 224 39.3
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 8.3e-29 131.3 193 44.0
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 1.4e-28 130.6 214 42.5
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 1.9e-28 130.2 207 43.0
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 3.2e-28 129.4 209 41.6
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 4.1e-28 129.0 220 37.7
QL03p011605 Quercus lobata HOM05D000246 ORTHO05D007179 4.1e-28 129.0 207 42.0
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 7.0e-28 128.3 196 42.3
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 9.2e-28 127.9 202 40.1
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 9.2e-28 127.9 206 39.8
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 9.2e-28 127.9 221 38.9
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 3.5e-27 125.9 223 39.0
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 3.5e-27 125.9 210 42.4
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 4.6e-27 125.6 221 38.5
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 6.0e-27 125.2 213 39.9
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 6.0e-27 125.2 211 39.8
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 7.8e-27 124.8 213 40.4
CSS0023091 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.0e-26 124.4 214 40.2
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 1.3e-26 124.0 214 40.2
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 1.3e-26 124.0 212 39.6
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 3.0e-26 122.9 207 39.1
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.0e-26 122.9 221 38.0
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 3.9e-26 122.5 199 39.7
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 3.9e-26 122.5 214 38.3
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 3.9e-26 122.5 191 42.9
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 5.1e-26 122.1 208 36.1
Solyc01g099460.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 6.6e-26 121.7 213 40.4
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 8.6e-26 121.3 213 39.4
Dinv40315 Davidia involucrata HOM05D000246 ORTHO05D007179 2.5e-25 119.8 224 38.4
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 2.5e-25 119.8 213 39.4
Eucgr.H04508 Eucalyptus grandis HOM05D000246 ORTHO05D007179 4.3e-25 119.0 203 39.9
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 7.3e-25 118.2 211 37.9
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 9.5e-25 117.9 218 36.2
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 1.2e-24 117.5 214 38.3
Lalb_Chr21g0310611 Lupinus albus HOM05D000246 ORTHO05D007179 2.1e-24 116.7 197 38.6
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 2.1e-24 116.7 216 36.1
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.6e-24 115.9 201 39.3
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 3.6e-24 115.9 201 37.8
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 8.1e-24 114.8 220 37.7
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 1.1e-23 114.4 214 40.7
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 1.1e-23 114.4 211 36.0
SHI18109 Sapria himalayana HOM05D000246 ORTHO05D007179 1.1e-23 114.4 189 38.6
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 1.4e-23 114.0 211 38.9
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 1.8e-23 113.6 213 40.4
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 3.1e-23 112.8 192 39.6
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 4.0e-23 112.5 212 36.3
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 5.2e-23 112.1 216 37.5
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 5.2e-23 112.1 210 36.7
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 8.9e-23 111.3 208 37.5
RcHm_v2.0_Chr6g0295551 Rosa chinensis HOM05D000246 ORTHO05D007179 2.6e-22 109.8 211 37.0
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 3.4e-22 109.4 193 43.0
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 5.8e-22 108.6 209 37.3
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 5.8e-22 108.6 200 36.5
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 1.3e-21 107.5 197 38.1
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 1.7e-21 107.1 193 40.9
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 1.7e-21 107.1 200 35.0
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 2.2e-21 106.7 204 37.3
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 2.2e-21 106.7 204 37.3
Sc09g0003000 Simmondsia chinensis HOM05D000246 ORTHO05D007179 3.7e-21 105.9 213 37.6
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 3.7e-21 105.9 200 38.0
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 4.9e-21 105.5 201 36.3
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 4.9e-21 105.5 201 36.3
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.4e-20 104.0 209 35.9
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 1.4e-20 104.0 207 36.7
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 1.9e-20 103.6 201 36.3
Eucgr.F00584 Eucalyptus grandis HOM05D000246 ORTHO05D007179 3.2e-20 102.8 201 36.3
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 3.2e-20 102.8 209 36.4
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 4.1e-20 102.4 209 35.9
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 5.4e-20 102.1 209 39.7
VMungo0720G1583 Vigna mungo HOM05D000246 ORTHO05D007179 7.1e-20 101.7 205 36.6
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 2.1e-19 100.1 247 32.8
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 6.0e-19 98.6 238 34.0
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.5e-17 94.0 199 36.7
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 1.5e-17 94.0 186 38.7
MBI19_g30059_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.9e-17 93.6 149 41.6
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 9.5e-17 91.3 203 32.0
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 1.6e-16 90.5 175 37.1
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 1.6e-16 90.5 151 42.4
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 2.0e-14 83.6 201 31.8
Pp3c23_17960 Physcomitrium patens HOM05D000246 ORTHO05D007179 1.9e-12 77.0 213 32.9
DCAR_003347 Daucus carota HOM05D000246 ORTHO05D007179 1.0e-10 71.2 131 39.7
BolC7t44629H Brassica oleracea HOM05D000246 ORTHO05D007179 2.3e-10 70.1 96 40.6
C07p40990 Brassica napus HOM05D000246 ORTHO05D007179 3.9e-10 69.3 95 41.1
Os05g0150600 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D007179 1.1e-07 61.2 80 47.5
Eucgr.C00007 Eucalyptus grandis HOM05D000246 ORTHO05D007179 7.6e-06 55.1 54 50.0


User provided reference genes

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