Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008438 Vanilla planifolia HOM05D000329 ORTHO05D002132 0.0e+00 1226.5 608 100.0
TAR623G1282 Trochodendron aralioides HOM05D000329 ORTHO05D002132 5.6e-33 146.7 188 46.8
Os03g0151300 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D002132 1.1e-31 142.5 171 45.6
CSS0006398 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 6.9e-31 139.8 153 50.3
Zm00001eb403060 Zea mays HOM05D000329 ORTHO05D002132 1.5e-30 138.7 144 47.2
MBI18_g13999_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D002132 2.0e-30 138.3 149 49.0
Rhsim03G0118700 Rhododendron simsii HOM05D000329 ORTHO05D002132 3.4e-30 137.5 530 27.5
Nn2g11530 Nelumbo nucifera HOM05D000329 ORTHO05D002132 7.6e-30 136.3 192 42.7
Dinv31305 Davidia involucrata HOM05D000329 ORTHO05D002132 1.3e-29 135.6 138 51.4
THA.LOC104816419 Tarenaya hassleriana HOM05D000329 ORTHO05D002132 4.9e-29 133.7 192 41.7
Potri.010G224700 Populus trichocarpa HOM05D000329 ORTHO05D002132 6.4e-29 133.3 141 51.1
Aqoxy1G01193 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 8.4e-29 132.9 216 38.9
GSVIVG01016246001 Vitis vinifera HOM05D000329 ORTHO05D002132 8.4e-29 132.9 141 49.6
Sabra10G0173700 Salix brachista HOM05D000329 ORTHO05D002132 1.4e-28 132.1 143 49.7
CARHR209040 Cardamine hirsuta HOM05D000329 ORTHO05D002132 4.2e-28 130.6 243 35.8
Actinidia22442 Actinidia chinensis HOM05D000329 ORTHO05D002132 5.4e-28 130.2 198 41.4
Actinidia22444 Actinidia chinensis HOM05D000329 ORTHO05D002132 5.4e-28 130.2 198 41.4
vmacro07132 Vaccinium macrocarpon HOM05D000329 ORTHO05D002132 5.4e-28 130.2 530 29.4
Cpa.g.sc53.94 Carica papaya HOM05D000329 ORTHO05D002132 1.2e-27 129.0 141 48.2
Duzib106G0554 Durio zibethinus HOM05D000329 ORTHO05D002132 1.2e-27 129.0 164 46.3
Sp6g38510 Schrenkiella parvula HOM05D000329 ORTHO05D002132 1.2e-27 129.0 193 39.9
TWI63G1719 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 1.6e-27 128.6 176 43.8
COL.COLO4_12163 Corchorus olitorius HOM05D000329 ORTHO05D002132 2.7e-27 127.9 200 40.0
Duzib114G0407 Durio zibethinus HOM05D000329 ORTHO05D002132 2.7e-27 127.9 141 49.6
Potri.008G037800 Populus trichocarpa HOM05D000329 ORTHO05D002132 2.7e-27 127.9 141 48.9
Thecc.10G077000 Theobroma cacao HOM05D000329 ORTHO05D002132 2.7e-27 127.9 141 48.9
QL08p055278 Quercus lobata HOM05D000329 ORTHO05D002132 3.5e-27 127.5 138 47.8
Ciclev10030491m.g Citrus clementina HOM05D000329 ORTHO05D002132 6.0e-27 126.7 173 42.8
Actinidia06756 Actinidia chinensis HOM05D000329 ORTHO05D002132 7.9e-27 126.3 138 47.8
A10p31920 Brassica napus HOM05D000329 ORTHO05D002132 7.9e-27 126.3 258 34.5
BraA10t45236Z Brassica rapa HOM05D000329 ORTHO05D002132 7.9e-27 126.3 258 34.5
CiPaw.01G271100 Carya illinoinensis HOM05D000329 ORTHO05D002132 7.9e-27 126.3 138 49.3
Duzib128G0707 Durio zibethinus HOM05D000329 ORTHO05D002132 1.0e-26 125.9 154 46.1
C09p72630 Brassica napus HOM05D000329 ORTHO05D002132 1.8e-26 125.2 258 34.1
BolC9t60003H Brassica oleracea HOM05D000329 ORTHO05D002132 1.8e-26 125.2 258 34.1
AL6G13860 Arabidopsis lyrata HOM05D000329 ORTHO05D002132 3.0e-26 124.4 194 39.7
Haze_16862 Corylus avellana HOM05D000329 ORTHO05D002132 8.7e-26 122.9 202 40.1
Gohir.D05G296300 Gossypium hirsutum HOM05D000329 ORTHO05D002132 8.7e-26 122.9 164 43.9
Manes.07G097600 Manihot esculenta HOM05D000329 ORTHO05D002132 8.7e-26 122.9 141 46.1
Thhalv10012447m.g Eutrema salsugineum HOM05D000329 ORTHO05D002132 1.1e-25 122.5 193 38.3
Dinv36422 Davidia involucrata HOM05D000329 ORTHO05D002132 1.5e-25 122.1 138 47.8
Gorai.009G313100 Gossypium raimondii HOM05D000329 ORTHO05D002132 1.9e-25 121.7 164 43.3
Hma1.2p1_0366F.1_g136860 Hydrangea macrophylla HOM05D000329 ORTHO05D002132 1.9e-25 121.7 184 42.4
Carub.0006s0319 Capsella rubella HOM05D000329 ORTHO05D002132 2.5e-25 121.3 265 33.2
PSO063G2159 Papaver somniferum HOM05D000329 ORTHO05D002132 3.3e-25 120.9 146 42.5
TWI15G1243 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 3.3e-25 120.9 138 46.4
AT5G04240 Arabidopsis thaliana HOM05D000329 ORTHO05D002132 4.3e-25 120.6 193 39.4
Gohir.A05G296400 Gossypium hirsutum HOM05D000329 ORTHO05D002132 4.3e-25 120.6 164 43.3
PSO339G4719 Papaver somniferum HOM05D000329 ORTHO05D002132 4.3e-25 120.6 146 42.5
Prupe.2G211400 Prunus persica HOM05D000329 ORTHO05D002132 4.3e-25 120.6 189 40.7
Cfa001672 Carpinus fangiana HOM05D000329 ORTHO05D002132 7.4e-25 119.8 179 41.3
MD07G1172400 Malus domestica HOM05D000329 ORTHO05D002132 7.4e-25 119.8 189 45.5
CDE09G1119 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 1.6e-24 118.6 145 44.1
Atru.chr12.810 Acer truncatum HOM05D000329 ORTHO05D002132 3.7e-24 117.5 168 42.3
CANSAT56G4152 Cannabis sativa HOM05D000329 ORTHO05D002132 3.7e-24 117.5 181 40.9
CDE02G2525 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 6.2e-24 116.7 145 43.4
FAN10G1102 Fragaria x ananassa HOM05D000329 ORTHO05D002132 6.2e-24 116.7 192 41.1
RcHm_v2.0_Chr1g0362971 Rosa chinensis HOM05D000329 ORTHO05D002132 8.1e-24 116.3 194 41.2
FAN01G0929 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.1e-23 115.9 176 44.9
FAN03G3507 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.8e-23 115.2 192 40.6
FAN06G2463 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.8e-23 115.2 192 39.6
PGR142G3487 Punica granatum HOM05D000329 ORTHO05D002132 3.1e-23 114.4 186 39.8
Lalb_Chr02g0142281 Lupinus albus HOM05D000329 ORTHO05D002132 5.3e-23 113.6 604 25.7
Aa31LG1G21120 Aethionema arabicum HOM05D000329 ORTHO05D002132 6.9e-23 113.2 583 25.0
FAN10G1428 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.5e-22 112.1 174 42.5
MD01G1106000 Malus domestica HOM05D000329 ORTHO05D002132 1.5e-22 112.1 192 42.7
Eucgr.G02854 Eucalyptus grandis HOM05D000329 ORTHO05D002132 2.6e-22 111.3 141 46.8
FvH4_7g19090 Fragaria vesca HOM05D000329 ORTHO05D002132 3.4e-22 110.9 192 39.1
CsaV3_6G036580 Cucumis sativus L. HOM05D000329 ORTHO05D002132 9.9e-22 109.4 186 40.9
Sed0001069 Sechium edule HOM05D000329 ORTHO05D002132 9.9e-22 109.4 186 40.9
Sc20g0001640 Simmondsia chinensis HOM05D000329 ORTHO05D002132 1.3e-21 109.0 141 42.6
Cc02_g11210 Coffea canephora HOM05D000329 ORTHO05D002132 2.2e-21 108.2 227 35.2
Lj2A16T73 Lonicera japonica HOM05D000329 ORTHO05D002132 2.2e-21 108.2 142 40.8
ATR0680G118 Amborella trichopoda HOM05D000329 ORTHO05D002132 4.9e-21 107.1 146 41.1
ClCG08G007610 Citrullus lanatus HOM05D000329 ORTHO05D002132 4.9e-21 107.1 191 38.7
Hma1.2p1_0366F.1_g136870 Hydrangea macrophylla HOM05D000329 ORTHO05D002132 8.4e-21 106.3 191 40.8
Sabra08G0025500 Salix brachista HOM05D000329 ORTHO05D002132 1.9e-20 105.1 110 52.7
Glyma.20G181000 Glycine max HOM05D000329 ORTHO05D002132 5.5e-20 103.6 138 43.5
MSTRG.8139 Avicennia marina HOM05D000329 ORTHO05D002132 9.3e-20 102.8 138 39.9
Lj5g0007464 Lotus japonicus HOM05D000329 ORTHO05D002132 9.3e-20 102.8 185 37.3
Glyma.10G209600 Glycine max HOM05D000329 ORTHO05D002132 1.2e-19 102.4 138 43.5
Solyc04g028560.4 Solanum lycopersicum HOM05D000329 ORTHO05D002132 2.1e-19 101.7 142 40.8
CSS0002547 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 2.7e-19 101.3 125 47.2
Nitab4.5_0000064g0060 Nicotiana tabacum HOM05D000329 ORTHO05D002132 2.7e-19 101.3 141 41.1
CAN.G10.1 Capsicum annuum HOM05D000329 ORTHO05D002132 3.5e-19 100.9 556 24.3
Peaxi162Scf00621g00117 Petunia axillaris HOM05D000329 ORTHO05D002132 3.5e-19 100.9 141 40.4
SGA_v2.0_scaffold2G01369 Striga asiatica HOM05D000329 ORTHO05D002132 3.5e-19 100.9 182 34.6
SalBow6G3528 Salvia bowleyana HOM05D000329 ORTHO05D002132 4.6e-19 100.5 186 34.4
EL10Ac6g14200 Beta vulgaris HOM05D000329 ORTHO05D002132 6.0e-19 100.1 182 36.3
DCAR_015294 Daucus carota HOM05D000329 ORTHO05D002132 5.1e-18 97.1 169 34.3
Lalb_Chr06g0162451 Lupinus albus HOM05D000329 ORTHO05D002132 5.1e-18 97.1 163 38.0
Sopen04g015200 Solanum pennellii HOM05D000329 ORTHO05D002132 6.7e-18 96.7 184 35.3
arahy.Tifrunner.gnm1.ann1.Z1XI1M Arachis hypogaea HOM05D000329 ORTHO05D002132 8.7e-18 96.3 187 36.9
arahy.Tifrunner.gnm1.ann1.5T63VN Arachis hypogaea HOM05D000329 ORTHO05D002132 1.9e-17 95.1 187 36.9
Oeu032817.2 Olea europaea HOM05D000329 ORTHO05D002132 2.5e-17 94.7 229 31.9
Oeu031330.1 Olea europaea HOM05D000329 ORTHO05D002132 5.6e-17 93.6 204 31.4
AUR62014263 Chenopodium quinoa HOM05D000329 ORTHO05D002132 7.4e-17 93.2 141 39.7
Migut.F01729 Erythranthe guttata HOM05D000329 ORTHO05D002132 7.4e-17 93.2 188 35.1
Lsat_1_v5_gn_2_112720 Lactuca sativa HOM05D000329 ORTHO05D002132 9.6e-17 92.8 159 34.0
VMungo0720G0870 Vigna mungo HOM05D000329 ORTHO05D002132 9.6e-17 92.8 163 36.8
Phvul.007G096500 Phaseolus vulgaris HOM05D000329 ORTHO05D002132 1.3e-16 92.4 165 38.8
MELO3C019813.2 Cucumis melo HOM05D000329 ORTHO05D002132 1.6e-16 92.0 204 35.8
TPR.G1943 Trifolium pratense HOM05D000329 ORTHO05D002132 1.6e-16 92.0 139 39.6
HanXRQChr07g0194971 Helianthus annuus HOM05D000329 ORTHO05D002132 2.1e-16 91.7 162 34.0
AUR62038483 Chenopodium quinoa HOM05D000329 ORTHO05D002132 2.8e-16 91.3 141 39.7
Ca_10556_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 4.8e-16 90.5 184 35.9
Psat7g197000 Pisum sativum HOM05D000329 ORTHO05D002132 4.8e-16 90.5 156 36.5
HanXRQChr14g0456771 Helianthus annuus HOM05D000329 ORTHO05D002132 4.0e-15 87.4 148 33.8
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 4.0e-15 87.4 142 33.1
Medtr1g094740 Medicago truncatula HOM05D000329 ORTHO05D002132 5.3e-15 87.0 114 42.1
ECA238G3754 Erigeron canadensis HOM05D002910 ORTHO05D003235 7.6e-14 83.2 145 36.6
Psat6g182440 Pisum sativum HOM05D000329 ORTHO05D002132 1.7e-13 82.0 95 44.2
SEGI_26590 Sequoiadendron giganteum HOM05D000329 ORTHO05D002132 8.4e-13 79.7 156 34.6
Nitab4.5_0001849g0010 Nicotiana tabacum HOM05D000329 ORTHO05D002132 1.2e-11 75.9 141 36.9
Aqoxy3G02554 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 1.6e-11 75.5 84 44.0
Aqoxy5G03611 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 9.7e-09 66.2 109 36.7
Nn4g22484 Nelumbo nucifera HOM05D000329 ORTHO05D002132 1.3e-08 65.9 91 38.5
BcaC06g32126 Brassica carinata HOM05D000329 ORTHO05D002132 2.2e-08 65.1 192 28.6
Nn3g16603 Nelumbo nucifera HOM05D000329 ORTHO05D002132 2.2e-08 65.1 91 38.5
Rhsim05G0120500 Rhododendron simsii HOM05D000329 ORTHO05D002132 2.2e-08 65.1 65 53.8
TWI23G0872 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 2.2e-08 65.1 179 27.9
TWI09G0874 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 4.8e-08 63.9 129 32.6
TWI39G0078 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 6.3e-08 63.5 91 40.7
Psat4g065080 Pisum sativum HOM05D000329 ORTHO05D002132 1.1e-07 62.8 240 27.9
Os12g0279100 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D002132 1.8e-07 62.0 124 32.3
Sopen03g030710 Solanum pennellii HOM05D000329 ORTHO05D002132 1.8e-07 62.0 106 33.0
MD14G1165600 Malus domestica HOM05D000329 ORTHO05D002132 4.1e-07 60.8 166 30.1
Solyc03g111590.4 Solanum lycopersicum HOM05D000329 ORTHO05D002132 4.1e-07 60.8 106 33.0
CANSAT80G2211 Cannabis sativa HOM05D000329 ORTHO05D002132 5.3e-07 60.5 106 34.0
Glyma.06G174000 Glycine max HOM05D000329 ORTHO05D002132 5.3e-07 60.5 130 31.5
Oeu023470.1 Olea europaea HOM05D000329 ORTHO05D002132 5.3e-07 60.5 116 31.0
Manes.06G114100 Manihot esculenta HOM05D000329 ORTHO05D002132 6.9e-07 60.1 127 33.9
TPR.G38691 Trifolium pratense HOM05D000329 ORTHO05D002132 6.9e-07 60.1 135 29.6
Potri.012G092400 Populus trichocarpa HOM05D000329 ORTHO05D002132 1.2e-06 59.3 141 29.8
QL10p005509 Quercus lobata HOM05D000329 ORTHO05D002132 1.2e-06 59.3 168 29.2
Haze_07287 Corylus avellana HOM05D000329 ORTHO05D002132 1.5e-06 58.9 91 39.6
TAR371G0021 Trochodendron aralioides HOM05D000329 ORTHO05D002132 1.5e-06 58.9 91 35.2
VMungo1309G0990 Vigna mungo HOM05D000329 ORTHO05D002132 1.5e-06 58.9 134 32.1
Glyma.04G191900 Glycine max HOM05D000329 ORTHO05D002132 2.0e-06 58.5 126 31.0
MD06G1159300 Malus domestica HOM05D000329 ORTHO05D002132 2.0e-06 58.5 166 29.5
Medtr3g075210 Medicago truncatula HOM05D000329 ORTHO05D002132 2.0e-06 58.5 126 30.2
Ca_05569_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 2.6e-06 58.2 91 37.4
Gohir.A09G244800 Gossypium hirsutum HOM05D000329 ORTHO05D002132 2.6e-06 58.2 207 27.1
Lalb_Chr12g0202071 Lupinus albus HOM05D000329 ORTHO05D002132 2.6e-06 58.2 91 36.3
Nitab4.5_0001360g0100 Nicotiana tabacum HOM05D000329 ORTHO05D002132 2.6e-06 58.2 106 32.1
TAR629G0012 Trochodendron aralioides HOM05D000329 ORTHO05D002132 2.6e-06 58.2 91 36.3
Atru.chr9.996 Acer truncatum HOM05D000329 ORTHO05D002132 3.4e-06 57.8 91 38.5
Cpa.g.sc4.49 Carica papaya HOM05D000329 ORTHO05D002132 3.4e-06 57.8 185 27.6
Glyma.06G173800 Glycine max HOM05D000329 ORTHO05D002132 3.4e-06 57.8 168 26.2
Lalb_Chr13g0297471 Lupinus albus HOM05D000329 ORTHO05D002132 3.4e-06 57.8 95 36.8
RcHm_v2.0_Chr7g0191461 Rosa chinensis HOM05D000329 ORTHO05D002132 3.4e-06 57.8 145 31.0
Thecc.03G121300 Theobroma cacao HOM05D000329 ORTHO05D002132 3.4e-06 57.8 258 25.2
Migut.I00266 Erythranthe guttata HOM05D000329 ORTHO05D002132 4.5e-06 57.4 96 31.2
FAN04G3077 Fragaria x ananassa HOM05D000329 ORTHO05D002132 4.5e-06 57.4 117 31.6
Oeu045488.1 Olea europaea HOM05D000329 ORTHO05D002132 4.5e-06 57.4 136 28.7
Aa31LG4G17010 Aethionema arabicum HOM05D000329 ORTHO05D002132 5.9e-06 57.0 140 27.9
Thhalv10010068m.g Eutrema salsugineum HOM05D000329 ORTHO05D002132 5.9e-06 57.0 106 31.1
CAN.G472.44 Capsicum annuum HOM05D000329 ORTHO05D002132 7.7e-06 56.6 106 31.1
CDE07G1171 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 7.7e-06 56.6 151 25.8
FvH4_5g07090 Fragaria vesca HOM05D000329 ORTHO05D002132 7.7e-06 56.6 117 31.6
FAN08G1572 Fragaria x ananassa HOM05D000329 ORTHO05D002132 7.7e-06 56.6 117 31.6
FAN13G2326 Fragaria x ananassa HOM05D000329 ORTHO05D002132 7.7e-06 56.6 117 31.6
FAN18G2482 Fragaria x ananassa HOM05D000329 ORTHO05D002132 7.7e-06 56.6 117 31.6
Phvul.009G169700 Phaseolus vulgaris HOM05D000329 ORTHO05D002132 7.7e-06 56.6 146 30.1
ClCG03G003410 Citrullus lanatus HOM05D000329 ORTHO05D002132 1.0e-05 56.2 106 34.0
Glyma.04G192000 Glycine max HOM05D000329 ORTHO05D002132 1.0e-05 56.2 126 29.4
Manes.14G055900 Manihot esculenta HOM05D000329 ORTHO05D002132 1.0e-05 56.2 91 37.4
Potri.015G089000 Populus trichocarpa HOM05D000329 ORTHO05D002132 1.0e-05 56.2 155 27.7
Hund05623 Selenicereus undatus HOM05D000329 ORTHO05D002132 1.0e-05 56.2 91 36.3
Sc04g0001070 Simmondsia chinensis HOM05D000329 ORTHO05D002132 1.0e-05 56.2 109 33.9


User provided reference genes

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