Gene: Nitab4.5_0001849g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0001849g0010
  • Transcript Identifier Nitab4.5_0001849g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0001849 : 362611-381030 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0001849g0010.1
  • SR1-identifier Nta11g21760.1

Descriptions

  • Description Zinc finger, C2H2-like, JmjC domain, Zinc finger, C2H2, Transcription factor jumonji, JmjN, Zinc finger C2H2-type/integrase DNA-binding domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G04240
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic Os03g0151300
GO:0048577
ISO
PLAZA Integrative Orthologynegative regulation of short-day photoperiodism, flowering AT5G04240
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G04240
GO:0033169
ISO
PLAZA Integrative Orthologyhistone H3-K9 demethylation AT5G04240
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT5G04240
GO:0009741
ISO
PLAZA Integrative Orthologyresponse to brassinosteroid AT5G04240

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04240
GO:0032452
ISO
PLAZA Integrative Orthologyhistone demethylase activity Os03g0151300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G04240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR003349 JmjN domain
IPR003347 JmjC domain
IPR013087 Zinc finger C2H2-type
Mapman id Description
12.3.3.8.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)