Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 6.3e-103 377.5 195 100.0
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 3.1e-33 146.0 118 61.9
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 6.9e-33 144.8 114 62.3
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 9.0e-33 144.4 114 61.4
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 1.5e-32 143.7 114 62.3
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 3.4e-32 142.5 114 64.0
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 4.4e-32 142.1 114 62.3
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 7.6e-32 141.4 115 61.7
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 7.6e-32 141.4 114 63.2
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.2e-31 139.8 114 58.8
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 2.2e-31 139.8 114 58.8
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.8e-31 139.0 114 58.8
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 3.8e-31 139.0 114 60.5
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 4.9e-31 138.7 114 57.9
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 4.9e-31 138.7 115 58.3
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 4.9e-31 138.7 115 60.0
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 4.9e-31 138.7 114 57.9
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 1.1e-30 137.5 114 61.4
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.1e-30 137.5 114 61.4
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.1e-30 137.5 114 61.4
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.1e-30 137.5 114 59.6
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.4e-30 137.1 115 59.1
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 1.4e-30 137.1 115 61.7
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 1.4e-30 137.1 114 60.5
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.4e-30 137.1 114 61.4
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 1.9e-30 136.7 114 62.3
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 1.9e-30 136.7 114 62.3
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.9e-30 136.7 114 62.3
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 2.4e-30 136.3 121 59.5
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 3.2e-30 136.0 115 61.7
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 4.2e-30 135.6 114 58.8
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 4.2e-30 135.6 114 59.6
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 4.2e-30 135.6 114 61.4
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 4.2e-30 135.6 114 59.6
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 4.2e-30 135.6 114 58.8
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 5.4e-30 135.2 114 59.6
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 7.1e-30 134.8 114 61.4
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 7.1e-30 134.8 114 57.9
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.1e-30 134.8 114 61.4
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.1e-30 134.8 114 61.4
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.1e-30 134.8 114 61.4
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 9.3e-30 134.4 114 60.5
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.2e-29 134.0 114 60.5
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.6e-29 133.7 114 60.5
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 2.1e-29 133.3 114 57.0
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 2.7e-29 132.9 114 61.4
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 2.7e-29 132.9 114 61.4
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 6.0e-29 131.7 115 60.9
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 7.8e-29 131.3 114 60.5
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.8e-29 131.3 114 60.5
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 1.0e-28 131.0 114 57.9
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.3e-28 130.6 106 61.3
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 1.3e-28 130.6 114 58.8
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 1.7e-28 130.2 105 61.9
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 1.7e-28 130.2 114 57.9
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 1.7e-28 130.2 114 59.6
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 3.0e-28 129.4 115 56.5
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 3.0e-28 129.4 114 58.8
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 3.0e-28 129.4 115 60.0
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 6.6e-28 128.3 114 57.0
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 8.7e-28 127.9 114 55.3
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 8.7e-28 127.9 114 58.8
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 1.1e-27 127.5 114 57.9
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.5e-27 127.1 105 60.0
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.5e-27 127.1 114 56.1
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 1.9e-27 126.7 114 57.9
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.9e-27 126.7 114 55.3
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.9e-27 126.7 114 57.9
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 2.5e-27 126.3 114 56.1
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 2.5e-27 126.3 114 56.1
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 2.5e-27 126.3 114 55.3
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 3.3e-27 125.9 115 59.1
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 4.3e-27 125.6 119 53.8
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 5.6e-27 125.2 114 54.4
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 5.6e-27 125.2 114 54.4
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 5.6e-27 125.2 114 54.4
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 7.3e-27 124.8 114 51.8
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 1.3e-26 124.0 116 54.3
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 1.6e-26 123.6 114 54.4
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 1.6e-26 123.6 135 51.1
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 2.1e-26 123.2 115 53.0
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.8e-26 122.1 114 53.5
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.2e-26 121.7 101 58.4
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 8.1e-26 121.3 114 51.8
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 1.4e-25 120.6 114 52.6
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 5.3e-25 118.6 114 51.8
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 5.3e-25 118.6 114 52.6
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 6.9e-25 118.2 114 51.8
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 9.0e-25 117.9 114 51.8
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 9.0e-25 117.9 114 51.8
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 9.0e-25 117.9 114 50.0
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 1.5e-24 117.1 114 54.4
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 2.0e-24 116.7 105 56.2
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 2.2e-23 113.2 114 50.9
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 2.2e-23 113.2 116 51.7
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 4.9e-23 112.1 114 48.2
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 1.9e-22 110.2 101 54.5
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 2.4e-22 109.8 100 55.0
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 3.2e-22 109.4 135 45.9
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 5.4e-22 108.6 104 52.9
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 9.3e-22 107.8 114 48.2
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 9.3e-22 107.8 114 49.1
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 9.3e-22 107.8 114 49.1
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 1.2e-21 107.5 114 48.2
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.2e-21 107.5 114 48.2
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 2.1e-21 106.7 114 48.2
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 2.1e-21 106.7 114 48.2
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 3.5e-21 105.9 114 48.2
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 4.6e-21 105.5 114 48.2
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 7.9e-21 104.8 114 46.5
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 7.9e-21 104.8 114 48.2
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 7.9e-21 104.8 114 48.2
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.0e-20 104.4 135 43.7
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.3e-20 104.0 114 47.4
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 1.3e-20 104.0 110 47.3
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 3.9e-20 102.4 94 54.3
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 5.1e-20 102.1 68 70.6
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.1e-19 100.9 100 55.0
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 7.4e-19 98.2 101 50.5
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 5.8e-16 88.6 87 52.9
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 8.4e-15 84.7 53 67.9
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.0e-12 77.8 104 45.2
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 1.6e-10 70.5 84 45.2
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 4.8e-10 68.9 69 53.6
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 8.4e-07 58.2 96 40.6


User provided reference genes

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