Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 9.3e-165 583.6 315 100.0
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 7.4e-53 211.8 327 40.7
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 1.3e-49 201.1 322 41.3
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 3.5e-47 193.0 307 38.4
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 5.1e-46 189.1 329 42.2
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 8.7e-46 188.3 302 37.4
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 3.3e-45 186.4 335 39.4
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 4.8e-44 182.6 324 35.8
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 8.2e-44 181.8 320 37.5
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.4e-43 181.0 326 35.3
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 1.8e-43 180.6 322 37.9
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.4e-43 180.3 329 35.0
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 3.1e-43 179.9 309 35.6
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 4.1e-43 179.5 329 35.3
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 6.9e-43 178.7 327 37.3
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 9.0e-43 178.3 350 36.6
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 9.0e-43 178.3 324 38.3
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 9.0e-43 178.3 189 46.0
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 1.5e-42 177.6 345 35.1
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 1.5e-42 177.6 348 37.1
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 2.0e-42 177.2 329 35.3
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.6e-42 176.8 337 35.6
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 3.4e-42 176.4 291 38.1
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 4.5e-42 176.0 301 37.2
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.0e-41 174.9 327 35.2
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 1.7e-41 174.1 298 37.2
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 2.2e-41 173.7 298 37.2
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 3.8e-41 172.9 352 33.8
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 3.8e-41 172.9 174 46.6
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 5.0e-41 172.6 333 35.7
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 6.5e-41 172.2 321 35.2
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 8.5e-41 171.8 334 35.0
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 8.5e-41 171.8 169 48.5
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 3.2e-40 169.9 338 33.4
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 5.5e-40 169.1 212 41.5
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 7.2e-40 168.7 393 33.8
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 7.2e-40 168.7 313 37.7
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 9.4e-40 168.3 303 37.3
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 1.6e-39 167.5 332 34.9
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 6.1e-39 165.6 249 39.4
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 6.1e-39 165.6 330 35.5
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 1.0e-38 164.9 338 34.9
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 1.0e-38 164.9 198 46.0
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 1.8e-38 164.1 296 35.8
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 2.3e-38 163.7 228 40.8
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 2.3e-38 163.7 171 48.0
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 2.3e-38 163.7 312 35.9
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 5.1e-38 162.5 170 47.6
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 6.7e-38 162.2 361 34.9
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 8.8e-38 161.8 175 45.7
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 8.8e-38 161.8 340 34.1
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 1.1e-37 161.4 341 33.7
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 1.1e-37 161.4 322 36.0
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.5e-37 161.0 225 40.9
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 1.5e-37 161.0 178 46.1
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 1.5e-37 161.0 294 35.7
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 1.9e-37 160.6 199 44.2
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 1.9e-37 160.6 333 33.6
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 1.9e-37 160.6 198 43.4
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.5e-37 160.2 181 44.8
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 4.3e-37 159.5 194 42.3
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 9.7e-37 158.3 354 32.8
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 9.7e-37 158.3 308 35.4
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 8.2e-36 155.2 285 37.9
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 1.4e-35 154.5 320 35.0
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 2.4e-35 153.7 347 34.3
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 2.4e-35 153.7 312 34.0
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 3.1e-35 153.3 219 37.4
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 5.3e-35 152.5 244 38.1
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 6.9e-35 152.1 358 32.1
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 9.1e-35 151.8 190 44.2
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 9.1e-35 151.8 240 35.4
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 9.1e-35 151.8 182 42.3
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 1.2e-34 151.4 307 33.6
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 2.0e-34 150.6 214 39.7
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 2.0e-34 150.6 214 39.7
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.0e-34 150.6 182 42.3
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 2.6e-34 150.2 405 29.6
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 3.4e-34 149.8 162 45.1
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 3.4e-34 149.8 218 39.4
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 3.4e-34 149.8 216 40.3
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 3.4e-34 149.8 163 45.4
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 4.5e-34 149.4 162 45.1
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 4.5e-34 149.4 337 35.6
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 1.0e-33 148.3 216 39.8
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 2.2e-33 147.1 232 38.4
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 2.9e-33 146.7 251 37.5
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 3.8e-33 146.4 216 39.4
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 3.8e-33 146.4 383 31.1
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 6.5e-33 145.6 216 39.4
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 8.5e-33 145.2 184 44.0
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 2.5e-32 143.7 187 41.2
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 2.5e-32 143.7 214 38.8
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 9.4e-32 141.7 161 44.7
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 6.1e-31 139.0 153 45.8
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 6.7e-30 135.6 245 37.6
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 2.0e-29 134.0 222 35.6
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 2.6e-29 133.7 323 33.4
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 3.3e-29 133.3 174 43.7
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 6.3e-28 129.0 174 40.2
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.4e-27 127.9 259 35.9
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 4.5e-26 122.9 163 35.6
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 5.9e-26 122.5 308 32.1
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 5.9e-26 122.5 308 32.1
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 3.2e-24 116.7 200 33.0
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.2e-23 114.8 282 30.1
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 1.4e-22 111.3 187 36.9
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 1.4e-19 101.3 211 30.3
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 3.2e-16 90.1 149 34.9
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 5.3e-11 72.8 74 48.6
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 7.7e-10 68.9 77 42.9
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 8.8e-06 55.5 42 57.1


User provided reference genes

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