Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_004567 Vanilla planifolia HOM05D000181 ORTHO05D006133 3.3e-101 371.7 186 100.0
HPP92_028278 Vanilla planifolia HOM05D000181 ORTHO05D006133 9.0e-67 257.3 185 75.1
MD06G1038500 Malus domestica HOM05D000181 ORTHO05D006133 6.3e-20 101.7 97 52.6
GSVIVG01028703001 Vitis vinifera HOM05D000974 ORTHO05D006133 8.3e-20 101.3 142 44.4
Nitab4.5_0002589g0120 Nicotiana tabacum HOM05D000974 ORTHO05D006133 2.4e-19 99.8 111 46.8
Cfa016370 Carpinus fangiana HOM05D000181 ORTHO05D006133 4.1e-19 99.0 68 64.7
COL.COLO4_38259 Corchorus olitorius HOM05D000181 ORTHO05D006133 4.1e-19 99.0 116 44.0
Haze_00120 Corylus avellana HOM05D000181 ORTHO05D006133 4.1e-19 99.0 68 64.7
Sc13g0009650 Simmondsia chinensis HOM05D000181 ORTHO05D006133 4.1e-19 99.0 97 54.6
FvH4_5g23210 Fragaria vesca HOM05D000181 ORTHO05D006133 7.0e-19 98.2 90 54.4
Nn1g01843 Nelumbo nucifera HOM05D000181 ORTHO05D006133 7.0e-19 98.2 99 51.5
CANSAT21G2338 Cannabis sativa HOM05D000181 ORTHO05D006133 9.2e-19 97.8 112 48.2
PGSC0003DMG400009105 Solanum tuberosum HOM05D000181 ORTHO05D006133 9.2e-19 97.8 88 53.4
Peaxi162Scf00904g00110 Petunia axillaris HOM05D000181 ORTHO05D006133 2.0e-18 96.7 92 53.3
FAN18G1629 Fragaria x ananassa HOM05D000181 ORTHO05D006133 2.7e-18 96.3 90 53.3
Manes.14G008060 Manihot esculenta HOM05D000181 ORTHO05D006133 2.7e-18 96.3 68 63.2
FAN18G4301 Fragaria x ananassa HOM05D000181 ORTHO05D006133 3.5e-18 95.9 90 53.3
MBI06_g05044_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D006133 3.5e-18 95.9 118 46.6
Duzib205G0954 Durio zibethinus HOM05D000181 ORTHO05D006133 4.5e-18 95.5 86 51.2
CAN.G108.33 Capsicum annuum HOM05D000181 ORTHO05D006133 7.8e-18 94.7 69 62.3
PGR042G2481 Punica granatum HOM05D000181 ORTHO05D006133 7.8e-18 94.7 68 61.8
Thecc.03G193900 Theobroma cacao HOM05D000181 ORTHO05D006133 7.8e-18 94.7 68 58.8
TAR629G2510 Trochodendron aralioides HOM05D000181 ORTHO05D006133 1.0e-17 94.4 96 51.0
Sopen03g003290 Solanum pennellii HOM05D000181 ORTHO05D006133 1.3e-17 94.0 69 60.9
Nitab4.5_0005625g0030 Nicotiana tabacum HOM05D000974 ORTHO05D006133 1.7e-17 93.6 78 56.4
Solyc03g007330.3 Solanum lycopersicum HOM05D000181 ORTHO05D006133 1.7e-17 93.6 94 52.1
PSO135G0910 Papaver somniferum HOM05D000181 ORTHO05D006133 2.9e-17 92.8 70 64.3
ClCG00G002850 Citrullus lanatus HOM05D000181 ORTHO05D006133 3.9e-17 92.4 88 51.1
ClCG01G000540 Citrullus lanatus HOM05D000181 ORTHO05D006133 3.9e-17 92.4 88 51.1
Dinv05469 Davidia involucrata HOM05D000181 ORTHO05D006133 3.9e-17 92.4 103 50.5
Hund11681 Selenicereus undatus HOM05D000181 ORTHO05D006133 3.9e-17 92.4 83 57.8
MSTRG.8497 Avicennia marina HOM05D000181 ORTHO05D006133 5.0e-17 92.0 105 49.5
Gohir.D04G002800 Gossypium hirsutum HOM05D000181 ORTHO05D006133 5.0e-17 92.0 68 58.8
Gorai.012G003900 Gossypium raimondii HOM05D000181 ORTHO05D006133 5.0e-17 92.0 68 58.8
RcHm_v2.0_Chr7g0212141 Rosa chinensis HOM05D000181 ORTHO05D006133 5.0e-17 92.0 70 60.0
unitig_0.g326 Utricularia gibba HOM05D000181 ORTHO05D006133 6.6e-17 91.7 105 44.8
Dinv35311 Davidia involucrata HOM05D000181 ORTHO05D006133 8.6e-17 91.3 107 43.9
Gohir.A09G183800 Gossypium hirsutum HOM05D000181 ORTHO05D006133 8.6e-17 91.3 68 57.4
Oeu036102.1 Olea europaea HOM05D000181 ORTHO05D006133 8.6e-17 91.3 99 46.5
FAN08G0508 Fragaria x ananassa HOM05D000181 ORTHO05D006133 1.1e-16 90.9 68 60.3
Gorai.006G200600 Gossypium raimondii HOM05D000181 ORTHO05D006133 1.1e-16 90.9 68 55.9
PSO384G1158 Papaver somniferum HOM05D000181 ORTHO05D006133 1.1e-16 90.9 70 64.3
CiPaw.05G257100 Carya illinoinensis HOM05D000181 ORTHO05D006133 1.5e-16 90.5 68 58.8
CsaV3_5G000640 Cucumis sativus L. HOM05D000181 ORTHO05D006133 1.5e-16 90.5 88 47.7
Gohir.A05G413300 Gossypium hirsutum HOM05D000181 ORTHO05D006133 1.5e-16 90.5 68 55.9
Gohir.D09G178600 Gossypium hirsutum HOM05D000181 ORTHO05D006133 1.9e-16 90.1 68 55.9
QL09p010710 Quercus lobata HOM05D000181 ORTHO05D006133 1.9e-16 90.1 104 44.2
Ciclev10006435m.g Citrus clementina HOM05D000974 ORTHO05D006133 2.5e-16 89.7 76 51.3
FAN13G2920 Fragaria x ananassa HOM05D000181 ORTHO05D006133 2.5e-16 89.7 68 58.8
Lsat_1_v5_gn_2_134721 Lactuca sativa HOM05D000181 ORTHO05D006133 2.5e-16 89.7 110 44.5
Manes.06G158000 Manihot esculenta HOM05D000181 ORTHO05D006133 2.5e-16 89.7 68 60.3
Cc02_g01810 Coffea canephora HOM05D000181 ORTHO05D006133 3.3e-16 89.4 76 56.6
MELO3C005873.2 Cucumis melo HOM05D000181 ORTHO05D006133 3.3e-16 89.4 88 47.7
DCAR_010617 Daucus carota HOM05D000181 ORTHO05D006133 3.3e-16 89.4 122 41.8
Eucgr.A01496 Eucalyptus grandis HOM05D000181 ORTHO05D006133 3.3e-16 89.4 68 58.8
Actinidia34203 Actinidia chinensis HOM05D000181 ORTHO05D006133 4.3e-16 89.0 90 50.0
SGA_v2.0_scaffold44G16779 Striga asiatica HOM05D000181 ORTHO05D006133 5.6e-16 88.6 85 51.8
Migut.F00237 Erythranthe guttata HOM05D000181 ORTHO05D006133 9.5e-16 87.8 110 45.5
Prupe.5G026500 Prunus persica HOM05D000181 ORTHO05D006133 9.5e-16 87.8 88 51.1
TWI39G0839 Tripterygium wilfordii HOM05D000181 ORTHO05D006133 9.5e-16 87.8 97 49.5
Actinidia08631 Actinidia chinensis HOM05D000181 ORTHO05D006133 1.2e-15 87.4 102 46.1
Atru.chr1.243 Acer truncatum HOM05D000181 ORTHO05D006133 1.6e-15 87.0 68 54.4
A02p11240 Brassica napus HOM05D000181 ORTHO05D006133 1.6e-15 87.0 168 36.3
BcaC03g14448 Brassica carinata HOM05D000181 ORTHO05D006133 2.1e-15 86.7 111 41.4
C02p18600 Brassica napus HOM05D000181 ORTHO05D006133 2.1e-15 86.7 111 41.4
BolC2t08005H Brassica oleracea HOM05D000181 ORTHO05D006133 2.1e-15 86.7 111 41.4
CiPaw.06G008000 Carya illinoinensis HOM05D000181 ORTHO05D006133 2.1e-15 86.7 63 60.3
Potri.015G020700 Populus trichocarpa HOM05D000181 ORTHO05D006133 2.8e-15 86.3 76 57.9
Sp6g15350 Schrenkiella parvula HOM05D000181 ORTHO05D006133 2.8e-15 86.3 95 45.3
Sed0001619 Sechium edule HOM05D000181 ORTHO05D006133 3.6e-15 85.9 106 44.3
Cpa.g.sc3.58 Carica papaya HOM05D000181 ORTHO05D006133 4.7e-15 85.5 103 44.7
Glyma.13G041700 Glycine max HOM05D000181 ORTHO05D006133 4.7e-15 85.5 180 36.1
Sabra15G0015800 Salix brachista HOM05D000181 ORTHO05D006133 4.7e-15 85.5 115 47.0
TWI23G1106 Tripterygium wilfordii HOM05D000181 ORTHO05D006133 4.7e-15 85.5 94 47.9
CSS0034081 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 6.1e-15 85.1 109 46.8
AUR62006144 Chenopodium quinoa HOM05D000181 ORTHO05D006133 6.1e-15 85.1 102 46.1
HanXRQChr13g0392551 Helianthus annuus HOM05D000181 ORTHO05D006133 6.1e-15 85.1 128 43.0
CSS0014825 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 8.0e-15 84.7 89 48.3
AUR62019344 Chenopodium quinoa HOM05D000181 ORTHO05D006133 8.0e-15 84.7 100 48.0
arahy.Tifrunner.gnm1.ann1.R7S2XR Arachis hypogaea HOM05D000181 ORTHO05D006133 1.0e-14 84.3 104 44.2
CSS0040067 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D006133 1.0e-14 84.3 105 43.8
Glyma.14G124900 Glycine max HOM05D000181 ORTHO05D006133 1.0e-14 84.3 163 38.0
Aa31LG3G9310 Aethionema arabicum HOM05D000181 ORTHO05D006133 1.4e-14 84.0 93 46.2
arahy.Tifrunner.gnm1.ann1.YE8PZ8 Arachis hypogaea HOM05D000181 ORTHO05D006133 1.4e-14 84.0 70 57.1
BraA02t06186Z Brassica rapa HOM05D000181 ORTHO05D006133 1.4e-14 84.0 127 38.6
TAR636G3102 Trochodendron aralioides HOM05D000181 ORTHO05D006133 1.4e-14 84.0 60 63.3
Potri.012G000700 Populus trichocarpa HOM05D000181 ORTHO05D006133 1.8e-14 83.6 71 56.3
VMungo0647G0137 Vigna mungo HOM05D000181 ORTHO05D006133 1.8e-14 83.6 109 45.0
Lj3A909G43 Lonicera japonica HOM05D000181 ORTHO05D006133 2.3e-14 83.2 68 55.9
Lj1g0010823 Lotus japonicus HOM05D000181 ORTHO05D006133 2.3e-14 83.2 112 43.8
EL10Ac3g05340 Beta vulgaris HOM05D000181 ORTHO05D006133 3.1e-14 82.8 109 44.0
BcaB05g22020 Brassica carinata HOM05D000181 ORTHO05D006133 5.2e-14 82.0 67 53.7
Carub.0008s1337 Capsella rubella HOM05D000181 ORTHO05D006133 8.9e-14 81.3 64 56.2
AL8G27820 Arabidopsis lyrata HOM05D000181 ORTHO05D006133 1.5e-13 80.5 64 54.7
CARHR266240 Cardamine hirsuta HOM05D000181 ORTHO05D006133 1.5e-13 80.5 64 54.7
AT5G53170 Arabidopsis thaliana HOM05D000181 ORTHO05D006133 2.0e-13 80.1 64 54.7
Thhalv10012717m.g Eutrema salsugineum HOM05D000181 ORTHO05D006133 2.0e-13 80.1 67 53.7
Lalb_Chr04g0263691 Lupinus albus HOM05D000181 ORTHO05D006133 2.0e-13 80.1 73 54.8
TPR.G33321 Trifolium pratense HOM05D000181 ORTHO05D006133 2.0e-13 80.1 101 46.5
CDE02G1571 Ceratophyllum demersum HOM05D000181 ORTHO05D006133 3.4e-13 79.3 70 54.3
Medtr1g028390 Medicago truncatula HOM05D000181 ORTHO05D006133 3.4e-13 79.3 83 50.6
Aqoxy5G04193 Aquilegia oxysepala HOM05D000181 ORTHO05D006133 5.8e-13 78.6 90 44.4
Ca_12683_v3 Cicer arietinum L. HOM05D000181 ORTHO05D006133 9.8e-13 77.8 101 41.6
Ca_12688_v3 Cicer arietinum L. HOM05D000181 ORTHO05D006133 9.8e-13 77.8 101 41.6
Nn3g19039 Nelumbo nucifera HOM05D000181 ORTHO05D006133 1.3e-12 77.4 51 66.7
Phvul.001G062000 Phaseolus vulgaris HOM05D000181 ORTHO05D006133 1.7e-12 77.0 97 42.3
Oeu037107.1 Olea europaea HOM05D000181 ORTHO05D006133 3.7e-12 75.9 65 53.8
BcaB08g35680 Brassica carinata HOM05D000974 ORTHO05D006133 1.1e-11 74.3 67 52.2
HanXRQChr14g0462901 Helianthus annuus HOM05D000181 ORTHO05D006133 1.4e-11 73.9 81 53.1
Psat6g038040 Pisum sativum HOM05D000181 ORTHO05D006133 3.2e-11 72.8 120 37.5
BcaC04g20491 Brassica carinata HOM05D000181 ORTHO05D006133 5.4e-11 72.0 70 50.0
C09p42970 Brassica napus HOM05D000974 ORTHO05D006133 5.4e-11 72.0 70 50.0
BolC9t57166H Brassica oleracea HOM05D000974 ORTHO05D006133 5.4e-11 72.0 70 50.0
Glyma.06G126000 Glycine max HOM05D000181 ORTHO05D006133 1.6e-10 70.5 167 32.3
SGA_v2.0_scaffold192G40572 Striga asiatica HOM05D000181 ORTHO05D006133 3.5e-10 69.3 87 48.3
A10p10680 Brassica napus HOM05D000181 ORTHO05D006133 4.6e-10 68.9 121 33.9
BraA10t43149Z Brassica rapa HOM05D000181 ORTHO05D006133 1.0e-09 67.8 116 35.3
vmacro06563 Vaccinium macrocarpon HOM05D000181 ORTHO05D006133 1.7e-09 67.0 72 47.2
ATR0320G021 Amborella trichopoda HOM05D000181 ORTHO05D006133 3.0e-09 66.2 44 65.9
Lj1C1013G4 Lonicera japonica HOM05D000181 ORTHO05D006133 3.0e-09 66.2 59 52.5
VMungo1309G0972 Vigna mungo HOM05D000181 ORTHO05D006133 3.3e-08 62.8 149 31.5
ECA238G4119 Erigeron canadensis HOM05D000181 ORTHO05D006133 5.6e-08 62.0 47 57.4
Rhsim03G0200000 Rhododendron simsii HOM05D000181 ORTHO05D006133 5.6e-08 62.0 72 45.8
Zm00001eb358380 Zea mays HOM05D000181 ORTHO05D006133 1.2e-07 60.8 43 62.8
Phvul.009G054200 Phaseolus vulgaris HOM05D000181 ORTHO05D006133 2.8e-07 59.7 149 31.5
Mapoly0102s0019 Marchantia polymorpha HOM05D000181 ORTHO05D006133 1.4e-06 57.4 123 38.2


User provided reference genes

Program Settings