Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_002818 Vanilla planifolia HOM05D002628 ORTHO05D002785 2.8e-308 1061.2 584 100.0
HPP92_000545 Vanilla planifolia HOM05D002628 ORTHO05D002785 8.3e-143 511.5 617 53.3
Aqoxy6G02008 Aquilegia oxysepala HOM05D002628 ORTHO05D002785 7.5e-59 232.6 729 33.2
Dinv12687 Davidia involucrata HOM05D002628 ORTHO05D002785 4.5e-56 223.4 659 34.3
Nn1g07877 Nelumbo nucifera HOM05D002628 ORTHO05D002785 1.5e-54 218.4 686 31.5
Dinv19196 Davidia involucrata HOM05D002628 ORTHO05D002785 4.4e-51 206.8 664 32.1
Rhsim01G0255500 Rhododendron simsii HOM05D002628 ORTHO05D002785 7.5e-51 206.1 564 34.9
CiPaw.03G148700 Carya illinoinensis HOM05D002628 ORTHO05D002785 1.3e-50 205.3 655 33.0
Zm00001eb160310 Zea mays HOM05D002628 ORTHO05D002785 3.7e-50 203.8 623 33.1
Actinidia37601 Actinidia chinensis HOM05D002628 ORTHO05D002785 8.3e-50 202.6 694 32.4
Phvul.008G126600 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 8.3e-50 202.6 680 33.1
Zm00001eb160300 Zea mays HOM05D002628 ORTHO05D002785 8.3e-50 202.6 622 32.6
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 4.1e-49 200.3 691 31.8
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 9.2e-49 199.1 663 32.3
QL09p053994 Quercus lobata HOM05D002628 ORTHO05D002785 1.2e-48 198.7 673 33.3
Hund18389 Selenicereus undatus HOM05D002628 ORTHO05D002785 3.5e-48 197.2 676 31.8
Ca_26871_v3 Cicer arietinum L. HOM05D002628 ORTHO05D002785 7.8e-48 196.1 672 33.2
TAR633G2086 Trochodendron aralioides HOM05D002628 ORTHO05D002785 7.8e-48 196.1 676 33.1
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 1.0e-47 195.7 695 33.1
Actinidia23721 Actinidia chinensis HOM05D002628 ORTHO05D002785 1.3e-47 195.3 661 33.1
VMungo1383G0087 Vigna mungo HOM05D002628 ORTHO05D002785 3.0e-47 194.1 670 33.4
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 3.9e-47 193.7 673 33.1
CANSAT01G2524 Cannabis sativa HOM05D002628 ORTHO05D002785 5.0e-47 193.4 664 31.3
Cfa002577 Carpinus fangiana HOM05D002628 ORTHO05D002785 8.6e-47 192.6 670 33.3
Sabra02G0185300 Salix brachista HOM05D002628 ORTHO05D002785 5.6e-46 189.9 643 32.0
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 1.2e-45 188.7 686 31.8
TWI75G1871 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 8.0e-45 186.0 666 32.1
TAR362G0009 Trochodendron aralioides HOM05D002628 ORTHO05D002785 1.0e-44 185.7 628 31.4
Actinidia09479 Actinidia chinensis HOM05D002628 ORTHO05D002785 1.4e-44 185.3 662 31.9
Lalb_Chr19g0125651 Lupinus albus HOM05D002628 ORTHO05D002785 2.3e-44 184.5 566 34.1
MD10G1163500 Malus domestica HOM05D002628 ORTHO05D002785 1.5e-43 181.8 667 31.6
Potri.014G189900 Populus trichocarpa HOM05D002628 ORTHO05D002785 1.3e-42 178.7 673 30.8
vmacro14750 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 1.7e-42 178.3 565 34.3
RcHm_v2.0_Chr6g0284671 Rosa chinensis HOM05D002628 ORTHO05D002785 2.9e-42 177.6 516 33.5
VMungo0331G0007 Vigna mungo HOM05D002628 ORTHO05D002785 8.3e-42 176.0 664 31.6
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 1.1e-41 175.6 694 32.1
PSO675G2169 Papaver somniferum HOM05D002628 ORTHO05D002785 1.1e-41 175.6 672 31.1
Manes.13G047100 Manihot esculenta HOM05D002628 ORTHO05D002785 2.4e-41 174.5 678 31.6
Potri.002G243350 Populus trichocarpa HOM05D002628 ORTHO05D002785 2.4e-41 174.5 684 30.8
MD05G1174400 Malus domestica HOM05D002628 ORTHO05D002785 3.2e-41 174.1 522 35.2
CiPaw.04G105000 Carya illinoinensis HOM05D002628 ORTHO05D002785 7.0e-41 172.9 682 29.8
TPR.G31107 Trifolium pratense HOM05D002628 ORTHO05D002785 1.6e-40 171.8 667 30.3
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea HOM05D002628 ORTHO05D002785 2.7e-40 171.0 537 33.5
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 1.7e-39 168.3 719 30.0
Peaxi162Scf00517g00636 Petunia axillaris HOM05D002628 ORTHO05D002785 3.0e-39 167.5 654 32.6
Atru.chr5.2101 Acer truncatum HOM05D002628 ORTHO05D002785 5.0e-39 166.8 690 29.7
Phvul.010G018800 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 8.6e-39 166.0 676 31.5
Glyma.08G352600 Glycine max HOM05D002628 ORTHO05D002785 1.1e-38 165.6 664 31.5
CDE07G1586 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 5.6e-38 163.3 592 29.6
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea HOM05D002628 ORTHO05D002785 6.2e-37 159.8 537 35.0
Glyma.18G169600 Glycine max HOM05D002628 ORTHO05D002785 6.2e-37 159.8 672 31.2
Medtr7g056603 Medicago truncatula HOM05D002628 ORTHO05D002785 8.1e-37 159.5 683 30.0
GSVIVG01028685001 Vitis vinifera HOM05D002628 ORTHO05D002785 2.3e-36 157.9 479 33.6
Psat3g145600 Pisum sativum HOM05D002628 ORTHO05D002785 8.9e-36 156.0 651 30.4
PGSC0003DMG400017665 Solanum tuberosum HOM05D002628 ORTHO05D002785 8.9e-36 156.0 665 31.9
Lj1g0019543 Lotus japonicus HOM05D002628 ORTHO05D002785 1.2e-35 155.6 569 35.0
Sc05g0002110 Simmondsia chinensis HOM05D002628 ORTHO05D002785 1.5e-35 155.2 644 32.0
Oeu022247.1 Olea europaea HOM05D002628 ORTHO05D002785 2.6e-35 154.5 629 31.3
CDE04G0039 Ceratophyllum demersum HOM05D002628 ORTHO05D002785 9.8e-35 152.5 522 30.3
Oeu004073.1 Olea europaea HOM05D002628 ORTHO05D002785 1.7e-34 151.8 561 30.3
Lalb_Chr01g0022291 Lupinus albus HOM05D002628 ORTHO05D002785 2.9e-34 151.0 566 32.9
AUR62001094 Chenopodium quinoa HOM05D002628 ORTHO05D002785 3.7e-34 150.6 675 31.3
TWI18G0012 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 6.4e-34 149.8 574 31.2
MSTRG.12779 Avicennia marina HOM05D002628 ORTHO05D002785 1.1e-33 149.1 669 31.1
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 3.2e-33 147.5 699 30.6
SalBow3G0995 Salvia bowleyana HOM05D002628 ORTHO05D002785 3.2e-33 147.5 648 31.2
MELO3C021029.2 Cucumis melo HOM05D002628 ORTHO05D002785 4.1e-33 147.1 688 28.8
DCAR_012651 Daucus carota HOM05D002628 ORTHO05D002785 7.1e-33 146.4 511 30.3
Lj2C1130G3 Lonicera japonica HOM05D002628 ORTHO05D002785 1.2e-32 145.6 470 31.9
Solyc09g060080.4 Solanum lycopersicum HOM05D002628 ORTHO05D002785 1.2e-32 145.6 664 32.8
Sopen09g023690 Solanum pennellii HOM05D002628 ORTHO05D002785 1.2e-32 145.6 664 32.4
TWI36G1593 Tripterygium wilfordii HOM05D002628 ORTHO05D002785 1.2e-32 145.6 681 29.7
Duzib138G1695 Durio zibethinus HOM05D002628 ORTHO05D002785 1.6e-32 145.2 696 31.0
Gohir.A11G137900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.3e-31 142.1 701 30.4
Gorai.007G155000 Gossypium raimondii HOM05D002628 ORTHO05D002785 1.7e-31 141.7 701 30.0
Hund05562 Selenicereus undatus HOM05D002628 ORTHO05D002785 3.0e-31 141.0 599 31.1
AUR62008919 Chenopodium quinoa HOM05D002628 ORTHO05D002785 3.3e-30 137.5 645 29.0
Sopen06g034780 Solanum pennellii HOM05D002628 ORTHO05D002785 5.6e-30 136.7 656 30.9
EL10Ac7g17849 Beta vulgaris HOM05D002628 ORTHO05D002785 7.3e-30 136.3 675 31.4
FAN24G2878 Fragaria x ananassa HOM05D002628 ORTHO05D002785 7.3e-30 136.3 630 30.2
Haze_24810 Corylus avellana HOM05D002628 ORTHO05D002785 9.5e-30 136.0 273 39.2
Lalb_Chr03g0041701 Lupinus albus HOM05D002628 ORTHO05D002785 9.5e-30 136.0 633 28.9
Cc01_g16950 Coffea canephora HOM05D002628 ORTHO05D002785 1.2e-29 135.6 276 38.0
Lj1A87T37 Lonicera japonica HOM05D002628 ORTHO05D002785 1.2e-29 135.6 593 30.0
CsaV3_7G026060 Cucumis sativus L. HOM05D002628 ORTHO05D002785 2.1e-29 134.8 630 27.5
Nitab4.5_0003758g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 2.1e-29 134.8 666 30.6
FvH4_2g18860 Fragaria vesca HOM05D002628 ORTHO05D002785 2.8e-29 134.4 622 30.2
Gohir.D08G212600 Gossypium hirsutum HOM05D002628 ORTHO05D002785 4.7e-29 133.7 558 32.8
Hma1.2p1_0226F.1_g095630 Hydrangea macrophylla HOM05D002628 ORTHO05D002785 8.1e-29 132.9 256 38.3
Sed0004451 Sechium edule HOM05D002628 ORTHO05D002785 1.1e-28 132.5 565 30.1
Glyma.03G081300 Glycine max HOM05D002628 ORTHO05D002785 3.1e-28 131.0 665 28.3
SalBow6G7039 Salvia bowleyana HOM05D002628 ORTHO05D002785 3.1e-28 131.0 425 31.8
Nitab4.5_0001564g0060 Nicotiana tabacum HOM05D002628 ORTHO05D002785 4.0e-28 130.6 637 31.6
Gorai.004G226000 Gossypium raimondii HOM05D002628 ORTHO05D002785 6.8e-28 129.8 559 32.6
Os05g0593300 Oryza sativa ssp. japonica HOM05D002628 ORTHO05D002785 8.9e-28 129.4 621 31.7
Gohir.A07G201100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.5e-27 128.6 548 31.0
PGR083G0125 Punica granatum HOM05D002628 ORTHO05D002785 1.5e-27 128.6 555 30.8
Lj3g0004121 Lotus japonicus HOM05D002628 ORTHO05D002785 2.0e-27 128.3 612 27.8
Eucgr.H00795 Eucalyptus grandis HOM05D002628 ORTHO05D002785 5.8e-27 126.7 573 31.1
SalBow6G2694 Salvia bowleyana HOM05D002628 ORTHO05D002785 1.7e-26 125.2 617 28.5
Ah.15g093990 Amaranthus hybridus HOM05D002628 ORTHO05D002785 6.4e-26 123.2 576 28.3
Solyc06g083420.3 Solanum lycopersicum HOM05D002628 ORTHO05D002785 8.4e-26 122.9 645 29.6
Nitab4.5_0002223g0030 Nicotiana tabacum HOM05D002628 ORTHO05D002785 1.1e-25 122.5 655 30.5
vmacro02763 Vaccinium macrocarpon HOM05D002628 ORTHO05D002785 1.1e-25 122.5 557 28.0
ECA236G2127 Erigeron canadensis HOM05D002628 ORTHO05D002785 1.4e-25 122.1 515 30.3
Gohir.A08G194900 Gossypium hirsutum HOM05D002628 ORTHO05D002785 2.4e-25 121.3 558 32.6
Cpa.g.sc8.144 Carica papaya HOM05D002628 ORTHO05D002785 5.4e-25 120.2 417 32.6
CAN.G15.8 Capsicum annuum HOM05D002628 ORTHO05D002785 9.2e-25 119.4 469 34.3
DCAR_018575 Daucus carota HOM05D002628 ORTHO05D002785 9.2e-25 119.4 373 30.8
FAN27G0734 Fragaria x ananassa HOM05D002628 ORTHO05D002785 9.2e-25 119.4 622 28.9
Gohir.D11G144700 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.6e-24 118.6 655 29.3
CAN.G771.81 Capsicum annuum HOM05D002628 ORTHO05D002785 7.8e-24 116.3 579 29.4
Gohir.D07G207400 Gossypium hirsutum HOM05D002628 ORTHO05D002785 7.8e-24 116.3 628 29.8
Sed0013250 Sechium edule HOM05D002628 ORTHO05D002785 1.3e-23 115.5 658 27.1
Gorai.001G233800 Gossypium raimondii HOM05D002628 ORTHO05D002785 5.1e-23 113.6 630 29.5
SGA_v2.0_scaffold6G03236 Striga asiatica HOM05D002628 ORTHO05D002785 5.1e-23 113.6 462 32.3
CSS0031811 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 1.1e-22 112.5 522 30.1
Aa31LG9G4800 Aethionema arabicum HOM05D002628 ORTHO05D002785 5.6e-22 110.2 575 28.5
BraA03t13528Z Brassica rapa HOM05D002628 ORTHO05D002785 5.6e-22 110.2 539 30.4
Aa31LG8G11310 Aethionema arabicum HOM05D002628 ORTHO05D002785 4.7e-21 107.1 572 29.7
A03p43970 Brassica napus HOM05D002628 ORTHO05D002785 6.2e-21 106.7 539 30.2
Lsat_1_v5_gn_8_89820 Lactuca sativa HOM05D002628 ORTHO05D002785 1.8e-20 105.1 251 37.8
Carub.0003s2528 Capsella rubella HOM05D002628 ORTHO05D002785 2.4e-20 104.8 532 29.5
MSTRG.18000 Avicennia marina HOM05D002628 ORTHO05D002785 5.2e-20 103.6 640 29.4
CARHR101290 Cardamine hirsuta HOM05D002628 ORTHO05D002785 6.8e-20 103.2 412 30.1
AT3G24880 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 3.4e-19 100.9 529 28.9
HanXRQChr04g0108091 Helianthus annuus HOM05D002628 ORTHO05D002785 3.4e-19 100.9 449 29.6
Sp3g22600 Schrenkiella parvula HOM05D002628 ORTHO05D002785 3.4e-19 100.9 559 29.7
SpUn0027_0080 Schrenkiella parvula HOM05D002628 ORTHO05D002785 3.4e-19 100.9 559 29.7
Thhalv10002368m.g Eutrema salsugineum HOM05D002628 ORTHO05D002785 1.7e-18 98.6 414 32.9
Migut.N00620 Erythranthe guttata HOM05D002628 ORTHO05D002785 2.2e-18 98.2 658 26.4
BolC3t17718H Brassica oleracea HOM05D002628 ORTHO05D002785 3.8e-18 97.4 620 28.1
Actinidia28152 Actinidia chinensis HOM05D002628 ORTHO05D002785 4.9e-18 97.1 466 29.8
AL3G40640 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 1.9e-17 95.1 574 27.2
C03p54320 Brassica napus HOM05D002628 ORTHO05D002785 1.9e-17 95.1 620 28.2
Glyma.16G093800 Glycine max HOM05D002628 ORTHO05D002785 2.4e-17 94.7 483 28.6
BcaC01g03251 Brassica carinata HOM05D002628 ORTHO05D002785 2.7e-16 91.3 620 27.9
SGA_v2.0_scaffold3G01640 Striga asiatica HOM05D002628 ORTHO05D002785 2.7e-16 91.3 557 29.4
BcaB06g26704 Brassica carinata HOM05D002628 ORTHO05D002785 1.3e-15 89.0 576 29.0
ATR0796G299 Amborella trichopoda HOM05D002628 ORTHO05D002785 1.7e-15 88.6 203 36.0
AT3G24870 Arabidopsis thaliana HOM05D002628 ORTHO05D002785 6.6e-15 86.7 521 26.1
Migut.D02520 Erythranthe guttata HOM05D002628 ORTHO05D002785 1.1e-14 85.9 637 30.0
Eucgr.K02162 Eucalyptus grandis HOM05D002628 ORTHO05D002785 1.1e-14 85.9 475 30.3
Gohir.D07G163200 Gossypium hirsutum HOM05D002628 ORTHO05D002785 9.6e-14 82.8 596 27.3
C07p11110 Brassica napus HOM05D002628 ORTHO05D002785 1.3e-13 82.4 489 29.7
ECA248G1308 Erigeron canadensis HOM05D002628 ORTHO05D002785 3.6e-13 80.9 597 30.7
THA.LOC104821651 Tarenaya hassleriana HOM05D002628 ORTHO05D002785 3.6e-13 80.9 648 29.9
BolC7t41583H Brassica oleracea HOM05D002628 ORTHO05D002785 4.8e-13 80.5 501 29.1
ClCG09G008950 Citrullus lanatus HOM05D002628 ORTHO05D002785 6.2e-13 80.1 141 38.3
Rhsim13G0045600 Rhododendron simsii HOM05D002628 ORTHO05D002785 1.1e-12 79.3 351 31.6
Carub.0003s2526 Capsella rubella HOM05D002628 ORTHO05D002785 4.0e-12 77.4 681 24.7
BcaB08g34428 Brassica carinata HOM05D002628 ORTHO05D002785 9.0e-12 76.3 623 28.3
Gohir.A07G157100 Gossypium hirsutum HOM05D002628 ORTHO05D002785 1.2e-11 75.9 211 34.1
Gorai.001G187100 Gossypium raimondii HOM05D002628 ORTHO05D002785 9.9e-11 72.8 637 27.3
AL9U11010 Arabidopsis lyrata HOM05D002628 ORTHO05D002785 3.8e-10 70.9 530 27.2
HanXRQChr14g0445581 Helianthus annuus HOM05D002628 ORTHO05D002785 3.8e-10 70.9 143 39.2
CSS0050463 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 1.1e-09 69.3 443 28.2
BraA07t28522Z Brassica rapa HOM05D002628 ORTHO05D002785 3.2e-09 67.8 562 27.9
A07p07330 Brassica napus HOM05D002628 ORTHO05D002785 4.2e-09 67.4 562 27.9
ECA247G3882 Erigeron canadensis HOM05D002628 ORTHO05D002785 8.7e-07 59.7 273 28.6
Nitab4.5_0000045g0240 Nicotiana tabacum HOM05D002628 ORTHO05D002785 1.5e-06 58.9 505 28.7


User provided reference genes

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