Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 4.3e-76 288.1 167 100.0
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.1e-55 220.3 167 74.3
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 7.1e-55 217.6 167 77.2
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 9.3e-55 217.2 167 65.9
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 1.6e-54 216.5 167 72.5
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 7.9e-54 214.2 167 67.1
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 7.9e-54 214.2 167 67.1
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 1.3e-53 213.4 167 67.1
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 1.3e-53 213.4 167 71.3
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 1.8e-53 213.0 167 74.3
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.3e-53 212.6 165 66.7
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 3.0e-53 212.2 165 66.1
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.0e-53 212.2 165 66.1
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.0e-53 212.2 165 66.1
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 3.0e-53 212.2 167 66.5
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 3.0e-53 212.2 167 66.5
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 8.7e-53 210.7 167 71.9
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 8.7e-53 210.7 167 64.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 1.1e-52 210.3 167 69.5
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 1.5e-52 209.9 165 64.8
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 1.5e-52 209.9 166 63.9
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 2.5e-52 209.1 167 72.5
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 5.6e-52 208.0 167 68.9
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 7.4e-52 207.6 170 75.3
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 7.4e-52 207.6 171 63.2
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 7.4e-52 207.6 168 63.7
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 9.6e-52 207.2 167 70.1
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 1.3e-51 206.8 167 63.5
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.3e-51 206.8 165 64.8
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 1.3e-51 206.8 168 63.1
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 1.6e-51 206.5 165 64.2
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 2.1e-51 206.1 167 68.3
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 3.7e-51 205.3 167 62.3
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 3.7e-51 205.3 167 70.7
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 3.7e-51 205.3 169 74.6
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 4.8e-51 204.9 167 76.0
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 4.8e-51 204.9 170 62.9
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 6.2e-51 204.5 167 67.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 6.2e-51 204.5 167 72.5
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 6.2e-51 204.5 167 63.5
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 8.2e-51 204.1 165 64.2
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 8.2e-51 204.1 165 63.6
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 8.2e-51 204.1 167 67.7
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.1e-50 203.8 176 61.9
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.4e-50 203.4 165 65.5
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.4e-50 203.4 165 64.2
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.8e-50 203.0 167 74.9
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 6.9e-50 201.1 167 61.7
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 9.0e-50 200.7 167 61.1
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 1.5e-49 199.9 169 62.1
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 2.0e-49 199.5 167 74.3
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 2.0e-49 199.5 165 69.7
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 3.4e-49 198.7 175 69.7
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 3.4e-49 198.7 167 68.9
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 7.6e-49 197.6 167 59.9
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 1.0e-48 197.2 165 60.6
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 1.3e-48 196.8 167 67.7
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.7e-48 196.4 175 69.7
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 3.8e-48 195.3 165 61.2
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 3.8e-48 195.3 170 67.6
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 1.4e-47 193.4 167 67.7
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.4e-47 193.4 169 60.4
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 1.9e-47 193.0 165 58.8
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.9e-47 193.0 166 64.5
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 1.9e-47 193.0 184 56.5
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 2.5e-47 192.6 165 59.4
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 2.5e-47 192.6 165 59.4
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 2.5e-47 192.6 167 65.3
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 2.5e-47 192.6 189 55.0
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 3.2e-47 192.2 166 65.7
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 3.2e-47 192.2 165 58.8
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 3.2e-47 192.2 165 58.8
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 3.2e-47 192.2 165 58.8
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 5.5e-47 191.4 165 58.8
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 7.1e-47 191.0 165 58.8
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 7.1e-47 191.0 170 67.1
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 1.2e-46 190.3 165 58.8
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 1.6e-46 189.9 165 58.8
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 7.9e-46 187.6 155 61.9
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 1.0e-45 187.2 165 57.0
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 1.8e-45 186.4 166 59.6
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 3.0e-45 185.7 178 65.2
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 7.4e-44 181.0 181 64.1
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.3e-43 180.3 171 57.3
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 5.3e-42 174.9 166 56.6
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 1.2e-41 173.7 169 66.3
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 3.8e-40 168.7 133 75.2
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 8.5e-40 167.5 166 56.0
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.4e-39 166.8 167 58.1
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 2.1e-38 162.9 185 58.4
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 6.1e-38 161.4 186 52.2
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.0e-37 160.6 167 62.9
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 2.3e-29 132.9 166 57.2
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 3.9e-29 132.1 98 63.3
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 3.7e-27 125.6 79 74.7
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 7.7e-25 117.9 167 43.7
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 2.2e-24 116.3 93 58.1
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 2.2e-24 116.3 79 64.6
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 3.8e-24 115.5 116 56.9
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 2.5e-23 112.8 93 53.8
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.2e-23 112.5 84 63.1
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 8.0e-22 107.8 174 44.8
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 5.7e-20 101.7 56 78.6
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.7e-19 100.1 68 67.6
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 8.2e-19 97.8 54 75.9
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 4.1e-18 95.5 92 48.9
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 9.1e-18 94.4 56 78.6
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 5.9e-17 91.7 100 42.0
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.3e-16 90.5 53 75.5
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.2e-14 84.0 90 53.3
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 2.2e-11 73.2 102 51.0
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 2.8e-11 72.8 121 41.3
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 1.6e-09 67.0 52 67.3
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 5.9e-09 65.1 77 48.1
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 9.4e-07 57.8 133 36.1


User provided reference genes

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