Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.1e-93 345.1 174 100.0
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.5e-73 278.5 142 99.3
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.2e-43 179.5 143 62.2
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 2.9e-43 179.1 143 63.6
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 3.8e-43 178.7 142 62.7
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 3.8e-43 178.7 143 64.3
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 6.5e-43 177.9 143 63.6
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 6.5e-43 177.9 147 61.9
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 6.5e-43 177.9 143 61.5
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 6.5e-43 177.9 140 62.1
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.5e-42 176.8 143 61.5
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.5e-42 176.8 142 63.4
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 1.9e-42 176.4 142 61.3
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 2.5e-42 176.0 143 61.5
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 3.2e-42 175.6 144 63.2
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 3.2e-42 175.6 143 62.9
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 4.2e-42 175.3 141 61.7
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 7.2e-42 174.5 143 62.2
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 7.2e-42 174.5 143 62.9
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 9.4e-42 174.1 143 60.1
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 1.2e-41 173.7 143 62.2
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 2.1e-41 172.9 143 61.5
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 2.7e-41 172.6 141 60.3
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.7e-41 172.6 144 60.4
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 3.6e-41 172.2 143 60.8
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 3.6e-41 172.2 143 60.8
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 3.6e-41 172.2 143 60.1
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.7e-41 171.8 140 61.4
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 4.7e-41 171.8 143 61.5
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 6.1e-41 171.4 142 59.9
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 8.0e-41 171.0 140 61.4
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.0e-40 170.6 143 60.1
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.8e-40 169.9 143 60.1
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.3e-40 169.5 143 60.8
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.3e-40 169.5 144 59.7
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 3.0e-40 169.1 145 60.7
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 3.0e-40 169.1 141 60.3
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 3.0e-40 169.1 142 62.7
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 4.0e-40 168.7 143 60.8
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 6.7e-40 167.9 144 61.1
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 6.7e-40 167.9 141 58.2
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 8.8e-40 167.5 143 58.0
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 1.2e-39 167.2 143 58.7
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.2e-39 167.2 143 58.0
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.2e-39 167.2 142 58.5
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.0e-39 166.4 144 59.0
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 2.0e-39 166.4 144 60.4
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 2.0e-39 166.4 144 59.0
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 2.0e-39 166.4 143 58.0
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.6e-39 166.0 144 59.0
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.6e-39 166.0 144 57.6
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.6e-39 166.0 143 58.7
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.6e-39 166.0 143 58.7
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 2.6e-39 166.0 143 58.0
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 3.3e-39 165.6 140 58.6
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 3.3e-39 165.6 143 57.3
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 3.3e-39 165.6 143 58.0
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 7.5e-39 164.5 144 59.0
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 7.5e-39 164.5 144 59.7
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.5e-39 164.5 141 59.6
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 7.5e-39 164.5 143 59.4
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 9.7e-39 164.1 144 59.0
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.7e-38 163.3 144 59.7
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.7e-38 163.3 143 59.4
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.7e-38 163.3 143 56.6
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.8e-38 162.5 144 58.3
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.8e-38 162.5 144 58.3
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.8e-38 162.5 144 58.3
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 2.8e-38 162.5 141 57.4
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.8e-38 162.5 141 57.4
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.8e-38 162.5 141 56.0
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 3.7e-38 162.2 143 56.6
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 4.8e-38 161.8 143 54.5
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 4.8e-38 161.8 141 57.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 6.3e-38 161.4 143 55.2
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 6.3e-38 161.4 141 58.2
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 6.3e-38 161.4 166 54.2
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-37 160.6 141 56.0
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.4e-37 160.2 143 58.0
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 4.1e-37 158.7 143 54.5
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 1.6e-36 156.8 146 56.2
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 1.6e-36 156.8 141 56.0
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 2.0e-36 156.4 143 54.5
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.9e-36 154.8 143 55.2
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.0e-35 154.1 143 55.2
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 3.8e-35 152.1 143 55.9
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.1e-34 150.6 140 54.3
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.5e-34 150.2 141 56.7
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.5e-34 150.2 143 55.2
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 7.2e-34 147.9 131 55.0
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.2e-33 147.1 203 44.3
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 5.7e-31 138.3 143 46.9
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 5.7e-31 138.3 142 48.6
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.2e-30 136.3 108 62.0
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 2.2e-30 136.3 140 49.3
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 8.3e-30 134.4 143 53.8
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 4.1e-29 132.1 115 57.4
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 2.7e-28 129.4 143 51.7
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.3e-27 126.3 147 45.6
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 5.0e-27 125.2 148 48.6
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 4.2e-26 122.1 147 46.3
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 8.0e-25 117.9 142 47.9
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 1.0e-24 117.5 173 43.9
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 3.0e-24 115.9 145 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 5.7e-23 111.7 142 41.5
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 5.7e-23 111.7 143 42.7
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 9.8e-23 110.9 109 55.0
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 2.5e-18 96.3 146 42.5
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.8e-16 90.1 161 33.5
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 3.5e-12 75.9 41 87.8


User provided reference genes

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