Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_000881 Vanilla planifolia HOM05D005691 ORTHO05D007096 2.4e-215 751.9 377 100.0
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 4.2e-111 405.6 376 55.6
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 2.5e-108 396.4 371 55.8
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 2.4e-106 389.8 375 56.3
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 1.3e-104 384.0 369 55.3
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 6.4e-104 381.7 373 56.3
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 1.1e-103 380.9 355 54.4
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 2.4e-103 379.8 377 54.6
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 4.2e-103 379.0 361 55.4
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 5.5e-103 378.6 374 56.4
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 7.1e-103 378.3 371 54.4
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 7.1e-103 378.3 371 54.4
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 2.1e-102 376.7 365 54.0
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 3.5e-102 375.9 372 55.4
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 1.0e-101 374.4 365 53.4
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 1.0e-101 374.4 356 56.2
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 1.3e-101 374.0 361 55.4
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 3.0e-101 372.9 370 55.9
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 3.0e-101 372.9 363 55.6
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 3.9e-101 372.5 339 56.0
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 8.7e-101 371.3 362 55.2
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 1.1e-100 370.9 343 57.4
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 1.9e-100 370.2 378 52.6
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 2.5e-100 369.8 378 52.4
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 2.5e-100 369.8 381 52.2
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 2.5e-100 369.8 347 57.3
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 5.6e-100 368.6 363 55.1
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 9.6e-100 367.9 364 52.5
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 9.6e-100 367.9 363 55.4
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 9.6e-100 367.9 363 55.4
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 1.3e-99 367.5 371 56.1
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 6.2e-99 365.2 379 52.8
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 6.2e-99 365.2 362 55.2
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 1.4e-98 364.0 377 52.0
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 3.1e-98 362.8 355 54.6
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 4.0e-98 362.5 371 52.0
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 9.0e-98 361.3 354 55.6
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 1.5e-97 360.5 356 55.1
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 2.0e-97 360.1 356 55.1
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 2.0e-97 360.1 364 54.1
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 5.8e-97 358.6 363 54.0
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 5.8e-97 358.6 378 50.8
COL.COLO4_09229 Corchorus olitorius HOM05D005691 ORTHO05D007096 7.6e-97 358.2 353 54.7
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 7.6e-97 358.2 378 50.8
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.0e-96 357.8 363 54.0
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 1.0e-96 357.8 355 54.4
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 1.3e-96 357.5 380 50.8
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 1.7e-96 357.1 363 52.6
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 2.9e-96 356.3 357 54.6
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 3.8e-96 355.9 341 56.3
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 4.9e-96 355.5 378 50.3
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 1.1e-95 354.4 372 50.5
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 1.1e-95 354.4 356 54.8
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 1.1e-95 354.4 364 53.3
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.9e-95 353.6 357 53.5
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 2.1e-94 350.1 377 52.3
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 7.9e-94 348.2 362 53.9
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 1.3e-93 347.4 362 51.9
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 8.7e-93 344.7 359 52.9
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 1.3e-91 340.9 361 49.9
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 1.6e-91 340.5 388 50.8
CDE04G1592 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 1.1e-90 337.8 322 55.3
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 1.5e-89 334.0 350 53.4
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 2.6e-89 333.2 357 52.4
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 2.6e-89 333.2 372 49.5
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 3.4e-89 332.8 382 48.7
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 3.4e-89 332.8 365 50.4
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 5.9e-89 332.0 359 50.1
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 7.6e-89 331.6 371 48.2
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 1.7e-88 330.5 362 51.7
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 2.9e-88 329.7 381 48.0
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 2.9e-88 329.7 357 51.8
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 3.8e-88 329.3 359 51.5
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 6.5e-88 328.6 357 52.7
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 6.5e-88 328.6 349 52.7
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 8.5e-88 328.2 367 47.1
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 1.1e-87 327.8 373 49.1
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 1.4e-87 327.4 350 51.7
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 1.9e-87 327.0 371 49.3
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 3.2e-87 326.2 350 51.7
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 5.5e-87 325.5 350 52.0
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 5.5e-87 325.5 357 50.1
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 7.2e-87 325.1 373 48.8
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 7.2e-87 325.1 349 51.0
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 9.3e-87 324.7 350 51.4
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 1.2e-86 324.3 359 50.4
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 1.2e-86 324.3 350 51.4
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 1.2e-86 324.3 350 51.4
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 1.2e-86 324.3 349 52.1
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 2.7e-86 323.2 381 48.8
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 6.1e-86 322.0 491 41.5
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 1.0e-85 321.2 345 51.9
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 1.8e-85 320.5 383 48.6
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 3.0e-85 319.7 342 49.7
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 5.7e-84 315.5 352 50.0
Cpa.g.sc211.9 Carica papaya HOM05D005691 ORTHO05D007096 1.6e-83 313.9 321 55.8
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 8.2e-83 311.6 362 48.9
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 2.2e-80 303.5 372 50.0
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 3.8e-80 302.8 369 44.7
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 7.4e-76 288.5 336 47.0
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 2.8e-67 260.0 357 42.0
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 4.1e-66 256.1 338 43.8
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 2.1e-62 243.8 372 38.7
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 1.4e-53 214.5 351 37.3
C07p09950 Brassica napus HOM05D005691 ORTHO05D007096 1.2e-52 211.5 308 41.9
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 5.9e-49 199.1 287 43.2
Hma1.2p1_1825F.1_g304370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 5.2e-45 186.0 200 48.5
BolC7t41441H Brassica oleracea HOM05D005691 ORTHO05D007096 1.4e-42 177.9 299 40.1
Hma1.2p1_1825F.1_g304360 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.2e-41 174.9 152 62.5
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 2.0e-41 174.1 261 39.8
Hma1.2p1_0133F.1_g061390 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.9e-39 167.5 185 47.0
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 3.6e-38 163.3 327 33.9
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 1.5e-36 157.9 357 31.4
PGR042G0477 Punica granatum HOM05D005691 ORTHO05D007096 8.6e-24 115.5 126 52.4
SMO351G0109 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 7.3e-23 112.5 254 31.9
MCO12G144 Micromonas commoda HOM05D005691 ORTHO05D007096 1.5e-15 88.2 321 27.1
CSS0045948 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 8.9e-13 79.0 75 52.0
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 9.6e-07 58.9 44 63.6


User provided reference genes

Program Settings