Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.D09G140400 Gossypium hirsutum HOM05D004689 ORTHO05D006269 1.0e-156 557.0 343 100.0
Gorai.006G161000 Gossypium raimondii HOM05D004689 ORTHO05D006269 1.0e-156 557.0 343 100.0
Gohir.A09G144600 Gossypium hirsutum HOM05D004689 ORTHO05D006269 8.6e-156 553.9 343 99.7
Duzib128G1555 Durio zibethinus HOM05D004689 ORTHO05D006269 8.4e-143 510.8 343 89.5
Thecc.05G071600 Theobroma cacao HOM05D004689 ORTHO05D006269 2.0e-136 489.6 343 89.2
Thecc.05G071900 Theobroma cacao HOM05D004689 ORTHO05D006269 1.7e-135 486.5 343 89.2
Peaxi162Scf00407g00631 Petunia axillaris HOM05D004689 ORTHO05D006269 6.9e-129 464.5 348 79.0
FAN14G4883 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.6e-128 461.1 344 79.1
COL.COLO4_26909 Corchorus olitorius HOM05D004689 ORTHO05D006269 1.6e-125 453.4 343 86.6
PGSC0003DMG400003874 Solanum tuberosum HOM05D004689 ORTHO05D006269 3.0e-124 449.1 349 76.5
TAR369G0565 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.3e-123 445.7 354 78.2
TAR633G1835 Trochodendron aralioides HOM05D004689 ORTHO05D006269 3.3e-123 445.7 354 78.2
TWI74G0641 Tripterygium wilfordii HOM05D004689 ORTHO05D006269 3.7e-122 442.2 344 80.8
Sopen09g003300 Solanum pennellii HOM05D004689 ORTHO05D006269 3.1e-121 439.1 348 77.9
arahy.Tifrunner.gnm1.ann1.0YCB9L Arachis hypogaea HOM05D004689 ORTHO05D006269 5.3e-121 438.3 233 92.7
arahy.Tifrunner.gnm1.ann1.98D3Z3 Arachis hypogaea HOM05D004689 ORTHO05D006269 5.3e-121 438.3 233 92.7
FAN02G2373 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.5e-120 436.8 345 75.9
QL03p020097 Quercus lobata HOM05D004689 ORTHO05D006269 1.5e-120 436.8 349 78.5
Atru.chr8.1747 Acer truncatum HOM05D004689 ORTHO05D006269 2.0e-120 436.4 366 77.6
Glyma.15G005900 Glycine max HOM05D004689 ORTHO05D006269 9.9e-120 434.1 350 78.9
VMungo0917G0001 Vigna mungo HOM05D004689 ORTHO05D006269 9.9e-120 434.1 268 87.3
PSO541G4270 Papaver somniferum HOM05D004689 ORTHO05D006269 1.7e-119 433.3 334 81.1
Sed0022535 Sechium edule HOM05D004689 ORTHO05D006269 2.2e-119 433.0 234 91.5
DCAR_020804 Daucus carota HOM05D004689 ORTHO05D006269 2.9e-119 432.6 345 79.1
Potri.006G121300 Populus trichocarpa HOM05D004689 ORTHO05D006269 2.9e-119 432.6 348 79.0
Oeu042111.1 Olea europaea HOM05D004689 ORTHO05D006269 3.8e-119 432.2 359 74.7
Solyc09g008470.4 Solanum lycopersicum HOM05D004689 ORTHO05D006269 4.9e-119 431.8 354 78.0
GSVIVG01033687001 Vitis vinifera HOM05D004689 ORTHO05D006269 4.9e-119 431.8 233 91.4
CANSAT80G2663 Cannabis sativa HOM05D004689 ORTHO05D006269 6.4e-119 431.4 233 91.0
Cfa021476 Carpinus fangiana HOM05D004689 ORTHO05D006269 8.4e-119 431.0 346 78.3
Nn6g35217 Nelumbo nucifera HOM05D004689 ORTHO05D006269 8.4e-119 431.0 352 79.5
PSO675G8307 Papaver somniferum HOM05D004689 ORTHO05D006269 8.4e-119 431.0 334 78.4
CsaV3_3G036230 Cucumis sativus L. HOM05D004689 ORTHO05D006269 1.4e-118 430.3 234 90.6
Glyma.13G367400 Glycine max HOM05D004689 ORTHO05D006269 1.4e-118 430.3 268 85.1
Phvul.005G180000 Phaseolus vulgaris HOM05D004689 ORTHO05D006269 1.9e-118 429.9 258 87.6
Migut.J00456 Erythranthe guttata HOM05D004689 ORTHO05D006269 1.2e-117 427.2 340 73.5
FAN05G3347 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.2e-117 427.2 354 74.0
Lalb_Chr04g0254861 Lupinus albus HOM05D004689 ORTHO05D006269 1.2e-117 427.2 344 76.2
MSTRG.19190 Avicennia marina HOM05D004689 ORTHO05D006269 2.1e-117 426.4 361 75.6
Lalb_Chr10g0099851 Lupinus albus HOM05D004689 ORTHO05D006269 2.7e-117 426.0 351 75.2
MD12G1106500 Malus domestica HOM05D004689 ORTHO05D006269 2.7e-117 426.0 353 78.8
EL10Ac7g16690 Beta vulgaris HOM05D004689 ORTHO05D006269 3.5e-117 425.6 345 77.1
Ca_23152_v3 Cicer arietinum L. HOM05D004689 ORTHO05D006269 6.0e-117 424.9 329 78.7
FAN05G0091 Fragaria x ananassa HOM05D004689 ORTHO05D006269 7.9e-117 424.5 354 73.7
PGR119G0162 Punica granatum HOM05D004689 ORTHO05D006269 7.9e-117 424.5 332 81.0
Ciclev10012150m.g Citrus clementina HOM05D004689 ORTHO05D006269 1.0e-116 424.1 231 89.6
ECA238G3499 Erigeron canadensis HOM05D004689 ORTHO05D006269 1.3e-116 423.7 325 81.8
Eucgr.K02436 Eucalyptus grandis HOM05D004689 ORTHO05D006269 1.8e-116 423.3 220 93.6
SGA_v2.0_scaffold40G15470 Striga asiatica HOM05D004689 ORTHO05D006269 3.0e-116 422.5 359 73.0
CiPaw.10G001700 Carya illinoinensis HOM05D004689 ORTHO05D006269 3.9e-116 422.2 349 79.1
Lsat_1_v5_gn_1_52460 Lactuca sativa HOM05D004689 ORTHO05D006269 3.9e-116 422.2 327 77.4
Potri.016G097600 Populus trichocarpa HOM05D004689 ORTHO05D006269 3.9e-116 422.2 349 74.8
unitig_26.g9238 Utricularia gibba HOM05D004689 ORTHO05D006269 3.9e-116 422.2 234 88.0
MELO3C009381.2 Cucumis melo HOM05D004689 ORTHO05D006269 5.1e-116 421.8 243 87.2
Ah.15g091430 Amaranthus hybridus HOM05D004689 ORTHO05D006269 6.7e-116 421.4 233 88.4
CSS0004382 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 6.7e-116 421.4 233 88.4
CSS0024828 Camellia sinensis var. sinensis HOM05D004689 ORTHO05D006269 6.7e-116 421.4 233 88.4
FAN09G4523 Fragaria x ananassa HOM05D004689 ORTHO05D006269 1.5e-115 420.2 356 77.8
Lj3g0015942 Lotus japonicus HOM05D004689 ORTHO05D006269 1.5e-115 420.2 233 88.0
Ah.08g211440 Amaranthus hybridus HOM05D004689 ORTHO05D006269 2.5e-115 419.5 327 78.9
Actinidia32476 Actinidia chinensis HOM05D004689 ORTHO05D006269 3.3e-115 419.1 315 81.9
RcHm_v2.0_Chr7g0191101 Rosa chinensis HOM05D004689 ORTHO05D006269 4.3e-115 418.7 342 72.2
AUR62026953 Chenopodium quinoa HOM05D004689 ORTHO05D006269 7.4e-115 417.9 233 87.1
RcHm_v2.0_Chr3g0470901 Rosa chinensis HOM05D004689 ORTHO05D006269 9.6e-115 417.5 350 78.6
Medtr8g009970 Medicago truncatula HOM05D004689 ORTHO05D006269 1.3e-114 417.2 334 73.7
Hund19382 Selenicereus undatus HOM05D004689 ORTHO05D006269 1.3e-114 417.2 339 74.0
TPR.G17360 Trifolium pratense HOM05D004689 ORTHO05D006269 2.1e-114 416.4 235 87.7
Nitab4.5_0003314g0100 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.7e-114 415.6 348 80.2
THA.LOC104816037 Tarenaya hassleriana HOM05D004689 ORTHO05D006269 3.7e-114 415.6 228 89.0
Sc20g0005690 Simmondsia chinensis HOM05D004689 ORTHO05D006269 1.1e-113 414.1 234 88.0
Aa31LG5G4730 Aethionema arabicum HOM05D004689 ORTHO05D006269 1.4e-113 413.7 220 91.8
CARHR126450 Cardamine hirsuta HOM05D004689 ORTHO05D006269 1.4e-113 413.7 228 88.6
CDE06G0795 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 1.8e-113 413.3 236 87.3
Aqoxy2G01650 Aquilegia oxysepala HOM05D004689 ORTHO05D006269 3.1e-113 412.5 221 91.4
Prupe.7G125300 Prunus persica HOM05D004689 ORTHO05D006269 5.3e-113 411.8 349 77.7
CDE03G0163 Ceratophyllum demersum HOM05D004689 ORTHO05D006269 9.0e-113 411.0 236 86.9
Sp4g14930 Schrenkiella parvula HOM05D004689 ORTHO05D006269 2.0e-112 409.8 231 87.4
Hma1.2p1_0225F.1_g095000 Hydrangea macrophylla HOM05D004689 ORTHO05D006269 3.4e-112 409.1 339 79.4
Carub.0004s1393 Capsella rubella HOM05D004689 ORTHO05D006269 3.8e-111 405.6 228 87.7
AL4G28000 Arabidopsis lyrata HOM05D004689 ORTHO05D006269 4.9e-111 405.2 228 87.3
HanXRQChr13g0402661 Helianthus annuus HOM05D004689 ORTHO05D006269 6.5e-111 404.8 221 89.1
ClCG10G019870 Citrullus lanatus HOM05D004689 ORTHO05D006269 1.1e-110 404.1 254 81.1
C04p17070 Brassica napus HOM05D004689 ORTHO05D006269 1.4e-110 403.7 228 86.4
BolC4t23259H Brassica oleracea HOM05D004689 ORTHO05D006269 1.4e-110 403.7 228 86.4
A05p13300 Brassica napus HOM05D004689 ORTHO05D006269 1.9e-110 403.3 228 86.4
BraA05t20271Z Brassica rapa HOM05D004689 ORTHO05D006269 1.9e-110 403.3 228 86.4
AT2G32600 Arabidopsis thaliana HOM05D004689 ORTHO05D006269 2.5e-110 402.9 228 86.8
RhsimUnG0004400 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.2e-110 402.1 344 76.2
RhsimUnG0067800 Rhododendron simsii HOM05D004689 ORTHO05D006269 4.2e-110 402.1 344 76.2
Sabra06G0095500 Salix brachista HOM05D004689 ORTHO05D006269 4.2e-110 402.1 427 62.5
Thhalv10017051m.g Eutrema salsugineum HOM05D004689 ORTHO05D006269 3.5e-109 399.1 228 86.0
HPP92_017214 Vanilla planifolia HOM05D004689 ORTHO05D006269 6.0e-109 398.3 341 77.1
Lj3C990G15 Lonicera japonica HOM05D004689 ORTHO05D006269 1.8e-108 396.7 209 92.3
AagrBONN_evm.TU.Sc2ySwM_344.454 Anthoceros agrestis HOM05D004689 ORTHO05D006269 4.3e-107 392.1 234 84.2
Cc06_g04560 Coffea canephora HOM05D004689 ORTHO05D006269 2.2e-106 389.8 406 65.3
Zm00001eb398100 Zea mays HOM05D004689 ORTHO05D006269 2.8e-106 389.4 237 81.0
Pp3c15_8160 Physcomitrium patens HOM05D004689 ORTHO05D006269 3.7e-106 389.0 233 83.3
Mapoly0069s0004 Marchantia polymorpha HOM05D004689 ORTHO05D006269 1.2e-104 384.0 223 85.7
CBR_g54837 Chara braunii HOM05D004689 ORTHO05D006269 4.5e-104 382.1 233 82.4
Pp3c9_13030 Physcomitrium patens HOM05D004689 ORTHO05D006269 2.2e-103 379.8 229 83.0
Os03g0263500 Oryza sativa ssp. japonica HOM05D004689 ORTHO05D006269 1.1e-102 377.5 325 72.9
MD04G1088800 Malus domestica HOM05D004689 ORTHO05D006269 1.4e-102 377.1 208 90.9
Zm00001eb011590 Zea mays HOM05D004689 ORTHO05D006269 9.4e-102 374.4 237 79.3
SMO228G0117 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 4.8e-98 362.1 215 82.3
Carub.0007s3257 Capsella rubella HOM05D004689 ORTHO05D006269 1.2e-93 347.4 214 81.3
CAN.G1038.16 Capsicum annuum HOM05D004689 ORTHO05D006269 3.0e-92 342.8 302 74.5
AagrBONN_evm.TU.Sc2ySwM_344.3364 Anthoceros agrestis HOM05D004689 ORTHO05D006269 7.0e-89 331.6 181 90.6
Psat1g060440 Pisum sativum HOM05D004689 ORTHO05D006269 1.6e-85 320.5 336 53.9
MCO12G316 Micromonas commoda HOM05D004689 ORTHO05D006269 6.1e-85 318.5 214 73.8
Cre06.g252700 Chlamydomonas reinhardtii HOM05D004689 ORTHO05D006269 3.0e-84 316.2 208 74.0
Prupe.4G071900 Prunus persica HOM05D004689 ORTHO05D006269 1.5e-83 313.9 224 73.2
Manes.09G064318 Manihot esculenta HOM05D004689 ORTHO05D006269 9.1e-81 304.7 169 88.2
Cpa.g.sc87.109 Carica papaya HOM05D004689 ORTHO05D006269 3.2e-78 296.2 355 63.4
PRCOL_00004335 Prasinoderma coloniale HOM05D004689 ORTHO05D006269 4.0e-76 289.3 219 65.3
vmacro08797 Vaccinium macrocarpon HOM05D004689 ORTHO05D006269 9.7e-75 284.6 670 39.3
FvH4_6g16880 Fragaria vesca HOM05D004689 ORTHO05D006269 6.3e-74 282.0 289 65.7
SHI12393 Sapria himalayana HOM05D004689 ORTHO05D006269 1.8e-73 280.4 247 64.0
Haze_26764 Corylus avellana HOM05D004689 ORTHO05D006269 1.0e-71 274.6 184 74.5
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.5e-70 270.0 207 69.1
Dinv35815 Davidia involucrata HOM05D004689 ORTHO05D006269 8.3e-66 255.0 150 82.7
Dinv37340 Davidia involucrata HOM05D004689 ORTHO05D006269 5.5e-62 242.3 132 90.2
BcaB02g10459 Brassica carinata HOM05D004689 ORTHO05D006269 2.4e-57 226.9 195 65.1
Haze_19437 Corylus avellana HOM05D004689 ORTHO05D006269 2.0e-56 223.8 247 68.8
AUR62043425 Chenopodium quinoa HOM05D004689 ORTHO05D006269 1.3e-55 221.1 220 55.0
MBI17_g39322_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 6.8e-52 208.8 107 95.3
ATR0118G008 Amborella trichopoda HOM05D004689 ORTHO05D006269 1.5e-51 207.6 108 94.4
SEGI_10194 Sequoiadendron giganteum HOM05D004689 ORTHO05D006269 1.7e-50 204.1 245 64.9
VMungo0219G0001 Vigna mungo HOM05D004689 ORTHO05D006269 1.7e-50 204.1 107 93.5
AUR62043819 Chenopodium quinoa HOM05D004689 ORTHO05D006269 8.3e-50 201.8 108 88.0
Nitab4.5_0002373g0090 Nicotiana tabacum HOM05D004689 ORTHO05D006269 3.2e-49 199.9 218 71.6
Actinidia31313 Actinidia chinensis HOM05D004689 ORTHO05D006269 7.8e-48 195.3 102 91.2
TAR636G1083 Trochodendron aralioides HOM05D004689 ORTHO05D006269 1.1e-46 191.4 107 86.9
Nitab4.5_0000349g0010 Nicotiana tabacum HOM05D004689 ORTHO05D006269 5.6e-46 189.1 106 87.7
Haze_05755 Corylus avellana HOM05D004689 ORTHO05D006269 3.1e-44 183.3 241 63.9
SMO031G0002 Selaginella moellendorffii HOM05D004689 ORTHO05D006269 3.7e-42 176.4 92 91.3
Cc00_g23430 Coffea canephora HOM05D004689 ORTHO05D006269 9.2e-41 171.8 95 89.5
ATR0118G005 Amborella trichopoda HOM05D004689 ORTHO05D006269 6.0e-40 169.1 88 89.8
Cc00_g35330 Coffea canephora HOM05D004689 ORTHO05D006269 7.8e-40 168.7 95 88.4
AagrBONN_evm.TU.Sc2ySwM_344.3466 Anthoceros agrestis HOM05D004689 ORTHO05D006269 2.3e-39 167.2 113 74.3
MBI17_g39319_MAGBIO Magnolia biondii HOM05D004689 ORTHO05D006269 4.3e-38 162.9 224 64.3
Haze_06063 Corylus avellana HOM05D004689 ORTHO05D023802 6.8e-36 155.6 199 59.8
Psat0s2549g0120 Pisum sativum HOM05D004689 ORTHO05D006269 2.7e-32 143.7 77 87.0
Psat1g060480 Pisum sativum HOM05D004689 ORTHO05D006269 6.6e-31 139.0 71 91.5
Psat1g060520 Pisum sativum HOM05D004689 ORTHO05D006269 6.6e-31 139.0 71 91.5
Nitab4.5_0000349g0040 Nicotiana tabacum HOM05D004689 ORTHO05D006269 9.6e-22 108.6 80 68.8
Psat1g060600 Pisum sativum HOM05D004689 ORTHO05D006269 3.1e-20 103.6 58 84.5
Pp3c4_2800 Physcomitrium patens HOM05D004689 ORTHO05D006269 1.1e-17 95.1 132 50.8
Haze_13658 Corylus avellana HOM05D004689 ORTHO05D023802 5.1e-15 86.3 179 50.3
Psat4g215720 Pisum sativum HOM05D002324 ORTHO05D002380 1.9e-09 67.8 103 45.6
Dinv44323 Davidia involucrata HOM05D004689 ORTHO05D183653 7.1e-09 65.9 38 84.2
Dinv25427 Davidia involucrata HOM05D004689 ORTHO05D182071 1.2e-08 65.1 38 81.6
Haze_08899 Corylus avellana HOM05D004689 ORTHO05D165887 3.5e-08 63.5 167 59.3
Dinv29092 Davidia involucrata HOM05D004689 ORTHO05D185927 5.6e-06 56.2 44 63.6


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