Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 1.7e-102 375.9 186 100.0
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 4.1e-59 231.9 124 91.9
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 2.0e-58 229.6 124 90.3
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 1.3e-57 226.9 124 88.7
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 8.5e-57 224.2 124 88.7
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 7.9e-55 217.6 124 83.1
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 1.1e-53 213.8 124 81.5
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 2.2e-52 209.5 124 79.8
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 2.8e-52 209.1 124 80.6
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 1.1e-51 207.2 124 79.0
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.1e-51 205.7 124 79.8
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.1e-51 205.7 124 79.8
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 1.5e-50 203.4 126 80.2
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 1.7e-49 199.9 124 75.8
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 5.0e-49 198.4 124 75.0
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 6.5e-49 198.0 124 75.8
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 6.5e-49 198.0 124 76.6
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 8.5e-49 197.6 124 76.6
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 1.4e-48 196.8 124 75.0
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 3.2e-48 195.7 124 75.8
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 5.5e-48 194.9 124 76.6
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 7.2e-48 194.5 124 77.4
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 9.4e-48 194.1 124 71.8
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 1.2e-47 193.7 124 75.8
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.2e-47 193.7 124 75.8
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 1.2e-47 193.7 124 75.8
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 2.7e-47 192.6 124 76.6
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 4.7e-47 191.8 124 75.0
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 4.7e-47 191.8 124 72.6
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 6.1e-47 191.4 124 73.4
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 8.0e-47 191.0 133 70.7
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 1.0e-46 190.7 124 71.0
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.0e-46 190.7 124 75.8
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.8e-46 189.9 124 73.4
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.8e-46 189.9 124 73.4
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.8e-46 189.9 124 75.8
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 2.3e-46 189.5 124 75.8
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 3.0e-46 189.1 124 73.4
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.0e-46 189.1 134 70.9
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 3.9e-46 188.7 124 74.2
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 3.9e-46 188.7 124 73.4
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 6.7e-46 188.0 125 73.6
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 6.7e-46 188.0 124 73.4
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 1.1e-45 187.2 124 73.4
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 1.1e-45 187.2 125 74.4
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 1.5e-45 186.8 124 71.8
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.5e-45 186.8 124 72.6
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 2.0e-45 186.4 124 74.2
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 3.3e-45 185.7 124 70.2
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 4.4e-45 185.3 124 73.4
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 4.4e-45 185.3 124 74.2
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 5.7e-45 184.9 124 72.6
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 5.7e-45 184.9 124 74.2
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 5.7e-45 184.9 124 74.2
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 7.4e-45 184.5 124 73.4
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 9.7e-45 184.1 124 71.0
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 9.7e-45 184.1 124 73.4
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 1.7e-44 183.3 124 70.2
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 2.8e-44 182.6 124 71.8
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 3.7e-44 182.2 124 70.2
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 3.7e-44 182.2 124 67.7
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 3.7e-44 182.2 127 67.7
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 4.8e-44 181.8 124 68.5
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 8.2e-44 181.0 124 71.8
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 8.2e-44 181.0 134 67.9
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 1.1e-43 180.6 124 68.5
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.8e-43 179.9 124 67.7
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 1.8e-43 179.9 124 71.0
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 3.1e-43 179.1 124 67.7
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 4.1e-43 178.7 124 70.2
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 7.0e-43 177.9 134 69.4
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 9.1e-43 177.6 124 68.5
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 9.1e-43 177.6 124 67.7
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 2.6e-42 176.0 124 69.4
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 5.9e-42 174.9 124 66.1
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 1.3e-41 173.7 124 66.9
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 1.7e-41 173.3 124 66.9
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 3.8e-41 172.2 124 67.7
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 8.5e-41 171.0 124 66.1
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 1.1e-40 170.6 124 67.7
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 2.5e-40 169.5 124 65.3
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 4.2e-40 168.7 124 66.9
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 1.2e-39 167.2 124 68.5
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 2.1e-39 166.4 124 65.3
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 2.1e-39 166.4 124 66.1
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 2.7e-39 166.0 124 65.3
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 4.7e-39 165.2 124 65.3
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.0e-39 164.5 124 66.1
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 2.3e-38 162.9 124 62.9
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 2.3e-38 162.9 124 62.1
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 2.3e-38 162.9 124 62.9
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 3.0e-38 162.5 125 63.2
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 4.0e-38 162.2 124 62.9
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 6.7e-38 161.4 124 62.9
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 2.0e-37 159.8 124 61.3
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 3.3e-37 159.1 124 61.3
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 3.3e-37 159.1 124 61.3
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 3.1e-35 152.5 127 60.6
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 5.9e-34 148.3 124 58.9
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 7.7e-34 147.9 124 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 1.0e-33 147.5 127 57.5
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 1.0e-33 147.5 127 55.9
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 2.7e-31 139.4 167 46.1
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 6.8e-30 134.8 134 53.0
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 2.0e-29 133.3 130 48.5
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.9e-25 119.4 137 46.7
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 4.2e-24 115.5 124 53.2
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 1.2e-21 107.5 128 46.9
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 2.8e-20 102.8 65 72.3
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 1.3e-17 94.0 57 77.2
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 1.6e-10 70.5 167 28.7
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.0e-09 65.5 50 62.0
Hund10966 Selenicereus undatus HOM05D005074 ORTHO05D023363 6.6e-09 65.1 62 46.8
SHI12859 Sapria himalayana HOM05D005074 ORTHO05D023363 4.3e-08 62.4 138 32.6
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 2.8e-07 59.7 43 62.8
PSO675G8941 Papaver somniferum HOM05D005074 ORTHO05D006853 1.1e-06 57.8 104 30.8
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 1.8e-06 57.0 49 55.1
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 6.8e-06 55.1 57 45.6


User provided reference genes

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