Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G219050 Glycine max HOM05D000234 ORTHO05D037888 6.0e-77 290.8 151 100.0
Glyma.10G002700 Glycine max HOM05D000234 ORTHO05D000335 2.5e-51 205.7 134 78.4
Glyma.02G002500 Glycine max HOM05D000234 ORTHO05D000335 7.6e-48 194.1 134 75.4
VMungo0720G2285 Vigna mungo HOM05D000234 ORTHO05D000335 1.0e-44 183.7 133 72.9
Phvul.007G278600 Phaseolus vulgaris HOM05D000234 ORTHO05D000335 1.8e-44 183.0 133 73.7
Ca_05176_v3 Cicer arietinum L. HOM05D000234 ORTHO05D000335 2.3e-36 156.0 138 61.6
Lalb_Chr03g0037491 Lupinus albus HOM05D000234 ORTHO05D000335 2.4e-33 146.0 145 60.7
Ca_10840_v3 Cicer arietinum L. HOM05D000234 ORTHO05D000335 1.3e-31 140.2 139 60.4
Lj6g0007924 Lotus japonicus HOM05D000234 ORTHO05D000335 1.3e-31 140.2 139 63.3
Haze_11240 Corylus avellana HOM05D000234 ORTHO05D000335 6.5e-31 137.9 159 49.7
Glyma.10G242800 Glycine max HOM05D000234 ORTHO05D000335 3.2e-30 135.6 144 54.9
Psat6g103840 Pisum sativum HOM05D000234 ORTHO05D000335 1.6e-29 133.3 145 53.8
Cfa008427 Carpinus fangiana HOM05D000234 ORTHO05D000335 2.7e-29 132.5 156 49.4
Medtr1g041345 Medicago truncatula HOM05D000234 ORTHO05D000335 3.6e-29 132.1 145 55.2
Glyma.20G151400 Glycine max HOM05D000234 ORTHO05D000335 1.0e-28 130.6 144 53.5
MD16G1201200 Malus domestica HOM05D000234 ORTHO05D000335 1.8e-28 129.8 146 50.7
CiPaw.02G119700 Carya illinoinensis HOM05D000234 ORTHO05D000335 2.3e-28 129.4 158 49.4
Ciclev10004245m.g Citrus clementina HOM05D000234 ORTHO05D000335 3.0e-28 129.0 154 48.1
Phvul.007G062800 Phaseolus vulgaris HOM05D000234 ORTHO05D000335 3.0e-28 129.0 144 53.5
VMungo0720G0269 Vigna mungo HOM05D000234 ORTHO05D000335 5.1e-28 128.3 144 53.5
FAN22G0639 Fragaria x ananassa HOM05D000234 ORTHO05D000335 1.1e-27 127.1 157 47.1
MD13G1201400 Malus domestica HOM05D000234 ORTHO05D000335 1.1e-27 127.1 150 50.7
FvH4_4g01630 Fragaria vesca HOM05D000234 ORTHO05D000335 1.5e-27 126.7 157 47.8
FAN12G0565 Fragaria x ananassa HOM05D000234 ORTHO05D000335 1.5e-27 126.7 157 47.8
Dinv44582 Davidia involucrata HOM05D000234 ORTHO05D000335 2.6e-27 125.9 160 47.5
FAN17G0297 Fragaria x ananassa HOM05D000234 ORTHO05D000335 2.6e-27 125.9 157 47.1
DCAR_027248 Daucus carota HOM05D000234 ORTHO05D000335 4.4e-27 125.2 156 47.4
RcHm_v2.0_Chr4g0388231 Rosa chinensis HOM05D000234 ORTHO05D000335 4.4e-27 125.2 158 46.2
Dinv14051 Davidia involucrata HOM05D000234 ORTHO05D000335 9.7e-27 124.0 157 45.9
Thecc.04G240100 Theobroma cacao HOM05D000234 ORTHO05D000335 9.7e-27 124.0 156 47.4
TWI09G1339 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 9.7e-27 124.0 154 48.7
Lj5g0002096 Lotus japonicus HOM05D000234 ORTHO05D000335 1.7e-26 123.2 146 53.4
Prupe.1G022900 Prunus persica HOM05D000234 ORTHO05D000335 1.7e-26 123.2 156 46.8
Cpa.g.sc44.130 Carica papaya HOM05D000234 ORTHO05D000335 2.8e-26 122.5 155 46.5
Duzib212G0173 Durio zibethinus HOM05D000234 ORTHO05D000335 6.3e-26 121.3 156 46.8
Potri.010G081300 Populus trichocarpa HOM05D000234 ORTHO05D000335 6.3e-26 121.3 158 48.7
TPR.G32785 Trifolium pratense HOM05D000234 ORTHO05D000335 8.2e-26 120.9 147 53.1
TWI73G1268 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 1.1e-25 120.6 154 47.4
CANSAT78G2079 Cannabis sativa HOM05D000234 ORTHO05D000335 1.8e-25 119.8 152 46.7
GSVIVG01018054001 Vitis vinifera HOM05D000234 ORTHO05D000335 1.8e-25 119.8 135 49.6
Cc03_g04370 Coffea canephora HOM05D000234 ORTHO05D000335 3.1e-25 119.0 156 44.2
SalBow2G2363 Salvia bowleyana HOM05D000234 ORTHO05D000335 3.1e-25 119.0 152 47.4
Sopen09g031660 Solanum pennellii HOM05D000234 ORTHO05D000335 3.1e-25 119.0 147 46.3
Manes.15G033500 Manihot esculenta HOM05D000234 ORTHO05D000335 4.1e-25 118.6 155 47.1
Gorai.011G166600 Gossypium raimondii HOM05D000234 ORTHO05D000335 5.3e-25 118.2 156 45.5
TAR362G0236 Trochodendron aralioides HOM05D000234 ORTHO05D000335 9.1e-25 117.5 155 45.2
MSTRG.4068 Avicennia marina HOM05D000234 ORTHO05D000335 1.2e-24 117.1 155 46.5
Sabra09G0100400 Salix brachista HOM05D000234 ORTHO05D000335 1.2e-24 117.1 158 47.5
Sabra10G0061800 Salix brachista HOM05D000234 ORTHO05D000335 1.2e-24 117.1 158 47.5
Rhsim04G0196400 Rhododendron simsii HOM05D000234 ORTHO05D000335 1.5e-24 116.7 159 44.0
Lalb_Chr21g0304851 Lupinus albus HOM05D000234 ORTHO05D000335 2.0e-24 116.3 153 47.1
Gorai.006G243200 Gossypium raimondii HOM05D000234 ORTHO05D000335 2.6e-24 115.9 143 49.7
Duzib151G0872 Durio zibethinus HOM05D000234 ORTHO05D000335 3.4e-24 115.5 157 45.9
Gohir.A09G219800 Gossypium hirsutum HOM05D000234 ORTHO05D000335 3.4e-24 115.5 143 49.7
Peaxi162Scf00316g00027 Petunia axillaris HOM05D000234 ORTHO05D000335 3.4e-24 115.5 168 42.9
Gohir.A10G117500 Gossypium hirsutum HOM05D000234 ORTHO05D000335 4.5e-24 115.2 156 44.9
Gohir.D09G222000 Gossypium hirsutum HOM05D000234 ORTHO05D000335 4.5e-24 115.2 143 49.7
Solyc09g082830.4 Solanum lycopersicum HOM05D000234 ORTHO05D000335 7.7e-24 114.4 151 46.4
MELO3C006494.2 Cucumis melo HOM05D000234 ORTHO05D000335 1.0e-23 114.0 153 46.4
CsaV3_3G012840 Cucumis sativus L. HOM05D000234 ORTHO05D000335 1.0e-23 114.0 153 47.1
Gohir.D10G149500 Gossypium hirsutum HOM05D000234 ORTHO05D000335 1.0e-23 114.0 156 44.9
Actinidia04504 Actinidia chinensis HOM05D000234 ORTHO05D000335 1.3e-23 113.6 152 44.7
Manes.03G172500 Manihot esculenta HOM05D000234 ORTHO05D000335 1.3e-23 113.6 155 45.8
CAN.G1435.5 Capsicum annuum HOM05D000234 ORTHO05D000335 1.7e-23 113.2 153 44.4
Potri.008G158800 Populus trichocarpa HOM05D000234 ORTHO05D000335 2.2e-23 112.8 158 45.6
arahy.Tifrunner.gnm1.ann1.ZGE2UV Arachis hypogaea HOM05D000234 ORTHO05D000335 2.9e-23 112.5 165 49.1
QL06p000783 Quercus lobata HOM05D000234 ORTHO05D000335 2.9e-23 112.5 161 45.3
Sabra08G0121100 Salix brachista HOM05D000234 ORTHO05D000335 2.9e-23 112.5 159 46.5
arahy.Tifrunner.gnm1.ann1.WMH1YG Arachis hypogaea HOM05D000234 ORTHO05D000335 6.5e-23 111.3 166 48.8
Nn1g02473 Nelumbo nucifera HOM05D000234 ORTHO05D000335 6.5e-23 111.3 155 43.2
Oeu017765.1 Olea europaea HOM05D000234 ORTHO05D000335 6.5e-23 111.3 155 45.2
CiPaw.01G194600 Carya illinoinensis HOM05D000234 ORTHO05D000335 8.5e-23 110.9 156 45.5
Nitab4.5_0009595g0010 Nicotiana tabacum HOM05D000234 ORTHO05D000335 1.1e-22 110.5 152 44.1
Nitab4.5_0000224g0020 Nicotiana tabacum HOM05D000234 ORTHO05D000335 1.9e-22 109.8 152 44.7
DCAR_024186 Daucus carota HOM05D000234 ORTHO05D029206 3.2e-22 109.0 154 43.5
ClCG05G004800 Citrullus lanatus HOM05D000234 ORTHO05D000335 4.2e-22 108.6 153 45.1
Nn6g34182 Nelumbo nucifera HOM05D000234 ORTHO05D000335 9.4e-22 107.5 154 42.9
Aqoxy5G00389 Aquilegia oxysepala HOM05D000234 ORTHO05D000335 1.6e-21 106.7 157 43.3
Sed0014071 Sechium edule HOM05D000234 ORTHO05D000335 3.6e-21 105.5 155 42.6
vmacro08384 Vaccinium macrocarpon HOM05D000234 ORTHO05D000335 6.1e-21 104.8 159 41.5
TAR633G1419 Trochodendron aralioides HOM05D000234 ORTHO05D000335 7.9e-21 104.4 148 43.2
Lj6A646T84 Lonicera japonica HOM05D000234 ORTHO05D000335 1.1e-19 100.5 147 46.9
PSO210G3409 Papaver somniferum HOM05D000234 ORTHO05D000335 1.5e-19 100.1 148 47.3
Sed0027885 Sechium edule HOM05D000234 ORTHO05D000335 2.6e-19 99.4 155 40.0
PGSC0003DMG400030166 Solanum tuberosum HOM05D000234 ORTHO05D000335 7.4e-19 97.8 124 46.0
Medtr1g102630 Medicago truncatula HOM05D000234 ORTHO05D000335 6.3e-18 94.7 143 46.9
THA.LOC104801110 Tarenaya hassleriana HOM05D000234 ORTHO05D000335 8.2e-18 94.4 162 40.7
Aa31LG5G3470 Aethionema arabicum HOM05D000234 ORTHO05D000335 1.8e-17 93.2 156 40.4
CSS0041708 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 1.8e-17 93.2 162 39.5
PSO832G3779 Papaver somniferum HOM05D000234 ORTHO05D000335 1.8e-17 93.2 153 44.4
Oeu042979.1 Olea europaea HOM05D000234 ORTHO05D000335 2.4e-17 92.8 149 41.6
Actinidia40112 Actinidia chinensis HOM05D000234 ORTHO05D000335 5.0e-15 85.1 133 39.1
PGR142G3517 Punica granatum HOM05D000234 ORTHO05D000335 5.0e-15 85.1 159 40.3
MBI11_g33264_MAGBIO Magnolia biondii HOM05D000234 ORTHO05D000335 3.2e-14 82.4 144 38.2
Psat6g203240 Pisum sativum HOM05D000234 ORTHO05D000335 3.2e-14 82.4 133 41.4
HPP92_009623 Vanilla planifolia HOM05D000234 ORTHO05D000335 9.4e-14 80.9 140 37.9
Migut.G00412 Erythranthe guttata HOM05D000234 ORTHO05D000335 1.6e-13 80.1 152 42.8
Sc13g0004800 Simmondsia chinensis HOM05D000234 ORTHO05D000335 1.6e-13 80.1 152 42.8
Atru.chr4.2328 Acer truncatum HOM05D000234 ORTHO05D037888 6.1e-13 78.2 82 52.4
Eucgr.H00532 Eucalyptus grandis HOM05D000234 ORTHO05D000335 6.1e-13 78.2 148 39.2
unitig_749.g14083 Utricularia gibba HOM05D000234 ORTHO05D000335 6.7e-12 74.7 148 37.8
Lsat_1_v5_gn_9_79920 Lactuca sativa HOM05D000234 ORTHO05D000335 4.4e-11 72.0 157 36.9
CSS0033472 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 2.2e-10 69.7 50 64.0
Atru.chr4.2329 Acer truncatum HOM05D000234 ORTHO05D000335 3.7e-10 68.9 37 81.1
A06p47700 Brassica napus HOM05D000234 ORTHO05D000335 1.8e-09 66.6 148 34.5
Thhalv10003139m.g Eutrema salsugineum HOM05D000234 ORTHO05D000335 2.4e-09 66.2 143 37.8
Hma1.2p1_1311F.1_g274880 Hydrangea macrophylla HOM05D000234 ORTHO05D000335 9.1e-09 64.3 87 48.3
BraA06t27637Z Brassica rapa HOM05D000234 ORTHO05D000335 1.6e-08 63.5 147 35.4
COL.COLO4_13197 Corchorus olitorius HOM05D000234 ORTHO05D000335 5.9e-08 61.6 34 76.5
Sp2g08610 Schrenkiella parvula HOM05D000234 ORTHO05D000335 1.0e-07 60.8 151 38.4
BcaC06g34626 Brassica carinata HOM05D000234 ORTHO05D000335 1.3e-07 60.5 150 37.3
C07p26350 Brassica napus HOM05D000234 ORTHO05D000335 1.3e-07 60.5 150 37.3
BolC7t43163H Brassica oleracea HOM05D000234 ORTHO05D000335 1.3e-07 60.5 150 37.3
Migut.G00389 Erythranthe guttata HOM05D000234 ORTHO05D000335 2.2e-07 59.7 33 75.8
Psat6g203320 Pisum sativum HOM05D000234 ORTHO05D014456 2.9e-07 59.3 35 68.6
Psat3g071320 Pisum sativum HOM05D000234 ORTHO05D000335 3.8e-07 58.9 35 68.6
ATR0083G035 Amborella trichopoda HOM05D000234 ORTHO05D000335 8.5e-07 57.8 144 34.7
BcaC06g31677 Brassica carinata HOM05D000234 ORTHO05D000335 1.1e-06 57.4 154 36.4
AL8G16370 Arabidopsis lyrata HOM05D000234 ORTHO05D000335 5.5e-06 55.1 155 34.8
MBI04_g46124_MAGBIO Magnolia biondii HOM05D000234 ORTHO05D000335 5.5e-06 55.1 35 68.6
Nitab4.5_0004517g0010 Nicotiana tabacum HOM05D000234 ORTHO05D000335 7.2e-06 54.7 52 46.2


User provided reference genes

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