Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G186500 Glycine max HOM05D004933 ORTHO05D005465 1.1e-234 816.2 413 100.0
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 3.8e-182 641.7 360 92.5
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 2.5e-178 629.0 367 87.7
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 3.2e-165 585.5 367 81.7
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 9.4e-165 583.9 367 81.5
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 2.1e-164 582.8 367 81.2
Ca_05521_v3 Cicer arietinum L. HOM05D004933 ORTHO05D005465 2.4e-160 569.3 360 80.3
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 5.3e-160 568.2 360 81.4
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 5.3e-160 568.2 360 80.0
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 1.9e-157 559.7 360 79.4
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 3.3e-154 548.9 367 77.1
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.2e-119 434.1 370 63.0
VMungo0647G0811 Vigna mungo HOM05D004933 ORTHO05D005465 3.0e-118 429.5 272 85.7
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 8.6e-118 427.9 361 61.2
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 1.1e-117 427.6 361 61.2
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 5.6e-117 425.2 364 63.5
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 7.3e-117 424.9 371 62.3
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 9.5e-117 424.5 368 62.8
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 1.2e-116 424.1 368 61.1
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 8.0e-116 421.4 362 60.2
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 4.0e-115 419.1 363 62.5
Hma1.2p1_1805F.1_g303160 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.7e-113 413.7 364 61.8
Hma1.2p1_1805F.1_g303170 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.7e-113 413.7 364 61.8
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 1.7e-113 413.7 364 61.0
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 4.9e-113 412.1 365 61.6
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 6.4e-113 411.8 361 59.8
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 1.1e-112 411.0 388 58.5
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 4.1e-112 409.1 364 61.3
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 9.2e-112 407.9 364 62.1
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 9.2e-112 407.9 369 61.2
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 1.2e-111 407.5 360 61.1
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.6e-111 407.1 368 59.5
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 2.7e-111 406.4 367 59.4
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 3.5e-111 406.0 364 60.4
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 4.6e-111 405.6 364 60.7
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 7.8e-111 404.8 381 59.3
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 1.0e-110 404.4 361 60.4
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 1.6e-108 397.1 368 60.6
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 2.1e-108 396.7 364 58.2
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 8.1e-108 394.8 377 59.9
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 1.1e-107 394.4 368 59.5
QL08p065069 Quercus lobata HOM05D004933 ORTHO05D005465 1.8e-107 393.7 326 62.3
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 1.2e-106 391.0 388 56.2
Oeu064000.1 Olea europaea HOM05D004933 ORTHO05D005465 1.5e-106 390.6 371 58.5
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 1.5e-106 390.6 366 59.8
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 4.4e-106 389.0 360 58.9
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 9.8e-106 387.9 360 59.2
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 1.7e-105 387.1 367 58.6
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 9.2e-104 381.3 365 59.5
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 5.1e-102 375.6 362 57.7
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 6.6e-102 375.2 377 58.9
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 3.3e-101 372.9 369 59.3
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 4.3e-101 372.5 364 57.4
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 1.1e-99 367.9 364 57.4
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 1.8e-99 367.1 363 56.7
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 1.2e-95 354.4 370 52.7
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 3.0e-94 349.7 362 53.9
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 6.6e-94 348.6 362 54.1
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 1.1e-93 347.8 380 53.2
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 3.3e-93 346.3 362 54.4
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 5.6e-93 345.5 374 52.4
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 7.3e-93 345.1 362 53.0
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 2.1e-92 343.6 362 53.0
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 4.7e-92 342.4 369 53.4
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 4.7e-92 342.4 362 54.7
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 1.4e-91 340.9 362 53.3
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 1.8e-91 340.5 366 53.0
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 1.8e-91 340.5 362 53.3
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 2.4e-91 340.1 362 52.5
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 2.4e-91 340.1 362 53.0
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 8.9e-91 338.2 366 53.3
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 2.0e-90 337.0 362 52.8
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 9.9e-90 334.7 362 52.2
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 2.9e-89 333.2 366 52.7
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 8.4e-89 331.6 371 51.2
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 1.1e-88 331.3 365 53.2
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 2.1e-87 327.0 365 51.8
CAN.G1229.10 Capsicum annuum HOM05D004933 ORTHO05D005465 3.5e-87 326.2 363 51.0
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 3.5e-87 326.2 362 50.8
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 1.0e-86 324.7 363 51.2
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 1.3e-84 317.8 366 50.3
Nitab4.5_0006356g0010 Nicotiana tabacum HOM05D004933 ORTHO05D005465 1.1e-83 314.7 381 48.3
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 3.4e-82 309.7 368 50.0
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 8.4e-81 305.1 362 50.3
SGA_v2.0_scaffold44G16628 Striga asiatica HOM05D004933 ORTHO05D005465 7.9e-79 298.5 366 49.7
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.1e-75 288.1 334 50.3
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 2.4e-75 287.0 258 62.4
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 4.0e-75 286.2 259 61.0
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 1.2e-71 274.6 369 45.0
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 2.3e-70 270.4 334 48.2
Zm00001eb330720 Zea mays HOM05D004933 ORTHO05D005465 8.7e-70 268.5 364 42.6
BcaC02g12883 Brassica carinata HOM05D004933 ORTHO05D005465 1.9e-56 224.2 294 48.0
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 1.5e-45 188.0 371 34.2
SGA_v2.0_scaffold18G08517 Striga asiatica HOM05D004933 ORTHO05D005465 8.2e-44 182.2 292 41.8
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 1.1e-40 171.8 375 33.3
VMungo0647G0473 Vigna mungo HOM05D004933 ORTHO05D005465 2.8e-36 157.1 76 89.5
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 1.0e-33 148.7 371 30.2
Hma1.2p1_0264F.1_g105960 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.9e-33 147.1 142 60.6
QL08p037214 Quercus lobata HOM05D002263 ORTHO05D005465 6.5e-33 146.0 113 69.9
Mapoly0021s0042 Marchantia polymorpha HOM05D004933 ORTHO05D005465 2.0e-21 107.8 384 26.8
CDE04G3532 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 1.3e-20 105.1 121 52.1
MD07G1235300 Malus domestica HOM05D004933 ORTHO05D005465 1.6e-18 98.2 77 66.2
QL08p003465 Quercus lobata HOM05D002263 ORTHO05D012916 1.7e-17 94.7 73 67.1
SEGI_41607 Sequoiadendron giganteum HOM05D004933 ORTHO05D005465 5.0e-17 93.2 138 41.3
Potri.019G060000 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.8e-14 84.7 46 73.9
Potri.019G060126 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.8e-14 84.7 46 73.9
SMO361G0667 Selaginella moellendorffii HOM05D016509 ORTHO05D005465 8.8e-14 82.4 269 29.7
SEGI_41016 Sequoiadendron giganteum HOM05D004933 ORTHO05D005465 1.8e-11 74.7 82 42.7
SMO361G0619 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 1.7e-09 68.2 225 28.4
Potri.019G060300 Populus trichocarpa HOM05D004933 ORTHO05D005465 6.1e-07 59.7 40 60.0


User provided reference genes

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