Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 1.1e-290 1002.7 520 100.0
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 9.7e-244 846.7 525 83.0
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 4.0e-237 824.7 525 83.0
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.3e-208 729.9 535 72.0
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 3.2e-202 708.8 545 70.5
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.7e-200 703.0 527 73.4
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.1e-199 700.3 527 73.4
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 2.8e-198 695.7 559 68.7
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.1e-197 693.7 544 69.3
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 3.4e-196 688.7 513 72.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 4.4e-196 688.3 510 71.8
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 4.9e-195 684.9 484 73.1
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 6.4e-195 684.5 524 67.4
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 7.1e-194 681.0 515 69.5
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 1.2e-193 680.2 513 71.3
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 6.0e-193 677.9 479 76.2
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.0e-192 677.2 503 71.0
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.3e-192 676.8 489 73.4
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.3e-192 676.8 493 72.2
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 2.3e-192 676.0 526 71.7
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 7.3e-191 671.0 520 67.7
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 2.8e-190 669.1 529 70.5
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 6.2e-190 667.9 511 70.5
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 6.2e-190 667.9 511 70.5
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.1e-189 667.2 497 67.8
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 4.0e-189 665.2 479 73.7
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 6.9e-189 664.5 521 69.3
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 6.9e-189 664.5 479 71.6
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 9.0e-189 664.1 506 70.0
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 1.5e-188 663.3 516 70.3
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 1.3e-187 660.2 498 68.7
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 2.9e-187 659.1 507 66.5
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 8.4e-187 657.5 504 68.3
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 8.4e-187 657.5 488 71.3
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.4e-186 656.8 479 69.9
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 1.9e-186 656.4 475 68.6
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 1.9e-186 656.4 553 64.0
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.4e-186 656.0 523 65.4
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 3.2e-186 655.6 509 66.8
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 4.2e-186 655.2 471 71.3
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 7.1e-186 654.4 509 66.4
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 7.1e-186 654.4 473 70.6
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.2e-185 653.7 509 66.6
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 1.2e-185 653.7 520 66.2
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 4.6e-185 651.7 476 71.4
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 6.0e-185 651.4 494 67.8
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 1.0e-184 650.6 476 71.2
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 2.3e-184 649.4 453 75.9
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 3.9e-184 648.7 474 70.3
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 3.9e-184 648.7 477 70.4
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 3.9e-184 648.7 476 71.0
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 8.7e-184 647.5 473 70.4
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.1e-183 647.1 536 67.7
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 2.5e-183 646.0 510 68.6
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 4.3e-183 645.2 478 70.5
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 2.1e-182 642.9 477 71.5
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 8.1e-182 641.0 445 73.3
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.8e-181 639.8 477 69.2
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 3.1e-181 639.0 489 69.1
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 3.4e-180 635.6 524 66.0
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 1.3e-179 633.6 494 67.0
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 2.2e-179 632.9 502 66.3
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 2.4e-178 629.4 504 66.9
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 2.4e-178 629.4 502 65.5
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 2.4e-178 629.4 502 65.5
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 2.4e-178 629.4 482 67.4
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 3.2e-178 629.0 524 65.5
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 5.4e-178 628.2 487 66.5
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 7.1e-178 627.9 500 65.6
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 9.3e-178 627.5 500 65.6
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 3.0e-176 622.5 500 65.2
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 3.0e-176 622.5 501 65.3
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 8.7e-176 620.9 479 68.1
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.9e-175 619.8 485 68.7
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 4.3e-175 618.6 505 64.4
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 2.1e-174 616.3 487 68.2
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 3.1e-173 612.5 503 65.0
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 3.4e-172 609.0 479 67.4
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 5.8e-172 608.2 480 65.2
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.8e-171 605.5 558 59.7
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 8.4e-171 604.4 475 69.1
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 4.2e-170 602.1 479 66.8
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 4.2e-170 602.1 468 67.3
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 5.5e-170 601.7 472 66.9
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 9.3e-170 600.9 523 62.0
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 9.6e-167 590.9 483 63.8
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 4.8e-166 588.6 532 62.6
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 7.6e-164 581.3 415 70.1
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 8.7e-160 567.8 474 65.6
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 1.5e-156 557.0 434 66.6
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 1.2e-153 547.4 478 61.5
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 3.0e-152 542.7 424 67.0
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.5e-151 540.4 451 63.4
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 4.7e-145 518.8 553 55.5
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 4.1e-141 505.8 538 54.3
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 1.7e-99 367.5 331 59.5
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 2.4e-93 347.1 295 64.4
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 5.2e-88 329.3 460 44.1
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.2e-86 323.9 255 66.3
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 2.8e-81 307.0 167 86.2
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.8e-79 299.3 236 65.7
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 6.4e-78 295.8 244 63.1
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 7.1e-77 292.4 508 39.8
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 6.0e-68 262.7 231 61.9
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.8e-64 251.1 494 36.0
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 6.9e-64 249.2 202 64.9
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 9.9e-63 245.4 397 36.8
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 3.7e-57 226.9 125 81.6
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.5e-55 221.5 262 49.2
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 2.6e-55 220.7 125 82.4
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 5.5e-53 213.0 134 85.8
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 8.7e-51 205.7 148 70.3
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.6e-47 194.1 167 67.7
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 3.8e-46 190.3 172 56.4
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 6.1e-44 183.0 319 37.6
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 1.1e-32 145.6 80 82.5
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 1.2e-28 132.1 108 65.7
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 3.9e-27 127.1 228 39.5
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 5.0e-22 110.2 76 64.5
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 8.2e-17 92.8 83 57.8
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.4e-16 92.0 53 79.2
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 1.7e-14 85.1 113 46.0
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 1.7e-14 85.1 92 47.8
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 7.2e-13 79.7 142 42.3
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 8.0e-12 76.3 103 49.5
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.5e-10 72.0 49 57.1
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 4.4e-10 70.5 75 54.7
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 9.8e-10 69.3 132 42.4
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 4.5e-07 60.5 53 58.5
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 2.2e-06 58.2 32 78.1


User provided reference genes

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