Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 6.2e-174 614.0 304 100.0
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 2.7e-153 545.4 329 84.2
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 4.8e-142 508.1 277 90.6
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 4.1e-141 505.0 310 81.3
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 7.9e-137 490.7 307 80.1
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 2.0e-135 486.1 308 79.9
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 2.0e-135 486.1 308 79.5
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 3.3e-135 485.3 308 79.5
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 1.2e-132 476.9 305 77.4
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 2.0e-132 476.1 307 78.5
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 2.2e-131 472.6 304 77.3
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 1.5e-130 469.9 315 75.6
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 1.5e-130 469.9 301 76.7
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 3.0e-128 462.2 312 73.7
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 3.0e-128 462.2 312 73.7
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 5.2e-128 461.5 300 77.7
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 7.4e-127 457.6 315 72.7
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.7e-126 456.4 308 75.3
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 4.8e-126 454.9 316 74.4
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 4.8e-126 454.9 314 73.9
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 1.2e-124 450.3 323 70.6
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.6e-124 449.9 330 69.4
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 2.0e-124 449.5 331 68.3
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 3.5e-124 448.7 307 74.3
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 4.5e-124 448.4 311 72.3
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 4.5e-124 448.4 307 74.3
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 1.0e-123 447.2 270 78.5
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 2.2e-123 446.0 313 72.2
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.9e-123 445.7 311 72.0
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 6.5e-123 444.5 345 66.7
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 9.4e-122 440.7 314 71.3
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 2.1e-121 439.5 314 71.7
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 8.0e-121 437.6 316 68.7
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.4e-120 436.8 311 69.8
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 4.0e-120 435.3 349 65.9
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 5.2e-120 434.9 322 67.4
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 6.8e-120 434.5 314 71.0
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 8.8e-120 434.1 305 71.1
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 1.2e-119 433.7 311 70.1
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 2.0e-119 433.0 339 66.1
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 2.0e-119 433.0 336 66.4
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 3.4e-119 432.2 313 70.3
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 3.4e-119 432.2 341 67.4
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 3.4e-119 432.2 329 67.8
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 7.5e-119 431.0 316 69.0
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 7.5e-119 431.0 322 67.1
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 7.5e-119 431.0 322 67.1
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 1.3e-118 430.3 331 67.1
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 1.1e-117 427.2 335 66.3
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.4e-117 426.8 326 66.3
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 2.4e-117 426.0 270 75.6
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 3.1e-117 425.6 317 70.0
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 5.3e-117 424.9 323 67.2
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 7.0e-117 424.5 273 75.8
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 9.1e-117 424.1 327 66.7
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 9.1e-117 424.1 340 65.0
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 2.0e-116 422.9 319 68.0
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 2.7e-116 422.5 271 76.0
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 4.5e-116 421.8 332 66.3
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.0e-115 420.6 332 66.9
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 1.7e-115 419.9 327 64.8
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 8.5e-115 417.5 323 66.3
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.1e-114 417.2 324 66.4
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.9e-114 416.4 332 66.3
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 3.2e-114 415.6 332 65.4
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 1.6e-113 413.3 335 64.8
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.1e-113 412.9 305 69.8
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 2.7e-113 412.5 318 65.4
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 6.1e-113 411.4 269 73.2
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 1.0e-112 410.6 279 74.6
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 1.4e-112 410.2 322 66.1
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 1.4e-112 410.2 322 66.1
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 1.4e-112 410.2 322 66.1
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 1.4e-112 410.2 348 62.9
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 5.2e-112 408.3 319 66.5
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 5.2e-112 408.3 319 66.5
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 5.2e-112 408.3 319 66.5
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 1.2e-111 407.1 301 66.4
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 1.5e-111 406.8 274 72.3
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.0e-111 406.4 288 71.9
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 2.7e-108 396.0 286 72.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.0e-107 394.0 299 68.6
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 1.3e-107 393.7 291 69.8
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 3.8e-107 392.1 311 66.6
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 2.5e-106 389.4 309 66.3
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 5.5e-106 388.3 272 71.3
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 7.2e-106 387.9 292 67.5
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.8e-104 383.3 338 61.5
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.8e-104 383.3 314 65.0
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 4.0e-104 382.1 298 63.1
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.9e-104 380.9 347 59.7
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 1.2e-103 380.6 274 67.2
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 1.5e-103 380.2 267 67.0
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 1.4e-101 373.6 314 61.5
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.1e-101 372.1 283 64.0
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 5.4e-101 371.7 312 63.8
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 3.9e-99 365.5 300 64.3
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 8.0e-97 357.8 273 63.0
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 1.4e-96 357.1 273 61.9
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.3e-94 350.5 268 61.9
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 2.9e-94 349.4 287 65.2
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 6.4e-94 348.2 210 80.5
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 1.4e-93 347.1 266 69.5
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 2.4e-93 346.3 225 75.1
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 7.8e-92 341.3 370 52.4
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 1.0e-91 340.9 210 77.1
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 2.3e-91 339.7 264 66.7
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 8.6e-91 337.8 291 64.3
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 3.3e-90 335.9 255 62.0
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 5.8e-87 325.1 311 57.6
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 8.9e-80 301.2 227 61.2
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 2.0e-79 300.1 241 60.2
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 7.1e-77 291.6 241 59.3
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 1.3e-75 287.3 227 60.8
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 1.3e-70 270.8 224 61.2
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 3.0e-67 259.6 224 62.1
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.9e-66 256.9 210 66.2
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 3.3e-66 256.1 167 73.7
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 5.6e-66 255.4 276 47.8
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 8.4e-62 241.5 216 54.6
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 5.3e-56 222.2 232 54.7
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 1.7e-54 217.2 187 55.6
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 4.9e-54 215.7 284 43.0
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 6.2e-49 198.7 183 57.9
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 4.9e-46 189.1 109 84.4
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 3.2e-45 186.4 112 80.4
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 1.8e-43 180.6 100 86.0
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 1.8e-40 170.6 102 85.3
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.1e-40 169.5 188 47.9
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.5e-39 167.5 188 47.3
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-37 161.4 188 45.7
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.2e-37 159.5 187 46.5
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 3.9e-35 152.9 85 83.5
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.3e-33 145.6 184 42.4
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.4e-32 144.4 188 43.1
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 5.3e-32 142.5 165 53.3
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 9.0e-32 141.7 77 85.7
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 4.5e-31 139.4 97 76.3
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.4e-27 127.9 188 38.3
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 2.5e-26 123.6 84 69.0
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.3e-26 122.9 211 33.6
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 9.7e-26 121.7 176 37.5
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.2e-25 120.6 195 37.9
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.8e-24 117.5 188 36.2
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 2.2e-22 110.5 138 45.7
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.6e-20 104.4 188 34.0
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 7.0e-16 89.0 180 30.0
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 8.5e-14 82.0 198 29.8
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 2.6e-10 70.5 57 57.9
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 6.3e-09 65.9 68 52.9
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.1e-08 63.5 107 34.6
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.2e-07 61.6 32 81.2
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 1.3e-06 58.2 61 47.5


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