Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 7.1e-167 590.5 292 100.0
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 3.0e-157 558.5 292 94.2
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.1e-156 556.6 286 95.1
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 4.8e-155 551.2 292 92.5
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-154 548.9 292 91.4
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 9.0e-154 547.0 292 91.1
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.5e-153 546.2 292 91.1
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 1.5e-153 546.2 292 91.1
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 1.5e-153 546.2 292 91.1
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 1.5e-153 546.2 292 91.4
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.0e-153 545.8 289 90.7
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 7.6e-153 543.9 273 97.8
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.7e-152 542.7 292 90.4
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 2.2e-152 542.3 292 89.7
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 2.2e-152 542.3 289 89.3
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.9e-151 539.3 285 90.9
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 1.9e-151 539.3 289 88.9
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 1.9e-151 539.3 292 91.1
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 9.3e-151 537.0 292 88.0
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.6e-150 536.2 285 89.8
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.7e-150 535.4 289 88.6
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 3.5e-150 535.0 296 87.5
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 3.5e-150 535.0 289 89.3
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 4.6e-150 534.6 292 87.3
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 4.6e-150 534.6 285 89.5
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 6.0e-150 534.3 289 88.6
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 1.0e-149 533.5 289 88.2
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 1.3e-149 533.1 289 87.5
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.3e-149 533.1 289 89.3
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 1.3e-149 533.1 290 87.2
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 1.7e-149 532.7 289 87.2
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 2.3e-149 532.3 288 88.9
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.0e-149 531.9 285 89.1
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 3.9e-149 531.6 285 88.8
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 3.9e-149 531.6 289 88.2
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.9e-149 531.6 289 88.2
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 3.9e-149 531.6 286 89.2
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 3.9e-149 531.6 292 89.0
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 5.1e-149 531.2 288 88.9
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 6.6e-149 530.8 291 86.9
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.1e-148 530.0 289 89.6
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.5e-148 529.6 289 88.2
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.5e-148 529.6 289 88.6
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 1.9e-148 529.3 289 88.2
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.5e-148 528.9 289 88.2
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 2.5e-148 528.9 288 88.9
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 3.3e-148 528.5 285 88.4
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 3.3e-148 528.5 292 87.0
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 3.3e-148 528.5 288 88.5
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 3.3e-148 528.5 289 87.5
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 3.3e-148 528.5 288 87.5
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 4.3e-148 528.1 289 87.9
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 7.4e-148 527.3 289 87.5
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 1.3e-147 526.6 289 86.5
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.6e-147 526.2 286 88.5
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.6e-147 526.2 289 87.2
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 2.1e-147 525.8 289 86.5
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 3.6e-147 525.0 286 87.8
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.6e-147 525.0 289 87.9
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 4.8e-147 524.6 292 86.3
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 8.1e-147 523.9 288 87.8
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 8.1e-147 523.9 288 87.5
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 1.1e-146 523.5 289 87.5
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.1e-146 523.5 289 86.2
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.4e-146 523.1 292 86.3
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 1.8e-146 522.7 289 87.2
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 2.4e-146 522.3 292 85.6
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 2.4e-146 522.3 286 86.7
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.1e-146 521.9 292 85.6
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 4.0e-146 521.5 313 82.7
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 5.3e-146 521.2 286 88.1
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 6.9e-146 520.8 289 87.5
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 6.9e-146 520.8 289 86.2
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 9.0e-146 520.4 294 85.7
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 292 86.0
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 292 86.0
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.2e-145 520.0 322 79.5
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 86.8
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 3.4e-145 518.5 286 87.4
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 4.5e-145 518.1 286 87.1
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 4.5e-145 518.1 286 87.1
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 7.6e-145 517.3 289 85.8
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 7.6e-145 517.3 286 85.7
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 1.3e-144 516.5 286 86.7
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 1.7e-144 516.2 289 84.8
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.7e-144 516.2 292 86.3
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 2.2e-144 515.8 292 84.2
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 3.8e-144 515.0 291 86.6
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 6.4e-144 514.2 281 90.7
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 8.4e-144 513.8 271 91.5
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.2e-143 511.5 286 84.3
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.2e-143 511.5 286 84.3
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 4.2e-143 511.5 285 87.0
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 5.5e-143 511.1 275 88.0
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 9.3e-143 510.4 285 86.7
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 9.3e-143 510.4 270 91.5
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.2e-142 510.0 285 86.3
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 1.6e-142 509.6 290 85.9
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 2.1e-142 509.2 289 84.1
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 7.9e-142 507.3 270 91.1
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 8.7e-141 503.8 289 83.7
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 1.9e-140 502.7 290 83.8
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 2.8e-139 498.8 268 89.6
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 2.8e-139 498.8 270 88.9
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.8e-139 498.8 366 69.9
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.2e-139 497.7 286 84.6
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 3.4e-137 491.9 273 85.7
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 7.6e-137 490.7 292 81.5
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.0e-136 490.3 287 84.7
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.8e-136 488.4 288 83.3
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 7.1e-135 484.2 315 76.5
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 9.3e-135 483.8 266 88.7
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 9.3e-135 483.8 298 80.2
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.2e-134 483.4 277 86.3
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.6e-134 483.0 294 81.0
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 1.6e-134 483.0 294 81.0
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 2.1e-134 482.6 271 84.1
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-133 479.9 266 88.0
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 3.9e-133 478.4 286 81.5
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 5.1e-133 478.0 259 89.2
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 2.1e-131 472.6 266 87.6
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 2.4e-130 469.2 255 88.6
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 7.6e-129 464.2 271 80.4
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 5.0e-128 461.5 283 76.7
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.1e-127 460.3 257 86.8
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.5e-127 459.1 318 74.2
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 4.2e-127 458.4 257 86.4
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.2e-126 456.8 289 78.2
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 6.1e-126 454.5 324 71.0
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 1.8e-125 453.0 244 89.3
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 1.8e-125 453.0 286 79.4
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 2.3e-125 452.6 281 75.1
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.7e-125 451.1 254 85.8
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 2.8e-123 445.7 238 90.3
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 1.7e-120 436.4 240 88.8
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 1.4e-119 433.3 288 76.0
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 9.1e-114 414.1 394 58.4
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 1.5e-113 413.3 283 70.0
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 4.5e-113 411.8 220 89.5
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 2.1e-110 402.9 273 74.7
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 7.5e-100 367.9 275 70.5
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 2.8e-99 365.9 398 53.5
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 5.9e-97 358.2 198 87.4
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 7.7e-97 357.8 191 86.4
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 3.7e-91 339.0 272 67.6
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 2.4e-90 336.3 173 91.9
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 3.4e-84 315.8 278 60.1
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 2.5e-79 299.7 234 68.4
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-76 290.0 172 77.3
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.9e-71 273.5 194 73.7
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.5e-68 263.8 265 49.1
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 4.7e-54 215.7 130 83.1
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 4.7e-54 215.7 130 83.1
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 5.2e-53 212.2 194 62.4
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 5.6e-39 165.6 141 64.5
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.9e-31 140.6 129 62.0
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 3.3e-23 113.2 66 75.8
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 5.6e-23 112.5 64 75.0
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.3e-22 111.3 80 65.0
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 6.2e-22 109.0 83 68.7
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 6.2e-22 109.0 83 68.7
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 9.0e-21 105.1 64 78.1
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.8e-16 90.9 51 74.5
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 4.3e-15 86.3 46 91.3
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 4.1e-13 79.7 45 82.2
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 9.0e-13 78.6 162 40.7
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 9.0e-13 78.6 162 40.7
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 4.6e-09 66.2 40 82.5
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 6.3e-06 55.8 40 60.0
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 6.3e-06 55.8 34 76.5


User provided reference genes

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