Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 4.9e-212 741.1 441 100.0
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 6.7e-177 624.4 448 88.6
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 9.1e-142 507.7 443 66.8
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 1.8e-137 493.4 443 66.6
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 2.6e-120 436.4 456 62.5
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 3.4e-104 382.9 442 56.6
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 6.4e-103 378.6 446 56.1
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 8.6e-100 368.2 463 58.1
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 9.5e-99 364.8 458 59.0
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 1.2e-93 347.8 511 56.0
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 5.6e-91 339.0 544 52.6
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 6.2e-90 335.5 544 52.4
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 2.3e-84 317.0 422 50.0
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 1.9e-78 297.4 346 49.7
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 3.8e-71 273.1 348 47.7
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 5.4e-70 269.2 336 48.8
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 3.5e-69 266.5 348 46.8
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 3.7e-66 256.5 338 46.7
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 7.6e-64 248.8 337 47.2
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.0e-63 248.4 334 46.7
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 2.5e-62 243.8 357 43.4
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 2.1e-61 240.7 333 45.9
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 2.7e-61 240.4 340 45.0
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.7e-61 240.4 345 45.8
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 4.6e-61 239.6 354 43.5
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 4.6e-61 239.6 346 44.2
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 1.0e-60 238.4 335 45.4
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.0e-60 238.4 357 44.8
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.8e-60 237.7 335 45.7
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 2.3e-60 237.3 331 45.6
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 5.1e-60 236.1 334 45.5
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 5.1e-60 236.1 348 44.8
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 4.3e-59 233.0 338 45.0
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 1.6e-58 231.1 333 42.3
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 3.7e-58 229.9 393 39.9
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 6.2e-58 229.2 334 42.2
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 1.8e-57 227.6 330 43.3
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 9.0e-57 225.3 406 40.4
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 4.5e-56 223.0 406 40.1
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.3e-55 221.5 378 41.3
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 6.5e-55 219.2 441 38.3
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 1.4e-54 218.0 332 43.4
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 2.5e-54 217.2 331 41.7
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 4.2e-54 216.5 332 43.4
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 5.5e-54 216.1 282 51.4
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 5.5e-54 216.1 400 39.8
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 7.2e-54 215.7 336 41.4
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 1.2e-53 214.9 238 50.8
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 3.5e-53 213.4 442 38.2
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 3.5e-53 213.4 384 39.8
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 3.5e-53 213.4 328 43.0
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 4.6e-53 213.0 324 41.4
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 6.1e-53 212.6 378 40.2
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 2.3e-52 210.7 323 43.0
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 3.9e-52 209.9 323 43.0
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 3.9e-52 209.9 325 43.7
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 1.1e-51 208.4 346 42.2
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 1.1e-51 208.4 401 38.4
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 1.5e-51 208.0 337 39.8
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 2.5e-51 207.2 444 36.5
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 2.5e-51 207.2 399 37.1
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 3.3e-51 206.8 439 37.4
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 5.7e-51 206.1 331 42.0
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 2.8e-50 203.8 339 40.1
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 3.7e-50 203.4 387 39.3
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 4.8e-50 203.0 441 37.0
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 1.1e-49 201.8 330 41.5
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 4.1e-49 199.9 330 41.5
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 4.1e-49 199.9 335 41.2
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 6.9e-49 199.1 329 40.1
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 6.9e-49 199.1 176 55.1
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 1.3e-47 194.9 331 41.1
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 2.9e-47 193.7 381 36.7
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 2.9e-47 193.7 413 36.6
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 5.0e-47 193.0 416 36.1
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 6.5e-47 192.6 419 35.8
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 1.4e-46 191.4 352 39.5
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 7.2e-46 189.1 406 37.4
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 9.4e-46 188.7 344 38.7
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 1.6e-45 188.0 432 34.5
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 1.6e-45 188.0 420 35.5
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 2.7e-45 187.2 326 39.9
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 3.6e-45 186.8 430 35.1
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.0e-44 185.3 332 37.3
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 2.3e-44 184.1 436 35.3
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 3.9e-44 183.3 431 35.0
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 2.0e-43 181.0 407 34.4
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 9.7e-43 178.7 407 34.2
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 1.8e-41 174.5 420 33.6
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 3.1e-41 173.7 415 32.3
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 5.3e-41 172.9 416 32.2
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.5e-40 171.4 264 39.4
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 2.0e-40 171.0 414 32.1
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.6e-40 170.6 333 36.6
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 3.8e-39 166.8 324 38.3
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 3.8e-39 166.8 324 38.3
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 7.2e-38 162.5 260 42.3
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 3.9e-36 156.8 273 39.6
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 3.7e-34 150.2 340 34.1
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 7.0e-33 146.0 302 35.8
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 2.2e-31 141.0 156 48.7
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 2.9e-31 140.6 153 48.4
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 5.5e-30 136.3 268 36.6
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 1.8e-25 121.3 270 33.7
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 3.1e-25 120.6 197 38.1
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 7.7e-24 115.9 174 37.4
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 1.5e-22 111.7 331 29.6
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 3.6e-21 107.1 260 29.6
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 4.7e-21 106.7 331 29.0
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 1.2e-16 92.0 120 47.5
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 6.5e-15 86.3 63 61.9
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.8e-12 78.2 64 59.4
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 3.7e-10 70.5 58 60.3
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 3.7e-10 70.5 58 60.3


User provided reference genes

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