Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 2.1e-71 272.3 141 100.0
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 1.8e-51 206.1 105 99.0
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 1.8e-51 206.1 105 99.0
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 6.9e-51 204.1 105 98.1
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 1.5e-50 203.0 105 96.2
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 1.5e-50 203.0 105 97.1
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 2.0e-50 202.6 105 96.2
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 2.6e-50 202.2 105 96.2
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 2.6e-50 202.2 105 96.2
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 2.6e-50 202.2 105 96.2
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 3.4e-50 201.8 105 96.2
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 5.8e-50 201.1 105 95.2
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 5.8e-50 201.1 105 95.2
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 7.6e-50 200.7 105 95.2
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 9.9e-50 200.3 105 94.3
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 9.9e-50 200.3 104 96.2
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.3e-49 199.9 105 94.3
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 1.3e-49 199.9 105 96.2
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 1.7e-49 199.5 104 95.2
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 1.7e-49 199.5 105 94.3
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 2.2e-49 199.1 104 95.2
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.9e-49 198.7 104 94.2
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 2.9e-49 198.7 104 95.2
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 2.9e-49 198.7 105 93.3
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 3.8e-49 198.4 105 94.3
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 3.8e-49 198.4 105 92.4
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 3.8e-49 198.4 105 94.3
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 4.9e-49 198.0 105 94.3
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 4.9e-49 198.0 105 93.3
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 4.9e-49 198.0 105 93.3
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 4.9e-49 198.0 105 95.2
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 4.9e-49 198.0 104 95.2
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 6.4e-49 197.6 105 92.4
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 8.4e-49 197.2 105 91.4
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 8.4e-49 197.2 105 93.3
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 91.4
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 92.4
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 92.4
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 92.4
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 92.4
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 1.1e-48 196.8 105 92.4
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 1.4e-48 196.4 105 92.4
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 1.4e-48 196.4 105 92.4
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 1.4e-48 196.4 105 90.5
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 1.9e-48 196.1 104 92.3
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 1.9e-48 196.1 105 91.4
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 1.9e-48 196.1 104 93.3
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.4e-48 195.7 105 91.4
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 2.4e-48 195.7 105 92.4
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.4e-48 195.7 105 91.4
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 2.4e-48 195.7 105 92.4
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 3.2e-48 195.3 105 91.4
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 3.2e-48 195.3 105 91.4
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 3.2e-48 195.3 105 92.4
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 4.2e-48 194.9 104 93.3
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 5.5e-48 194.5 105 89.5
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 5.5e-48 194.5 105 92.4
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 9.3e-48 193.7 105 90.5
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 1.2e-47 193.4 105 89.5
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 1.6e-47 193.0 105 91.4
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 2.1e-47 192.6 105 89.5
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 2.7e-47 192.2 105 89.5
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 2.7e-47 192.2 105 88.6
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 1.8e-46 189.5 105 88.6
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 1.8e-46 189.5 103 90.3
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 2.3e-46 189.1 106 87.7
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 3.0e-46 188.7 105 87.6
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 3.0e-46 188.7 105 89.5
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 3.9e-46 188.3 105 86.7
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 1.1e-45 186.8 105 88.6
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 1.1e-45 186.8 104 87.5
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 1.5e-45 186.4 105 87.6
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 2.5e-45 185.7 105 85.7
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 2.5e-45 185.7 104 86.5
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 3.3e-45 185.3 105 83.8
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 3.3e-45 185.3 105 83.8
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 3.3e-45 185.3 105 83.8
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 5.6e-45 184.5 105 85.7
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 9.6e-45 183.7 104 84.6
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.1e-44 182.6 104 83.7
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 2.1e-44 182.6 104 83.7
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 2.8e-44 182.2 104 83.7
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 2.8e-44 182.2 104 83.7
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 3.7e-44 181.8 104 83.7
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 4.8e-44 181.4 104 82.7
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 6.2e-44 181.0 104 83.7
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 6.2e-44 181.0 104 82.7
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 1.4e-43 179.9 105 81.9
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 1.4e-43 179.9 104 82.7
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 1.4e-43 179.9 105 82.9
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 1.4e-43 179.9 105 81.0
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 5.3e-43 177.9 103 79.6
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 3.4e-42 175.3 105 76.2
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 2.2e-41 172.6 105 74.3
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-40 170.2 103 75.7
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 5.5e-40 167.9 103 76.7
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 7.1e-40 167.5 105 73.3
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 9.3e-40 167.2 102 76.5
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 1.2e-39 166.8 104 73.1
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 3.0e-38 162.2 102 74.5
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 6.7e-38 161.0 105 69.5
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 9.6e-37 157.1 104 72.1
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 3.4e-34 148.7 104 72.1
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 9.3e-32 140.6 76 92.1
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 4.2e-24 115.2 59 94.9
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 4.2e-24 115.2 101 61.4
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 2.0e-21 106.3 123 45.5
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 9.7e-21 104.0 87 65.5
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 4.7e-15 85.1 103 41.7
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 4.7e-15 85.1 92 46.7
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 6.7e-14 81.3 46 73.9
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 5.3e-11 71.6 86 43.0


User provided reference genes

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