Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 8.6e-165 583.6 291 100.0
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.4e-151 539.7 291 90.7
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 2.4e-151 538.9 291 90.4
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 5.4e-151 537.7 291 90.0
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 1.6e-150 536.2 291 90.4
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 4.6e-150 534.6 291 88.3
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 4.6e-150 534.6 291 88.3
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 7.8e-150 533.9 289 89.3
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 7.8e-150 533.9 287 90.2
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 1.0e-149 533.5 291 88.0
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 1.7e-149 532.7 291 88.3
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 8.7e-149 530.4 291 89.0
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.5e-148 529.6 290 88.6
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 89.0
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 88.3
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 2.5e-148 528.9 291 88.0
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 3.3e-148 528.5 291 88.7
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 3.3e-148 528.5 288 87.8
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 5.6e-148 527.7 291 87.6
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 7.3e-148 527.3 291 87.6
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 9.6e-148 526.9 288 88.9
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 9.6e-148 526.9 291 88.3
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 88.0
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 89.3
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 87.3
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 87.3
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 88.7
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 6.2e-147 524.2 291 89.3
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 85.9
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 87.6
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 1.1e-146 523.5 291 88.7
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 1.4e-146 523.1 291 87.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.8e-146 522.7 291 87.6
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 5.2e-146 521.2 295 86.4
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 6.9e-146 520.8 291 85.9
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 6.9e-146 520.8 291 87.6
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 6.9e-146 520.8 291 86.6
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 9.0e-146 520.4 291 87.3
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 9.0e-146 520.4 288 88.2
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 9.0e-146 520.4 287 88.2
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 9.0e-146 520.4 291 87.6
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.9
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 87.3
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.9
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.5e-145 519.6 291 87.3
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.5e-145 519.6 287 88.2
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.5e-145 519.6 319 82.8
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.0e-145 519.2 291 86.9
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 88.2
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 2.0e-145 519.2 289 87.2
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 2.6e-145 518.8 288 87.5
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 7.6e-145 517.3 288 87.2
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 7.6e-145 517.3 287 87.1
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 7.6e-145 517.3 287 86.8
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 7.6e-145 517.3 291 85.9
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 9.9e-145 516.9 291 87.3
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.3e-144 516.5 291 86.6
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 1.3e-144 516.5 291 86.3
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 1.7e-144 516.2 292 85.6
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 1.7e-144 516.2 291 86.6
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 2.2e-144 515.8 298 85.2
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 2.2e-144 515.8 291 85.6
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.2e-144 515.8 291 86.3
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 2.9e-144 515.4 291 86.6
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 3.8e-144 515.0 289 86.9
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 3.8e-144 515.0 289 87.2
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 6.4e-144 514.2 291 85.6
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 8.4e-144 513.8 291 86.3
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 86.5
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 1.1e-143 513.5 287 87.5
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.1e-143 513.5 291 86.9
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 84.9
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 84.9
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 7.1e-143 510.8 285 87.4
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 1.2e-142 510.0 312 81.1
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.1e-142 509.2 290 84.8
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.7e-142 508.8 286 86.0
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.6e-142 508.1 287 84.7
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.6e-142 508.1 287 84.7
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 1.0e-141 506.9 290 85.9
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 3.0e-141 505.4 290 85.2
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 3.9e-141 505.0 290 83.8
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 3.9e-141 505.0 289 84.8
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 5.1e-141 504.6 275 88.7
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 6.6e-141 504.2 291 83.8
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.1e-140 503.4 290 85.2
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.5e-140 503.1 295 85.1
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 2.5e-140 502.3 292 85.3
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 4.3e-140 501.5 292 84.9
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 7.3e-140 500.7 290 84.8
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 9.6e-140 500.4 291 85.2
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 1.3e-139 500.0 291 85.6
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 2.8e-139 498.8 291 85.2
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 2.8e-139 498.8 273 89.7
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 3.6e-139 498.4 291 84.9
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.6e-139 498.4 363 72.7
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 4.8e-139 498.0 272 88.2
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 1.5e-137 493.0 296 83.8
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 9.9e-137 490.3 290 84.1
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 1.3e-136 490.0 280 86.8
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.3e-136 490.0 272 88.2
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 3.8e-136 488.4 279 87.1
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 4.9e-136 488.0 272 87.9
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 1.1e-135 486.9 270 88.1
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 1.1e-135 486.9 272 87.9
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.2e-135 485.3 272 87.1
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.6e-134 483.0 312 79.8
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 3.5e-134 481.9 270 85.6
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 4.6e-134 481.5 272 86.8
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 7.9e-134 480.7 273 84.2
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 7.9e-134 480.7 294 82.3
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 7.9e-134 480.7 294 82.3
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 1.0e-133 480.3 285 83.9
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 2.3e-133 479.2 301 80.7
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 3.3e-132 475.3 285 81.4
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 4.3e-132 474.9 293 82.6
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 9.6e-132 473.8 259 90.0
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 2.1e-131 472.6 268 87.3
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 6.2e-131 471.1 291 80.1
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.8e-130 469.5 272 86.0
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 3.1e-130 468.8 294 79.3
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 4.0e-130 468.4 272 85.3
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 3.4e-129 465.3 258 90.3
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.7e-128 463.0 253 87.7
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 4.9e-128 461.5 253 87.0
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 6.4e-128 461.1 291 78.7
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 4.2e-127 458.4 315 75.6
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 3.5e-126 455.3 283 76.7
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 7.9e-126 454.1 271 81.2
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 5.1e-125 451.4 330 70.9
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 1.6e-123 446.4 247 88.7
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 3.7e-123 445.3 284 73.6
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 2.6e-121 439.1 238 89.5
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 1.0e-120 437.2 242 88.8
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.5e-120 434.5 238 89.1
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 3.1e-114 415.6 290 74.1
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 3.4e-113 412.1 288 69.8
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 5.9e-113 411.4 394 60.4
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 9.4e-111 404.1 220 89.1
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 1.7e-107 393.3 275 74.5
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.8e-98 363.2 191 89.0
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.2e-96 356.3 198 86.4
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 3.8e-96 355.5 275 68.7
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.9e-95 353.2 400 52.8
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 5.2e-93 345.1 173 94.2
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 3.2e-87 325.9 271 66.1
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 1.8e-82 310.1 280 60.7
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-76 290.0 172 77.9
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 3.4e-76 289.3 244 65.6
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 1.5e-68 263.8 265 49.4
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 7.5e-68 261.5 194 71.1
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 5.4e-50 202.2 193 60.6
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 4.6e-49 199.1 133 75.9
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 4.6e-49 199.1 133 75.9
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 9.3e-34 148.3 142 58.5
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.3e-32 144.4 131 64.1
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 1.7e-24 117.5 72 72.2
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 5.6e-23 112.5 91 63.7
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 9.6e-23 111.7 66 75.8
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 9.0e-21 105.1 88 61.4
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 9.0e-21 105.1 88 61.4
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 2.9e-19 100.1 64 75.0
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 1.3e-16 91.3 51 76.5
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 3.7e-14 83.2 46 84.8
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 3.8e-11 73.2 90 52.2
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 3.8e-11 73.2 90 52.2
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 1.1e-10 71.6 45 75.6
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 4.6e-09 66.2 39 84.6
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 8.7e-08 62.0 46 65.2
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 6.2e-06 55.8 34 79.4


User provided reference genes

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