Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 2.3e-53 212.2 128 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 9.4e-39 163.7 114 82.5
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 6.1e-38 161.0 112 80.4
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 2.3e-37 159.1 116 87.1
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 2.2e-35 152.5 112 72.3
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 6.3e-35 151.0 108 87.0
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 1.4e-34 149.8 109 78.0
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.4e-34 149.1 112 84.8
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.1e-34 148.7 114 80.7
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.1e-34 148.3 126 74.6
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 5.3e-34 147.9 112 79.5
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 6.9e-34 147.5 112 83.9
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 9.1e-34 147.1 111 84.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 9.1e-34 147.1 109 84.4
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 1.2e-33 146.7 112 76.8
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 2.0e-33 146.0 111 64.9
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.6e-33 145.6 111 83.8
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 5.9e-33 144.4 110 69.1
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 7.7e-33 144.1 113 78.8
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-32 143.3 112 81.2
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.3e-32 143.3 112 83.9
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.3e-32 143.3 109 82.6
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.7e-32 142.9 112 81.2
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.7e-32 142.9 112 80.4
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.2e-32 142.5 112 82.1
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.2e-32 142.5 112 83.0
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 2.2e-32 142.5 112 82.1
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.9e-32 142.1 116 80.2
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 6.5e-32 141.0 116 62.9
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 8.5e-32 140.6 112 83.0
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 8.5e-32 140.6 112 83.0
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.4e-31 139.8 112 82.1
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 1.4e-31 139.8 111 66.7
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.4e-31 139.8 114 78.9
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 1.9e-31 139.4 121 76.0
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 2.5e-31 139.0 111 81.1
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 2.5e-31 139.0 112 66.1
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.5e-31 139.0 112 81.2
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.5e-31 139.0 114 78.9
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 2.5e-31 139.0 111 79.3
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 3.2e-31 138.7 112 67.0
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 5.5e-31 137.9 112 75.0
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.5e-31 137.9 112 64.3
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 9.4e-31 137.1 112 79.5
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 9.4e-31 137.1 112 77.7
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 9.4e-31 137.1 112 78.6
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 9.4e-31 137.1 112 78.6
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.2e-30 136.7 112 80.4
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 1.6e-30 136.3 110 73.6
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 2.1e-30 136.0 113 77.0
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 2.7e-30 135.6 108 62.0
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.4e-29 133.3 112 75.9
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.8e-29 132.9 111 79.3
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.8e-29 132.9 110 78.2
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.8e-29 132.9 112 76.8
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.8e-29 132.9 112 77.7
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.8e-29 132.9 114 77.2
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 2.3e-29 132.5 113 77.0
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 2.3e-29 132.5 112 72.3
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 3.0e-29 132.1 112 78.6
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 6.7e-29 131.0 112 75.9
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 8.8e-29 130.6 114 77.2
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 8.8e-29 130.6 114 77.2
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 8.8e-29 130.6 112 75.0
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.1e-28 130.2 109 65.1
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.1e-28 130.2 109 77.1
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 2.0e-28 129.4 112 76.8
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 2.0e-28 129.4 111 61.3
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.4e-28 128.3 108 76.9
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 5.7e-28 127.9 112 74.1
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 5.7e-28 127.9 113 73.5
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.4e-28 127.5 108 74.1
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 1.3e-27 126.7 112 74.1
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.8e-26 122.9 113 75.2
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 4.1e-26 121.7 116 58.6
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.1e-26 121.7 110 58.2
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 5.9e-25 117.9 113 72.6
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 7.7e-25 117.5 123 65.9
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.7e-24 116.3 118 67.8
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.2e-24 115.9 95 64.2
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 2.2e-24 115.9 111 73.0
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 5.0e-24 114.8 98 64.3
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.9e-23 112.8 111 56.8
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 1.2e-22 110.2 115 63.5
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 2.7e-22 109.0 110 65.5
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.7e-22 109.0 113 48.7
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 3.6e-22 108.6 108 65.7
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 6.1e-22 107.8 113 67.3
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 5.2e-21 104.8 111 65.8
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 5.2e-21 104.8 206 44.7
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.7e-21 104.4 87 71.3
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 1.1e-20 103.6 89 62.9
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 5.7e-20 101.3 88 59.1
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 9.7e-20 100.5 87 62.1
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 1.3e-19 100.1 83 74.7
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.7e-19 99.8 115 60.0
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.7e-19 99.8 113 61.1
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 3.7e-19 98.6 86 76.7
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 6.3e-19 97.8 89 75.3
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 6.3e-19 97.8 89 56.2
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 8.2e-19 97.4 113 50.4
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.1e-18 97.1 84 70.2
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.1e-18 97.1 87 59.8
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 1.4e-18 96.7 116 64.7
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.1e-18 95.1 87 75.9
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 4.5e-17 91.7 88 73.9
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 1.0e-16 90.5 55 78.2
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.0e-16 90.5 132 44.7
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.3e-16 90.1 86 54.7
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 1.5e-15 86.7 116 59.5
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 1.5e-15 86.7 112 61.6
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.9e-15 86.3 117 59.0
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 3.2e-15 85.5 112 60.7
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 4.2e-15 85.1 115 60.0
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 7.2e-15 84.3 73 58.9
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 7.2e-15 84.3 108 56.5
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 9.4e-15 84.0 113 58.4
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 9.4e-15 84.0 115 60.0
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.2e-14 83.6 113 49.6
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 4.7e-14 81.6 115 56.5
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.0e-13 80.5 88 52.3
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.8e-13 79.7 82 70.7
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.8e-13 79.7 84 48.8
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 3.4e-12 75.5 89 44.9
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 4.8e-11 71.6 118 55.1
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.4e-10 70.1 118 55.1
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.8e-10 69.7 103 57.3
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.4e-10 69.3 60 60.0
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 5.4e-10 68.2 87 60.9
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 9.1e-10 67.4 57 61.4
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.7e-09 65.9 64 57.8
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.7e-09 65.9 64 57.8
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 1.0e-08 63.9 78 41.0
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.7e-08 63.2 61 54.1
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 2.2e-08 62.8 82 54.9
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 6.5e-08 61.2 60 80.0
PRCOL_00000741 Prasinoderma coloniale HOM05D005515 ORTHO05D006620 1.2e-06 57.0 93 33.3
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 1.6e-06 56.6 87 59.8
ClCG08G010060 Citrullus lanatus HOM05D005515 ORTHO05D006620 8.0e-06 54.3 107 37.4


User provided reference genes

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