Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 6.9e-69 263.8 132 100.0
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.7e-51 206.1 187 63.1
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.7e-51 206.1 187 63.6
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.7e-51 206.1 187 63.6
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 6.4e-51 204.1 187 63.1
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 2.4e-50 202.2 187 63.1
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 3.2e-50 201.8 184 62.5
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 4.2e-50 201.4 187 62.0
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 7.1e-50 200.7 187 61.5
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.1e-50 200.7 187 62.6
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 9.3e-50 200.3 187 62.6
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 6.0e-49 197.6 144 73.6
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 6.0e-49 197.6 187 61.5
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 7.9e-49 197.2 187 61.5
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 3.0e-48 195.3 187 61.0
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 5.1e-48 194.5 187 59.9
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-47 193.0 187 60.4
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.9e-47 192.6 166 65.1
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.9e-47 192.6 166 65.1
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 9.6e-47 190.3 187 60.4
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 9.6e-47 190.3 123 82.1
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.6e-47 190.3 166 64.5
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 2.1e-46 189.1 187 59.4
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 2.1e-46 189.1 176 63.1
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 2.8e-46 188.7 187 58.8
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 3.7e-46 188.3 187 59.9
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 3.7e-46 188.3 187 59.9
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 3.7e-46 188.3 187 59.9
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 3.7e-46 188.3 187 59.9
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 3.7e-46 188.3 187 59.9
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 6.2e-46 187.6 187 59.9
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.2e-46 187.2 173 61.8
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.1e-45 186.8 133 77.4
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-45 186.4 187 59.4
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 1.8e-45 186.0 187 59.4
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 1.8e-45 186.0 155 70.3
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-45 185.7 187 59.4
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-45 185.7 187 59.4
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 2.4e-45 185.7 187 59.4
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 2.4e-45 185.7 187 59.4
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 9.0e-45 183.7 173 61.3
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.2e-44 183.3 184 59.2
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 8.4e-43 177.2 157 63.7
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.9e-42 176.0 184 56.5
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 6.0e-41 171.0 186 55.4
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.9e-41 170.6 173 57.8
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.9e-41 170.6 173 57.8
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 7.9e-41 170.6 132 71.2
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 2.5e-39 165.6 187 55.1
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 3.3e-39 165.2 187 54.0
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 2.8e-38 162.2 172 58.1
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-37 158.7 129 68.2
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 6.9e-37 157.5 176 55.7
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 7.6e-36 154.1 87 90.8
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.2e-35 152.5 87 89.7
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 5.0e-35 151.4 111 76.6
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 5.0e-35 151.4 87 89.7
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 6.5e-35 151.0 87 87.4
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 6.5e-35 151.0 87 87.4
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 6.5e-35 151.0 87 87.4
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.1e-34 150.2 87 87.4
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.5e-34 149.1 87 88.5
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 9.3e-34 147.1 187 48.7
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.2e-33 146.7 84 86.9
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 1.2e-33 146.7 84 86.9
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 1.6e-33 146.4 85 85.9
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 1.6e-33 146.4 86 86.0
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 1.6e-33 146.4 86 86.0
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 2.1e-33 146.0 87 86.2
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.1e-33 146.0 84 86.9
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 2.7e-33 145.6 111 74.8
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 3.6e-33 145.2 87 85.1
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 6.1e-33 144.4 108 75.0
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.1e-33 144.4 87 87.4
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 7.9e-33 144.1 129 65.1
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 7.9e-33 144.1 160 56.9
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 1.3e-32 143.3 108 75.9
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.8e-32 142.9 87 83.9
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.8e-32 142.9 86 84.9
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.8e-32 142.9 113 69.0
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 5.1e-32 141.4 108 74.1
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 5.1e-32 141.4 113 68.1
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-32 141.0 86 83.7
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-32 141.0 116 69.0
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 1.9e-31 139.4 84 83.3
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 1.9e-31 139.4 84 83.3
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.9e-31 139.4 170 52.9
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 3.3e-31 138.7 84 83.3
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 3.3e-31 138.7 84 83.3
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.3e-31 138.3 110 68.2
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 4.3e-31 138.3 87 82.8
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.3e-30 136.7 112 68.8
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.3e-30 136.7 87 79.3
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 2.2e-30 136.0 84 81.0
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-30 134.8 113 69.0
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-30 134.8 113 69.0
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.3e-30 134.4 82 82.9
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-29 133.7 105 73.3
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.4e-29 132.5 87 79.3
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 3.1e-29 132.1 80 81.2
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 4.1e-29 131.7 84 81.0
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 4.1e-29 131.7 80 81.2
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 3.4e-28 128.6 172 47.1
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 3.4e-28 128.6 84 78.6
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 5.5e-26 121.3 87 72.4
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 5.5e-26 121.3 87 72.4
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 5.5e-26 121.3 87 72.4
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 9.4e-26 120.6 83 75.9
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.1e-25 119.4 115 62.6
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.0e-24 117.1 87 70.1
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 1.4e-24 116.7 87 74.7
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 1.8e-24 116.3 143 49.7
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.8e-24 116.3 187 43.3
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 5.1e-24 114.8 194 38.1
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 6.7e-24 114.4 79 73.4
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 8.2e-22 107.5 133 49.6
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 1.4e-21 106.7 66 86.4
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 2.0e-20 102.8 63 85.7
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 2.6e-20 102.4 188 36.7
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.5e-19 97.8 89 61.8
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.5e-19 97.8 89 61.8
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.5e-19 97.8 89 61.8
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.5e-19 97.8 89 61.8
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.5e-19 97.8 89 61.8
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 1.1e-18 97.1 85 63.5
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 1.1e-18 97.1 64 78.1
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 1.4e-18 96.7 90 61.1
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 4.2e-18 95.1 94 57.4
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.2e-18 95.1 80 65.0
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 9.4e-18 94.0 64 81.2
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 1.6e-17 93.2 187 38.0
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-17 93.2 66 74.2
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-17 93.2 66 74.2
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-17 93.2 66 74.2
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-17 93.2 66 74.2
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.6e-17 93.2 66 74.2
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 4.7e-17 91.7 66 75.8
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 6.1e-17 91.3 59 81.4
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 1.0e-16 90.5 185 34.1
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 2.3e-16 89.4 67 71.6
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 3.9e-16 88.6 63 79.4
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.1e-15 87.0 55 80.0
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.1e-15 87.0 55 80.0
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 1.1e-15 87.0 180 30.0
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 1.5e-15 86.7 55 81.8
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.3e-14 83.6 55 78.2
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 1.7e-14 83.2 76 61.8
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.8e-14 82.4 44 88.6
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-14 81.6 44 88.6
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 4.8e-14 81.6 44 88.6
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 1.1e-13 80.5 53 75.5
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 1.8e-13 79.7 45 88.9
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 2.4e-13 79.3 50 82.0
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 5.3e-13 78.2 94 51.1
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 7.0e-13 77.8 110 48.2
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 1.2e-12 77.0 59 72.9
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 1.6e-12 76.6 44 81.8
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.0e-11 73.9 94 45.7
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 2.9e-11 72.4 44 84.1
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 1.5e-10 70.1 50 78.0
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 3.2e-10 68.9 62 59.7
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 5.5e-10 68.2 118 41.5
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 5.5e-10 68.2 45 80.0
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.2e-09 67.0 51 72.5
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.1e-09 66.2 49 73.5
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 2.7e-09 65.9 174 29.3
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 4.7e-09 65.1 34 88.2
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 4.7e-09 65.1 34 88.2
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 8.0e-09 64.3 36 88.9
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 1.4e-08 63.5 74 52.7
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 5.2e-08 61.6 42 69.0
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 8.8e-08 60.8 110 38.2
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.0e-07 59.7 60 56.7
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 9.7e-07 57.4 37 75.7


User provided reference genes

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