Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023054001 Vitis vinifera HOM05D003688 ORTHO05D004338 1.3e-87 326.2 158 100.0
GSVIVG01034167001 Vitis vinifera HOM05D003688 ORTHO05D004338 1.1e-33 147.1 165 53.3
CSS0020509 Camellia sinensis var. sinensis HOM05D003688 ORTHO05D004338 2.1e-32 142.9 79 81.0
Dinv35601 Davidia involucrata HOM05D003688 ORTHO05D004338 5.2e-31 138.3 81 76.5
Prupe.6G255500 Prunus persica HOM05D003688 ORTHO05D004338 6.8e-31 137.9 104 65.4
Aqoxy2G02133 Aquilegia oxysepala HOM05D003688 ORTHO05D004338 2.0e-30 136.3 80 75.0
Oeu033326.1 Olea europaea HOM05D003688 ORTHO05D004338 2.0e-30 136.3 98 65.3
Actinidia11259 Actinidia chinensis HOM05D003688 ORTHO05D004338 2.6e-30 136.0 77 77.9
Sabra06G0065100 Salix brachista HOM05D003688 ORTHO05D004338 3.4e-30 135.6 82 75.6
Hma1.2p1_1899F.1_g306950 Hydrangea macrophylla HOM05D003688 ORTHO05D004338 7.5e-30 134.4 80 76.2
Potri.006G085700 Populus trichocarpa HOM05D003688 ORTHO05D004338 7.5e-30 134.4 82 74.4
Lsat_1_v5_gn_8_81981 Lactuca sativa HOM05D003688 ORTHO05D004338 9.8e-30 134.0 82 70.7
CAN.G324.6 Capsicum annuum HOM05D003688 ORTHO05D004338 1.3e-29 133.7 84 70.2
DCAR_009228 Daucus carota HOM05D003688 ORTHO05D004338 2.2e-29 132.9 83 71.1
Manes.09G091838 Manihot esculenta HOM05D003688 ORTHO05D004338 2.2e-29 132.9 80 75.0
SalBow4G0433 Salvia bowleyana HOM05D003688 ORTHO05D004338 3.7e-29 132.1 82 73.2
Migut.L01946 Erythranthe guttata HOM05D003688 ORTHO05D004338 4.9e-29 131.7 88 62.5
Atru.chr8.1978 Acer truncatum HOM05D003688 ORTHO05D004338 6.4e-29 131.3 82 70.7
Rhsim05G0193000 Rhododendron simsii HOM05D003688 ORTHO05D004338 6.4e-29 131.3 82 70.7
Solyc10g084760.3 Solanum lycopersicum HOM05D003688 ORTHO05D004338 6.4e-29 131.3 84 69.0
Sopen10g034210 Solanum pennellii HOM05D003688 ORTHO05D004338 6.4e-29 131.3 84 69.0
TAR623G0018 Trochodendron aralioides HOM05D003688 ORTHO05D004338 6.4e-29 131.3 80 72.5
Oeu036137.1 Olea europaea HOM05D003688 ORTHO05D004338 1.1e-28 130.6 79 74.7
Ciclev10013610m.g Citrus clementina HOM05D003688 ORTHO05D004338 1.4e-28 130.2 82 68.3
Nitab4.5_0006677g0030 Nicotiana tabacum HOM05D003688 ORTHO05D004338 1.4e-28 130.2 82 70.7
MSTRG.10258 Avicennia marina HOM05D003688 ORTHO05D004338 1.8e-28 129.8 100 60.0
Cpa.g.sc228.13 Carica papaya HOM05D003688 ORTHO05D004338 1.8e-28 129.8 82 70.7
Cfa017377 Carpinus fangiana HOM05D003688 ORTHO05D004338 1.8e-28 129.8 81 70.4
ClCG10G021160 Citrullus lanatus HOM05D003688 ORTHO05D004338 1.8e-28 129.8 82 69.5
vmacro20159 Vaccinium macrocarpon HOM05D003688 ORTHO05D004338 1.8e-28 129.8 82 69.5
Cc06_g02620 Coffea canephora HOM05D003688 ORTHO05D004338 2.4e-28 129.4 81 70.4
Nitab4.5_0003845g0020 Nicotiana tabacum HOM05D003688 ORTHO05D004338 2.4e-28 129.4 82 70.7
RcHm_v2.0_Chr3g0466531 Rosa chinensis HOM05D003688 ORTHO05D004338 2.4e-28 129.4 80 71.2
Sed0022373 Sechium edule HOM05D003688 ORTHO05D004338 2.4e-28 129.4 82 70.7
Sopen09g005560 Solanum pennellii HOM05D003688 ORTHO05D004338 2.4e-28 129.4 82 73.2
Peaxi162Scf00094g00138 Petunia axillaris HOM05D003688 ORTHO05D004338 3.2e-28 129.0 82 69.5
Thecc.05G039500 Theobroma cacao HOM05D003688 ORTHO05D004338 3.2e-28 129.0 83 69.9
CiPaw.10G145700 Carya illinoinensis HOM05D003688 ORTHO05D004338 4.1e-28 128.6 80 72.5
MELO3C009256.2 Cucumis melo HOM05D003688 ORTHO05D004338 4.1e-28 128.6 82 68.3
CsaV3_3G034880 Cucumis sativus L. HOM05D003688 ORTHO05D004338 4.1e-28 128.6 82 68.3
SGA_v2.0_scaffold35G14236 Striga asiatica HOM05D003688 ORTHO05D004338 5.4e-28 128.3 80 70.0
SGA_v2.0_scaffold94G28599 Striga asiatica HOM05D003688 ORTHO05D004338 5.4e-28 128.3 80 71.2
HanXRQChr04g0125101 Helianthus annuus HOM05D003688 ORTHO05D004338 7.0e-28 127.9 81 69.1
EL10Ac9g22598 Beta vulgaris HOM05D003688 ORTHO05D004338 9.2e-28 127.5 82 69.5
CANSAT35G0056 Cannabis sativa HOM05D003688 ORTHO05D004338 1.6e-27 126.7 80 72.5
Haze_20793 Corylus avellana HOM05D003688 ORTHO05D004338 1.6e-27 126.7 80 68.8
Nn2g11106 Nelumbo nucifera HOM05D003688 ORTHO05D004338 1.6e-27 126.7 77 72.7
Solyc09g010830.4 Solanum lycopersicum HOM05D003688 ORTHO05D004338 1.6e-27 126.7 82 72.0
Duzib106G0690 Durio zibethinus HOM05D003688 ORTHO05D004338 3.5e-27 125.6 83 68.7
Duzib128G0151 Durio zibethinus HOM05D003688 ORTHO05D004338 3.5e-27 125.6 83 68.7
Eucgr.A01266 Eucalyptus grandis HOM05D003688 ORTHO05D004338 3.5e-27 125.6 81 67.9
Gohir.A09G155900 Gossypium hirsutum HOM05D003688 ORTHO05D004338 3.5e-27 125.6 83 67.5
MD12G1142100 Malus domestica HOM05D003688 ORTHO05D004338 3.5e-27 125.6 83 68.7
ECA236G0128 Erigeron canadensis HOM05D003688 ORTHO05D004338 5.9e-27 124.8 81 70.4
QL07p048346 Quercus lobata HOM05D003688 ORTHO05D004338 5.9e-27 124.8 82 68.3
TWI77G0691 Tripterygium wilfordii HOM05D003688 ORTHO05D004338 5.9e-27 124.8 94 59.6
Sc20g0004890 Simmondsia chinensis HOM05D003688 ORTHO05D004338 7.8e-27 124.4 79 70.9
TAR369G0630 Trochodendron aralioides HOM05D003688 ORTHO05D004338 7.8e-27 124.4 91 61.5
TWI74G1144 Tripterygium wilfordii HOM05D003688 ORTHO05D004338 1.0e-26 124.0 81 69.1
MBI14_g20100_MAGBIO Magnolia biondii HOM05D003688 ORTHO05D004338 2.3e-26 122.9 80 68.8
Gohir.A13G093100 Gossypium hirsutum HOM05D003688 ORTHO05D004338 3.0e-26 122.5 83 65.1
FvH4_6g13660 Fragaria vesca HOM05D003688 ORTHO05D004338 3.9e-26 122.1 80 68.8
FAN02G2694 Fragaria x ananassa HOM05D003688 ORTHO05D004338 3.9e-26 122.1 80 68.8
FAN05G2232 Fragaria x ananassa HOM05D003688 ORTHO05D004338 3.9e-26 122.1 80 68.8
FAN14G0142 Fragaria x ananassa HOM05D003688 ORTHO05D004338 3.9e-26 122.1 80 68.8
Lj3C967G6 Lonicera japonica HOM05D003688 ORTHO05D004338 3.9e-26 122.1 82 67.1
Os01g0148000 Oryza sativa ssp. japonica HOM05D003688 ORTHO05D004338 3.9e-26 122.1 76 68.4
Thhalv10012411m.g Eutrema salsugineum HOM05D003688 ORTHO05D004338 5.0e-26 121.7 82 65.9
CARHR211070 Cardamine hirsuta HOM05D003688 ORTHO05D004338 6.6e-26 121.3 82 67.1
AUR62029194 Chenopodium quinoa HOM05D003688 ORTHO05D004338 8.6e-26 120.9 82 65.9
PGR004G0645 Punica granatum HOM05D003688 ORTHO05D004338 8.6e-26 120.9 82 63.4
Sp6g40140 Schrenkiella parvula HOM05D003688 ORTHO05D004338 8.6e-26 120.9 82 65.9
THA.LOC104816269 Tarenaya hassleriana HOM05D003688 ORTHO05D004338 8.6e-26 120.9 82 65.9
PSO339G2612 Papaver somniferum HOM05D003688 ORTHO05D004338 1.1e-25 120.6 90 62.2
Carub.0006s0114 Capsella rubella HOM05D003688 ORTHO05D004338 1.5e-25 120.2 82 65.9
AL6G11560 Arabidopsis lyrata HOM05D003688 ORTHO05D004338 1.9e-25 119.8 82 65.9
Lalb_Chr03g0042261 Lupinus albus HOM05D003688 ORTHO05D004338 1.9e-25 119.8 81 64.2
MD04G1129300 Malus domestica HOM05D003688 ORTHO05D004338 1.9e-25 119.8 83 63.9
PSO151G0112 Papaver somniferum HOM05D003688 ORTHO05D004338 1.9e-25 119.8 90 62.2
arahy.Tifrunner.gnm1.ann1.N5BDHI Arachis hypogaea HOM05D003688 ORTHO05D004338 3.3e-25 119.0 81 67.9
arahy.Tifrunner.gnm1.ann1.VY3GX3 Arachis hypogaea HOM05D003688 ORTHO05D004338 3.3e-25 119.0 81 67.9
Gohir.D09G151400 Gossypium hirsutum HOM05D003688 ORTHO05D004338 3.3e-25 119.0 83 65.1
Gorai.006G172700 Gossypium raimondii HOM05D003688 ORTHO05D004338 3.3e-25 119.0 83 65.1
Peaxi162Scf00165g01216 Petunia axillaris HOM05D003688 ORTHO05D004338 3.3e-25 119.0 82 65.9
FAN09G1807 Fragaria x ananassa HOM05D003688 ORTHO05D004338 4.3e-25 118.6 105 58.1
Gohir.D13G098600 Gossypium hirsutum HOM05D003688 ORTHO05D004338 4.3e-25 118.6 83 62.7
Gorai.001G249500 Gossypium raimondii HOM05D003688 ORTHO05D004338 4.3e-25 118.6 83 62.7
HanXRQChr06g0179281 Helianthus annuus HOM05D003688 ORTHO05D004338 4.3e-25 118.6 81 66.7
Aa31LG1G22450 Aethionema arabicum HOM05D003688 ORTHO05D004338 5.6e-25 118.2 88 62.5
AUR62014948 Chenopodium quinoa HOM05D003688 ORTHO05D004338 5.6e-25 118.2 82 64.6
BcaNung02121 Brassica carinata HOM05D003688 ORTHO05D004338 1.6e-24 116.7 82 63.4
C09p74230 Brassica napus HOM05D003688 ORTHO05D004338 1.6e-24 116.7 82 63.4
Sed0016820 Sechium edule HOM05D003688 ORTHO05D004338 1.6e-24 116.7 82 63.4
HanXRQChr06g0177081 Helianthus annuus HOM05D003688 ORTHO05D004338 2.8e-24 115.9 80 65.0
Glyma.07G132300 Glycine max HOM05D003688 ORTHO05D004338 3.6e-24 115.5 79 68.4
Lalb_Chr01g0022521 Lupinus albus HOM05D003688 ORTHO05D004338 3.6e-24 115.5 81 63.0
A10p33320 Brassica napus HOM05D003688 ORTHO05D004338 6.2e-24 114.8 82 62.2
BraA10t45363Z Brassica rapa HOM05D003688 ORTHO05D004338 6.2e-24 114.8 82 62.2
Gohir.A01G222300 Gossypium hirsutum HOM05D003688 ORTHO05D004338 6.2e-24 114.8 83 61.4
C02p00430 Brassica napus HOM05D003688 ORTHO05D004338 8.0e-24 114.4 82 64.6
BolC2t06043H Brassica oleracea HOM05D003688 ORTHO05D004338 8.0e-24 114.4 82 63.4
BraA02t04715Z Brassica rapa HOM05D003688 ORTHO05D004338 8.0e-24 114.4 82 64.6
Glyma.18G181200 Glycine max HOM05D003688 ORTHO05D004338 1.0e-23 114.0 79 68.4
unitig_0.g702 Utricularia gibba HOM05D003688 ORTHO05D004338 1.0e-23 114.0 76 65.8
Ca_07551_v3 Cicer arietinum L. HOM05D003688 ORTHO05D004338 1.8e-23 113.2 81 63.0
Lj1g0008992 Lotus japonicus HOM05D003688 ORTHO05D004338 1.8e-23 113.2 81 61.7
BcaC06g31982 Brassica carinata HOM05D003688 ORTHO05D004338 2.3e-23 112.8 82 63.4
CDE04G0526 Ceratophyllum demersum HOM05D003688 ORTHO05D004338 4.0e-23 112.1 77 64.9
AT5G02310 Arabidopsis thaliana HOM05D003688 ORTHO05D004338 6.8e-23 111.3 81 60.5
HPP92_012595 Vanilla planifolia HOM05D003688 ORTHO05D004338 6.8e-23 111.3 77 59.7
Gohir.D01G211800 Gossypium hirsutum HOM05D003688 ORTHO05D004338 8.9e-23 110.9 83 60.2
Gorai.002G257600 Gossypium raimondii HOM05D003688 ORTHO05D004338 8.9e-23 110.9 83 60.2
ATR0559G162 Amborella trichopoda HOM05D003688 ORTHO05D004338 1.2e-22 110.5 82 58.5
Phvul.008G106950 Phaseolus vulgaris HOM05D003688 ORTHO05D004338 1.5e-22 110.2 79 64.6
Psat3g140000 Pisum sativum HOM05D003688 ORTHO05D004338 2.0e-22 109.8 76 65.8
TPR.G23256 Trifolium pratense HOM05D003688 ORTHO05D004338 2.0e-22 109.8 77 63.6
Haze_03516 Corylus avellana HOM05D003688 ORTHO05D004338 3.4e-22 109.0 73 64.4
Medtr7g061540 Medicago truncatula HOM05D003688 ORTHO05D004338 7.5e-22 107.8 65 72.3
BcaB01g06223 Brassica carinata HOM05D003688 ORTHO05D004338 1.7e-21 106.7 82 57.3
A03p00630 Brassica napus HOM05D003688 ORTHO05D004338 2.9e-21 105.9 82 57.3
BraA03t09453Z Brassica rapa HOM05D003688 ORTHO05D004338 2.9e-21 105.9 82 57.3
VMungo1383G2756 Vigna mungo HOM05D003688 ORTHO05D004338 2.9e-21 105.9 79 62.0
SEGI_36024 Sequoiadendron giganteum HOM05D003688 ORTHO05D004338 3.7e-21 105.5 82 57.3
BcaB01g06158 Brassica carinata HOM05D003688 ORTHO05D004338 1.1e-20 104.0 82 56.1
C03p00900 Brassica napus HOM05D003688 ORTHO05D004338 1.1e-20 104.0 82 56.1
BolC3t12653H Brassica oleracea HOM05D003688 ORTHO05D004338 1.1e-20 104.0 82 56.1
AUR62029189 Chenopodium quinoa HOM05D003688 ORTHO05D004338 1.6e-19 100.1 77 55.8
AUR62014950 Chenopodium quinoa HOM05D003688 ORTHO05D004338 8.6e-18 94.4 77 51.9
AUR62029193 Chenopodium quinoa HOM05D003688 ORTHO05D004338 1.1e-17 94.0 75 52.0
Mapoly0123s0014 Marchantia polymorpha HOM05D003688 ORTHO05D004338 9.5e-17 90.9 76 53.9
Pp3c10_20380 Physcomitrium patens HOM05D003688 ORTHO05D004338 9.5e-17 90.9 69 58.0
SMO361G0120 Selaginella moellendorffii HOM05D003688 ORTHO05D004338 1.2e-16 90.5 76 52.6
SMO361G0552 Selaginella moellendorffii HOM05D003688 ORTHO05D004338 1.2e-16 90.5 76 52.6
Pp3c3_24510 Physcomitrium patens HOM05D003688 ORTHO05D004338 1.1e-15 87.4 69 56.5
Pp3c3_37220 Physcomitrium patens HOM05D003688 ORTHO05D004338 1.4e-15 87.0 82 48.8
CBR_g34200 Chara braunii HOM05D003688 ORTHO05D004338 1.5e-14 83.6 69 55.1
Pp3c8_2930 Physcomitrium patens HOM05D003688 ORTHO05D004338 4.4e-14 82.0 71 47.9
Pp3c8_2940 Physcomitrium patens HOM05D003688 ORTHO05D004338 4.4e-14 82.0 71 47.9
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 1.1e-12 77.4 40 80.0
Pp3c17_2850 Physcomitrium patens HOM05D003688 ORTHO05D004338 2.5e-09 66.2 71 43.7
PRCOL_00001936 Prasinoderma coloniale HOM05D003688 ORTHO05D004338 5.6e-09 65.1 95 38.9
Pp3c15_3560 Physcomitrium patens HOM05D003688 ORTHO05D004338 1.4e-07 60.5 92 40.2
Mapoly0028s0055 Marchantia polymorpha HOM05D003688 ORTHO05D004338 4.0e-07 58.9 80 38.8


User provided reference genes

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