Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 2.1e-251 872.5 660 100.0
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 7.6e-185 651.4 660 80.5
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 2.0e-169 600.1 661 79.1
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 5.9e-169 598.6 655 78.6
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 1.4e-167 594.0 642 78.0
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 4.8e-163 578.9 656 77.1
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 4.5e-161 572.4 592 81.4
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 1.0e-160 571.2 605 80.3
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 1.3e-160 570.9 629 80.4
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 5.0e-160 568.9 652 77.3
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 8.5e-160 568.2 601 79.2
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 7.2e-159 565.1 632 80.2
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 2.6e-156 556.6 613 77.7
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 5.7e-156 555.4 668 75.6
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 4.8e-155 552.4 660 75.6
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 1.1e-154 551.2 661 73.4
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 7.0e-154 548.5 660 73.0
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 2.0e-153 547.0 563 86.0
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 2.6e-153 546.6 666 75.4
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 7.2e-151 538.5 762 53.3
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 6.1e-150 535.4 661 75.8
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 1.0e-144 518.1 637 73.9
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 1.7e-144 517.3 655 73.3
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.5e-143 514.2 659 74.5
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 4.2e-143 512.7 658 70.5
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 7.2e-143 511.9 640 73.4
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 1.2e-142 511.1 646 71.2
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 8.0e-142 508.4 596 71.3
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 8.0e-142 508.4 662 72.2
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.0e-141 508.1 640 72.8
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 1.8e-141 507.3 638 71.8
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 4.0e-141 506.1 596 72.8
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 8.8e-141 505.0 635 68.5
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 1.5e-140 504.2 660 71.7
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.5e-140 504.2 660 66.8
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 2.6e-140 503.4 646 70.3
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 5.7e-140 502.3 657 71.2
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 7.5e-140 501.9 636 70.0
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 7.5e-140 501.9 662 71.0
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 9.8e-140 501.5 657 72.5
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 1.4e-138 497.7 598 70.4
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 7.0e-138 495.4 645 70.2
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 2.0e-137 493.8 636 69.8
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 3.5e-137 493.0 628 71.7
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.0e-136 491.5 637 71.7
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 1.3e-136 491.1 608 73.2
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 3.3e-135 486.5 532 81.0
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 5.5e-135 485.7 650 72.6
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.0e-133 481.5 599 76.0
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 3.0e-133 479.9 534 80.7
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 4.9e-131 472.6 681 70.3
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 1.8e-130 470.7 624 70.7
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 5.4e-130 469.2 656 72.1
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 1.6e-129 467.6 653 70.9
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 4.5e-129 466.1 664 61.1
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 2.5e-127 460.3 630 70.5
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 2.6e-124 450.3 570 76.8
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 5.6e-119 432.6 532 80.1
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 1.8e-117 427.6 533 76.0
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 5.2e-117 426.0 603 71.0
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 4.4e-116 422.9 574 71.4
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.3e-115 421.4 588 68.2
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 1.7e-115 421.0 580 75.5
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 2.2e-115 420.6 580 75.5
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 1.1e-114 418.3 654 61.2
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 5.0e-112 409.5 587 71.2
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 1.5e-108 397.9 580 72.2
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 1.6e-102 377.9 592 69.6
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 1.5e-100 371.3 622 44.9
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 6.4e-99 365.9 215 82.8
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 6.4e-99 365.9 215 83.3
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 9.2e-98 362.1 584 63.5
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 3.9e-96 356.7 598 66.1
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 2.5e-95 354.0 706 61.3
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 6.2e-94 349.4 584 63.0
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 6.2e-94 349.4 214 79.4
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 7.1e-90 335.9 622 65.1
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 7.1e-90 335.9 215 74.0
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 1.7e-88 331.3 580 66.0
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 1.8e-85 321.2 647 61.5
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 1.5e-84 318.2 219 71.7
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 4.2e-82 310.1 214 72.9
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.3e-80 304.3 186 79.0
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 3.0e-80 303.9 529 72.0
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 3.2e-74 283.9 252 69.4
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 3.1e-69 267.3 484 72.7
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 2.9e-67 260.8 162 77.8
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 6.3e-62 243.0 263 62.4
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 7.4e-55 219.5 245 46.1
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.7e-54 218.4 265 57.7
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 2.0e-44 184.9 152 76.3
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 3.5e-44 184.1 291 50.2
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 9.7e-39 166.0 124 68.5
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.7e-38 165.2 155 69.7
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 1.8e-37 161.8 110 68.2
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 6.3e-30 136.7 171 52.6
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 2.3e-24 118.2 116 69.8
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 1.3e-19 102.4 66 72.7
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 1.0e-16 92.8 128 35.2
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 1.8e-16 92.0 48 85.4
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 1.6e-09 68.9 72 44.4
CDE06G1477 Ceratophyllum demersum HOM05D006354 ORTHO05D007773 1.0e-08 66.2 170 24.1
Mapoly0063s0054 Marchantia polymorpha HOM05D003056 ORTHO05D003422 6.8e-08 63.5 179 22.9
Glyma.15G038300 Glycine max HOM05D006354 ORTHO05D007773 3.4e-07 61.2 170 27.1
Cpa.g.c31488 Carica papaya HOM05D007322 ORTHO05D009029 5.8e-07 60.5 101 32.7
Sabra17G0065200 Salix brachista HOM05D007322 ORTHO05D009029 5.8e-07 60.5 120 34.2
Phvul.L005443 Phaseolus vulgaris HOM05D006354 ORTHO05D007773 7.5e-07 60.1 169 25.4
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 7.5e-07 60.1 121 27.3
Ca_01327_v3 Cicer arietinum L. HOM05D006354 ORTHO05D007773 1.3e-06 59.3 170 24.7
DCAR_020128 Daucus carota HOM05D003056 ORTHO05D003422 1.3e-06 59.3 185 20.5
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 1.3e-06 59.3 100 29.0
Carub.0001s0691 Capsella rubella HOM05D006354 ORTHO05D007773 1.7e-06 58.9 172 24.4
Prupe.6G077700 Prunus persica HOM05D006354 ORTHO05D007773 1.7e-06 58.9 170 24.7
ATR0180G025 Amborella trichopoda HOM05D042338 ORTHO05D031092 2.2e-06 58.5 107 31.8
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 2.9e-06 58.2 185 21.1
Sabra07G0055900 Salix brachista HOM05D000293 ORTHO05D009029 2.9e-06 58.2 50 54.0
Pp3c22_3230 Physcomitrium patens HOM05D003056 ORTHO05D003422 4.9e-06 57.4 129 24.8
Lalb_Chr17g0347271 Lupinus albus HOM05D006354 ORTHO05D007773 6.4e-06 57.0 169 24.3
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 6.4e-06 57.0 167 25.1
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 8.3e-06 56.6 182 20.3
Psat5g284560 Pisum sativum HOM05D006354 ORTHO05D007773 8.3e-06 56.6 170 24.1


User provided reference genes

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