Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017739001 Vitis vinifera HOM05D000319 ORTHO05D000903 7.3e-29 129.8 62 100.0
Duzib052G0656 Durio zibethinus HOM05D000319 ORTHO05D000903 2.0e-10 68.6 46 73.9
Gorai.005G059400 Gossypium raimondii HOM05D000319 ORTHO05D000903 9.8e-10 66.2 54 59.3
COL.COLO4_04603 Corchorus olitorius HOM05D000319 ORTHO05D000903 1.3e-09 65.9 47 68.1
Dinv38300 Davidia involucrata HOM05D000319 ORTHO05D000903 2.9e-09 64.7 52 61.5
Gohir.D02G053800 Gossypium hirsutum HOM05D000319 ORTHO05D000903 3.7e-09 64.3 50 62.0
Thecc.04G282600 Theobroma cacao HOM05D000319 ORTHO05D000903 4.9e-09 63.9 47 63.8
Gohir.A02G048500 Gossypium hirsutum HOM05D000319 ORTHO05D000903 1.1e-08 62.8 54 57.4
Duzib151G0607 Durio zibethinus HOM05D000319 ORTHO05D000903 1.2e-07 59.3 50 60.0
SGA_v2.0_scaffold86G26892 Striga asiatica HOM05D000319 ORTHO05D000903 3.5e-07 57.8 47 57.4
Actinidia00039 Actinidia chinensis HOM05D000319 ORTHO05D000903 6.0e-07 57.0 50 56.0
Actinidia00040 Actinidia chinensis HOM05D000319 ORTHO05D000903 6.0e-07 57.0 47 57.4
Dinv44395 Davidia involucrata HOM05D000319 ORTHO05D000903 6.0e-07 57.0 47 57.4
Aqoxy2G03040 Aquilegia oxysepala HOM05D000319 ORTHO05D000903 7.8e-07 56.6 47 55.3
Rhsim02G0011800 Rhododendron simsii HOM05D000319 ORTHO05D000903 7.8e-07 56.6 47 57.4
Sed0010368 Sechium edule HOM05D000319 ORTHO05D000903 7.8e-07 56.6 47 57.4
CSS0022272 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
ClCG06G005250 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
MELO3C021345.2 Cucumis melo HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
CsaV3_6G017300 Cucumis sativus L. HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Dinv38301 Davidia involucrata HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Migut.G00178 Erythranthe guttata HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
MD16G1171700 Malus domestica HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Potri.008G217300 Populus trichocarpa HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Sabra08G0154600 Salix brachista HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Sed0015748 Sechium edule HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Sed0016240 Sechium edule HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Sc19g0005080 Simmondsia chinensis HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Solyc01g067100.4 Solanum lycopersicum HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Sopen01g028890 Solanum pennellii HOM05D000319 ORTHO05D000903 1.0e-06 56.2 47 57.4
Cfa015371 Carpinus fangiana HOM05D000319 ORTHO05D000903 1.3e-06 55.8 46 58.7
Sed0015196 Sechium edule HOM05D000319 ORTHO05D000903 1.3e-06 55.8 47 57.4
Solyc01g067210.4 Solanum lycopersicum HOM05D000319 ORTHO05D010858 1.3e-06 55.8 47 57.4
Sopen01g028980 Solanum pennellii HOM05D000319 ORTHO05D000903 1.3e-06 55.8 47 57.4
MSTRG.3928 Avicennia marina HOM05D000319 ORTHO05D000903 1.7e-06 55.5 47 55.3
ECA246G2082 Erigeron canadensis HOM05D000319 ORTHO05D000903 1.7e-06 55.5 47 55.3
SalBow2G1315 Salvia bowleyana HOM05D000319 ORTHO05D000903 1.7e-06 55.5 47 55.3
CANSAT78G1438 Cannabis sativa HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 55.3
Eucgr.H03886 Eucalyptus grandis HOM05D000319 ORTHO05D000903 2.3e-06 55.1 46 58.7
HanXRQChr13g0409831 Helianthus annuus HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 57.4
Lj6C673G12 Lonicera japonica HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 59.6
Oeu021106.1 Olea europaea HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 55.3
Oeu021107.1 Olea europaea HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 55.3
Rhsim02G0010000 Rhododendron simsii HOM05D000319 ORTHO05D000903 2.3e-06 55.1 61 42.6
SGA_v2.0_scaffold57G20224 Striga asiatica HOM05D000319 ORTHO05D000903 2.3e-06 55.1 47 55.3
CAN.G556.9 Capsicum annuum HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
CiPaw.01G150100 Carya illinoinensis HOM05D000319 ORTHO05D000903 3.0e-06 54.7 46 56.5
CiPaw.02G084200 Carya illinoinensis HOM05D000319 ORTHO05D000903 3.0e-06 54.7 46 56.5
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 55.3
Ciclev10019010m.g Citrus clementina HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
Migut.N00104 Erythranthe guttata HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
Eucgr.H03894 Eucalyptus grandis HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
Lsat_1_v5_gn_5_49221 Lactuca sativa HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
MD13G1170300 Malus domestica HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 57.4
Nn3g21390 Nelumbo nucifera HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 55.3
QL06p008427 Quercus lobata HOM05D000319 ORTHO05D000903 3.0e-06 54.7 46 56.5
SalBow5G1249 Salvia bowleyana HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 55.3
HPP92_017215 Vanilla planifolia HOM05D000319 ORTHO05D000903 3.0e-06 54.7 47 55.3
MSTRG.10084 Avicennia marina HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 57.4
Ciclev10004406m.g Citrus clementina HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 55.3
MELO3C006647.2 Cucumis melo HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 53.2
CsaV3_3G014450 Cucumis sativus L. HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 53.2
Manes.03G193200 Manihot esculenta HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 55.3
Manes.15G013800 Manihot esculenta HOM05D000319 ORTHO05D000903 3.9e-06 54.3 47 55.3
Potri.008G217700 Populus trichocarpa HOM05D000319 ORTHO05D000903 3.9e-06 54.3 50 54.0
SGA_v2.0_scaffold86G26897 Striga asiatica HOM05D000319 ORTHO05D022957 3.9e-06 54.3 47 55.3
DCAR_024561 Daucus carota HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 55.3
Duzib133G0733 Durio zibethinus HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 57.4
Duzib133G1097 Durio zibethinus HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 57.4
Eucgr.B01285 Eucalyptus grandis HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 53.2
Hma1.2p1_0078F.1_g040680 Hydrangea macrophylla HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 53.2
Prupe.1G138700 Prunus persica HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 53.2
RcHm_v2.0_Chr4g0421701 Rosa chinensis HOM05D000319 ORTHO05D000903 5.1e-06 53.9 47 53.2
Aqoxy2G03046 Aquilegia oxysepala HOM05D000319 ORTHO05D000903 6.6e-06 53.5 47 53.2
Ca_21532_v3 Cicer arietinum L. HOM05D000319 ORTHO05D000903 6.6e-06 53.5 47 53.2
Psat1g152360 Pisum sativum HOM05D000319 ORTHO05D000903 6.6e-06 53.5 47 53.2
TPR.G35032 Trifolium pratense HOM05D000319 ORTHO05D000903 6.6e-06 53.5 47 53.2
Atru.chr4.2808 Acer truncatum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Atru.chr5.1233 Acer truncatum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 57.4
Aqoxy5G00654 Aquilegia oxysepala HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
arahy.Tifrunner.gnm1.ann1.18U4K7 Arachis hypogaea HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
arahy.Tifrunner.gnm1.ann1.A4TJW4 Arachis hypogaea HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
arahy.Tifrunner.gnm1.ann1.C5NHEB Arachis hypogaea HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
CSS0003266 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
CSS0007353 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
CDE01G0396 Ceratophyllum demersum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Glyma.07G249100 Glycine max HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Glyma.09G046500 Glycine max HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Glyma.15G154000 Glycine max HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Glyma.17G025200 Glycine max HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
HanXRQChr03g0079981 Helianthus annuus HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 55.3
Lsat_1_v5_gn_3_24140 Lactuca sativa HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 57.4
Lj4g0007474 Lotus japonicus HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Lalb_Chr07g0177651 Lupinus albus HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Lalb_Chr12g0196521 Lupinus albus HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Lalb_Chr20g0114481 Lupinus albus HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
MBI19_g23989_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
PSO210G6328 Papaver somniferum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 51.1
PSO832G1154 Papaver somniferum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 51.1
Phvul.003G103300 Phaseolus vulgaris HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
Phvul.009G246300 Phaseolus vulgaris HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
PGR004G2830 Punica granatum HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
SGA_v2.0_scaffold428G51519 Striga asiatica HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
TWI09G0531 Tripterygium wilfordii HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
VMungo1215G2210 Vigna mungo HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2
VMungo1309G1220 Vigna mungo HOM05D000319 ORTHO05D000903 8.6e-06 53.1 47 53.2


User provided reference genes

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