Gene: Solyc01g067210.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g067210.4
- Transcript Identifier Solyc01g067210.4.1
- Gene Type Coding gene
- Location SL4.0ch01 : 68391271-68396251 : positive
Gene Family Information
- ID HOM05D000319
- #Genes/#Species 1449/100
- Phylogenetic origin
- ID ORTHO05D010858
- #Genes/#Species 45/25
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g067210.4.1
- uniprot A0A3Q7EZL6
- gene_id Solyc01g067210
Descriptions
- Description Cullin (AHRD V3.3 *-* A0A200Q1J8_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
GO:0016567 | IBA | GOA Database | protein ubiquitination |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031625 | IBA IEA | GOA Database | ubiquitin protein ligase binding | |
GO:0031625 | IEA | InterPro | ubiquitin protein ligase binding | |
GO:0004842 | IBA | GOA Database | ubiquitin-protein transferase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031461 | IBA IEA | GOA Database | cullin-RING ubiquitin ligase complex |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR001373 | Cullin, N-terminal |
IPR045093 | Cullin |
IPR019559 | Cullin protein, neddylation domain |
IPR036388 | Winged helix-like DNA-binding domain superfamily |
IPR016158 | Cullin homology domain |
IPR036317 | Cullin homology domain superfamily |
IPR036390 | Winged helix DNA-binding domain superfamily |
IPR016159 | Cullin repeat-like-containing domain superfamily |
Mapman id | Description |
---|---|
19.2.2.8.1.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.scaffold component CUL1/CUL2 |