Gene: Sopen01g028980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g028980
  • Transcript Identifier Sopen01g028980.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 85501337-85512923 : positive

Gene Family Information

  • ID HOM05D000319
  • #Genes/#Species 1449/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g028980.1

Descriptions

  • Description Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. | cullin 1 (CUL1) | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Cullin homology , Cullin protein, neddylation domain , Cullin, conserved site , Cullin, N-terminal , Cullin repeat-like-containing domain | BEST Arabidopsis thaliana protein match is: cullin 2 ., Cullin, N-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
InterProubiquitin protein ligase binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016158 Cullin homology domain
IPR045093 Cullin
IPR019559 Cullin protein, neddylation domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR016159 Cullin repeat-like-containing domain superfamily
IPR036317 Cullin homology domain superfamily
IPR001373 Cullin, N-terminal
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
19.2.2.8.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.scaffold component CUL1/CUL2