Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015715001 Vitis vinifera HOM05D004364 ORTHO05D019261 1.9e-113 412.5 207 100.0
GSVIVG01014465001 Vitis vinifera HOM05D004364 ORTHO05D006299 2.5e-65 252.7 141 90.8
PGR083G1074 Punica granatum HOM05D004364 ORTHO05D006299 1.3e-53 213.8 142 79.6
GSVIVG01015714001 Vitis vinifera HOM05D004364 ORTHO05D019261 2.2e-53 213.0 121 90.1
CiPaw.11G178500 Carya illinoinensis HOM05D004364 ORTHO05D006299 3.7e-53 212.2 141 76.6
CSS0001646 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 8.3e-53 211.1 142 76.1
CSS0013066 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 1.1e-52 210.7 142 75.4
Manes.03G117700 Manihot esculenta HOM05D004364 ORTHO05D006299 1.4e-52 210.3 141 73.0
Nn1g06827 Nelumbo nucifera HOM05D004364 ORTHO05D006299 2.4e-52 209.5 142 75.4
TWI39G0400 Tripterygium wilfordii HOM05D004364 ORTHO05D006299 3.1e-52 209.1 139 75.5
Potri.011G125800 Populus trichocarpa HOM05D004364 ORTHO05D006299 5.4e-52 208.4 141 75.2
COL.COLO4_09498 Corchorus olitorius HOM05D004364 ORTHO05D006299 7.0e-52 208.0 141 76.6
Hma1.2p1_0015F.1_g010280 Hydrangea macrophylla HOM05D004364 ORTHO05D006299 7.0e-52 208.0 142 76.1
Lj8C162G4 Lonicera japonica HOM05D004364 ORTHO05D006299 1.6e-51 206.8 141 72.3
Sabra11G0111700 Salix brachista HOM05D004364 ORTHO05D006299 1.6e-51 206.8 141 75.2
Haze_09550 Corylus avellana HOM05D004364 ORTHO05D006299 2.0e-51 206.5 142 76.8
TAR626G1658 Trochodendron aralioides HOM05D004364 ORTHO05D006299 5.9e-51 204.9 142 73.9
Ciclev10007478m.g Citrus clementina HOM05D004364 ORTHO05D006299 7.7e-51 204.5 141 71.6
Gohir.A08G020600 Gossypium hirsutum HOM05D004364 ORTHO05D006299 1.3e-50 203.8 141 73.8
Cfa020489 Carpinus fangiana HOM05D004364 ORTHO05D006299 1.7e-50 203.4 142 76.1
AT3G20630 Arabidopsis thaliana HOM05D004364 ORTHO05D006299 2.3e-50 203.0 141 73.8
Potri.001G408800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.3e-50 203.0 141 73.8
Eucgr.F01066 Eucalyptus grandis HOM05D004364 ORTHO05D006299 2.9e-50 202.6 142 73.9
Thhalv10020069m.g Eutrema salsugineum HOM05D004364 ORTHO05D006299 2.9e-50 202.6 141 74.5
Gohir.D08G031200 Gossypium hirsutum HOM05D004364 ORTHO05D006299 2.9e-50 202.6 141 73.8
Gorai.004G028800 Gossypium raimondii HOM05D004364 ORTHO05D006299 2.9e-50 202.6 141 73.8
MD11G1234900 Malus domestica HOM05D004364 ORTHO05D006299 5.0e-50 201.8 141 77.3
Phvul.011G156100 Phaseolus vulgaris HOM05D004364 ORTHO05D006299 5.0e-50 201.8 141 75.9
Sp3g18670 Schrenkiella parvula HOM05D004364 ORTHO05D006299 6.5e-50 201.4 141 73.8
vmacro09573 Vaccinium macrocarpon HOM05D004364 ORTHO05D006299 1.1e-49 200.7 141 76.6
Atru.chr2.2938 Acer truncatum HOM05D004364 ORTHO05D006299 1.5e-49 200.3 141 73.8
AL3G34510 Arabidopsis lyrata HOM05D004364 ORTHO05D006299 1.5e-49 200.3 141 73.0
RhsimUnG0257500 Rhododendron simsii HOM05D004364 ORTHO05D006299 1.5e-49 200.3 141 75.2
ECA240G1374 Erigeron canadensis HOM05D004364 ORTHO05D006299 1.9e-49 199.9 141 73.8
Carub.0003s2061 Capsella rubella HOM05D004364 ORTHO05D006299 4.2e-49 198.7 141 73.8
Lj3g0027191 Lotus japonicus HOM05D004364 ORTHO05D006299 5.5e-49 198.4 141 75.2
Lalb_Chr06g0175311 Lupinus albus HOM05D004364 ORTHO05D006299 5.5e-49 198.4 141 74.5
Prupe.4G192200 Prunus persica HOM05D004364 ORTHO05D006299 7.2e-49 198.0 141 72.3
BcaB04g19118 Brassica carinata HOM05D004364 ORTHO05D006299 9.5e-49 197.6 141 73.0
Duzib170G0088 Durio zibethinus HOM05D004364 ORTHO05D006299 1.2e-48 197.2 141 73.8
Thecc.07G069000 Theobroma cacao HOM05D004364 ORTHO05D006299 1.6e-48 196.8 141 73.0
A03p41850 Brassica napus HOM05D004364 ORTHO05D006299 2.1e-48 196.4 141 72.3
BraA03t13338Z Brassica rapa HOM05D004364 ORTHO05D006299 2.1e-48 196.4 141 72.3
Cpa.g.sc12.20 Carica papaya HOM05D004364 ORTHO05D006299 2.8e-48 196.1 141 72.3
Ca_01795_v3 Cicer arietinum L. HOM05D004364 ORTHO05D006299 2.8e-48 196.1 141 73.8
BcaC05g28303 Brassica carinata HOM05D004364 ORTHO05D006299 3.6e-48 195.7 141 71.6
A05p28190 Brassica napus HOM05D004364 ORTHO05D006299 3.6e-48 195.7 141 71.6
C05p43630 Brassica napus HOM05D004364 ORTHO05D006299 3.6e-48 195.7 141 71.6
HanXRQChr03g0076071 Helianthus annuus HOM05D004364 ORTHO05D006299 3.6e-48 195.7 141 73.0
BcaB06g26128 Brassica carinata HOM05D004364 ORTHO05D006299 4.7e-48 195.3 141 71.6
Sc16g0006700 Simmondsia chinensis HOM05D004364 ORTHO05D006299 4.7e-48 195.3 141 70.9
CANSAT11G0334 Cannabis sativa HOM05D004364 ORTHO05D006299 6.1e-48 194.9 141 70.2
BolC5t33082H Brassica oleracea HOM05D004364 ORTHO05D006299 8.0e-48 194.5 141 70.9
FvH4_3g21160 Fragaria vesca HOM05D004364 ORTHO05D006299 8.0e-48 194.5 141 73.8
FAN11G0387 Fragaria x ananassa HOM05D004364 ORTHO05D006299 8.0e-48 194.5 141 73.8
CARHR096430 Cardamine hirsuta HOM05D004364 ORTHO05D006299 1.0e-47 194.1 141 70.2
DCAR_008692 Daucus carota HOM05D004364 ORTHO05D006299 1.0e-47 194.1 141 68.1
BraA05t21700Z Brassica rapa HOM05D004364 ORTHO05D006299 1.4e-47 193.7 141 70.9
Aa31LG8G7430 Aethionema arabicum HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 70.2
BcaC01g03545 Brassica carinata HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 71.6
C03p51230 Brassica napus HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 71.6
BolC3t17413H Brassica oleracea HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 71.6
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 73.0
FAN21G1304 Fragaria x ananassa HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 73.0
Oeu060533.1 Olea europaea HOM05D004364 ORTHO05D006299 4.0e-47 192.2 141 68.8
Lsat_1_v5_gn_0_5341 Lactuca sativa HOM05D004364 ORTHO05D006299 6.8e-47 191.4 141 68.8
Psat5g247520 Pisum sativum HOM05D004364 ORTHO05D006299 6.8e-47 191.4 141 71.6
THA.LOC104816919 Tarenaya hassleriana HOM05D004364 ORTHO05D006299 6.8e-47 191.4 155 67.1
HanXRQChr13g0407291 Helianthus annuus HOM05D004364 ORTHO05D006299 8.9e-47 191.0 141 70.9
MELO3C018182.2 Cucumis melo HOM05D004364 ORTHO05D006299 1.2e-46 190.7 141 70.9
FAN25G2975 Fragaria x ananassa HOM05D004364 ORTHO05D006299 1.2e-46 190.7 141 72.3
Glyma.12G146600 Glycine max HOM05D004364 ORTHO05D006299 1.2e-46 190.7 141 73.0
Lalb_Chr02g0159341 Lupinus albus HOM05D004364 ORTHO05D006299 1.2e-46 190.7 139 71.9
RcHm_v2.0_Chr5g0036241 Rosa chinensis HOM05D004364 ORTHO05D006299 1.2e-46 190.7 141 72.3
ClCG11G018570 Citrullus lanatus HOM05D004364 ORTHO05D006299 1.5e-46 190.3 141 70.9
CsaV3_3G044300 Cucumis sativus L. HOM05D004364 ORTHO05D006299 3.4e-46 189.1 141 70.9
Sed0018829 Sechium edule HOM05D004364 ORTHO05D006299 3.4e-46 189.1 141 70.9
TPR.G32881 Trifolium pratense HOM05D004364 ORTHO05D006299 3.4e-46 189.1 141 71.6
MD03G1217200 Malus domestica HOM05D004364 ORTHO05D006299 4.4e-46 188.7 141 73.0
PSO210G4872 Papaver somniferum HOM05D004364 ORTHO05D006299 4.4e-46 188.7 141 69.5
Nitab4.5_0000092g0270 Nicotiana tabacum HOM05D004364 ORTHO05D006299 5.7e-46 188.3 141 67.4
Peaxi162Scf01216g00070 Petunia axillaris HOM05D004364 ORTHO05D006299 7.5e-46 188.0 141 68.1
Os01g0177200 Oryza sativa ssp. japonica HOM05D004364 ORTHO05D006299 9.8e-46 187.6 142 68.3
Nitab4.5_0001386g0060 Nicotiana tabacum HOM05D004364 ORTHO05D006299 2.2e-45 186.4 141 66.7
EL10Ac4g08041 Beta vulgaris HOM05D004364 ORTHO05D006299 2.8e-45 186.0 138 71.0
arahy.Tifrunner.gnm1.ann1.B7TU6S Arachis hypogaea HOM05D004364 ORTHO05D006299 3.7e-45 185.7 143 70.6
PSO832G2674 Papaver somniferum HOM05D004364 ORTHO05D006299 3.7e-45 185.7 141 68.8
Hund02178 Selenicereus undatus HOM05D004364 ORTHO05D006299 6.3e-45 184.9 141 66.0
Nitab4.5_0000297g0190 Nicotiana tabacum HOM05D004364 ORTHO05D006299 8.3e-45 184.5 141 66.7
Glyma.06G255000 Glycine max HOM05D004364 ORTHO05D006299 1.1e-44 184.1 141 71.6
Solyc07g063650.4 Solanum lycopersicum HOM05D004364 ORTHO05D006299 1.1e-44 184.1 141 66.7
Zm00001eb336890 Zea mays HOM05D004364 ORTHO05D006299 1.1e-44 184.1 142 68.3
arahy.Tifrunner.gnm1.ann1.19RIMK Arachis hypogaea HOM05D004364 ORTHO05D006299 1.8e-44 183.3 143 69.9
Aqoxy5G02435 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 3.1e-44 182.6 140 67.9
Cc05_g12790 Coffea canephora HOM05D004364 ORTHO05D006299 3.1e-44 182.6 141 66.7
Sopen07g031830 Solanum pennellii HOM05D004364 ORTHO05D006299 3.1e-44 182.6 141 66.7
Ah.04g165340 Amaranthus hybridus HOM05D004364 ORTHO05D006299 9.2e-44 181.0 141 65.2
Medtr2g081180 Medicago truncatula HOM05D004364 ORTHO05D006299 9.2e-44 181.0 141 68.8
CAN.G162.111 Capsicum annuum HOM05D004364 ORTHO05D006299 1.2e-43 180.6 141 67.4
AUR62029293 Chenopodium quinoa HOM05D004364 ORTHO05D006299 2.0e-43 179.9 140 65.0
arahy.Tifrunner.gnm1.ann1.CZGD0C Arachis hypogaea HOM05D004364 ORTHO05D006299 2.7e-43 179.5 143 69.2
Manes.15G081800 Manihot esculenta HOM05D004364 ORTHO05D006299 7.8e-43 177.9 141 68.1
Aqoxy1G03944 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 1.3e-42 177.2 140 65.7
SalBow7G1127 Salvia bowleyana HOM05D004364 ORTHO05D006299 5.0e-42 175.3 141 64.5
HPP92_005995 Vanilla planifolia HOM05D004364 ORTHO05D006299 2.5e-41 172.9 142 62.7
SGA_v2.0_scaffold9G04963 Striga asiatica HOM05D004364 ORTHO05D006299 9.5e-41 171.0 141 61.7
ATR1132G023 Amborella trichopoda HOM05D004364 ORTHO05D006299 1.2e-40 170.6 142 64.1
Migut.H01895 Erythranthe guttata HOM05D004364 ORTHO05D006299 1.2e-40 170.6 141 63.1
MSTRG.12935 Avicennia marina HOM05D004364 ORTHO05D006299 2.1e-40 169.9 143 63.6
AUR62041167 Chenopodium quinoa HOM05D004364 ORTHO05D006299 2.8e-40 169.5 148 60.8
SEGI_22005 Sequoiadendron giganteum HOM05D004364 ORTHO05D006299 1.2e-38 164.1 141 61.0
CDE01G0428 Ceratophyllum demersum HOM05D004364 ORTHO05D006299 1.5e-38 163.7 110 74.5
Mapoly0028s0083 Marchantia polymorpha HOM05D004364 ORTHO05D006299 2.9e-37 159.5 143 59.4
GSVIVG01014462001 Vitis vinifera HOM05D004364 ORTHO05D019261 2.7e-35 152.9 85 90.6
SMO347G0465 Selaginella moellendorffii HOM05D004364 ORTHO05D006299 8.6e-34 147.9 141 54.6
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 9.5e-33 144.4 97 76.3
Pp3c19_17130 Physcomitrium patens HOM05D004364 ORTHO05D006299 4.7e-32 142.1 142 57.0
unitig_21.g20140 Utricularia gibba HOM05D004364 ORTHO05D006299 6.2e-32 141.7 130 57.7
TPR.G1046 Trifolium pratense HOM05D004364 ORTHO05D019261 4.0e-31 139.0 167 55.1
Nitab4.5_0001252g0070 Nicotiana tabacum HOM05D004364 ORTHO05D006299 7.0e-28 128.3 95 68.4
Lj1g0005584 Lotus japonicus HOM05D004364 ORTHO05D006299 9.2e-28 127.9 89 76.4
Peaxi162Scf00177g00118 Petunia axillaris HOM05D004364 ORTHO05D006299 2.7e-27 126.3 95 68.4
Actinidia35287 Actinidia chinensis HOM05D004364 ORTHO05D006299 5.1e-26 122.1 78 79.5
SEGI_31233 Sequoiadendron giganteum HOM05D004364 ORTHO05D019261 1.7e-21 107.1 115 52.2
Sed0014921 Sechium edule HOM05D004364 ORTHO05D006299 3.2e-20 102.8 69 73.9
Medtr8g464880 Medicago truncatula HOM05D004364 ORTHO05D019261 3.5e-19 99.4 78 67.9
TAR624G0100 Trochodendron aralioides HOM05D004364 ORTHO05D006299 5.1e-18 95.5 140 43.6
PRCOL_00003961 Prasinoderma coloniale HOM05D004364 ORTHO05D006299 1.1e-15 87.8 150 36.0
MCO15G328 Micromonas commoda HOM05D004364 ORTHO05D006299 1.9e-12 77.0 156 35.3
Cre02.g080350 Chlamydomonas reinhardtii HOM05D004364 ORTHO05D006299 2.4e-12 76.6 166 31.9
TAR011G0002 Trochodendron aralioides HOM05D004364 ORTHO05D019261 5.4e-12 75.5 96 52.1
Dinv22351 Davidia involucrata HOM05D004364 ORTHO05D006299 1.1e-09 67.8 40 80.0
CBR_g17932 Chara braunii HOM05D004364 ORTHO05D006299 8.1e-08 61.6 73 43.8
Rhsim05G0038700 Rhododendron simsii HOM05D031300 ORTHO05D339751 2.0e-06 57.0 79 45.6
Lj8A161G44 Lonicera japonica HOM05D004364 ORTHO05D006299 9.9e-06 54.7 38 65.8


User provided reference genes

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