Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014799001 Vitis vinifera HOM05D003738 ORTHO05D029311 1.7e-54 215.7 106 100.0
Psat1g052800 Pisum sativum HOM05D003738 ORTHO05D005143 1.7e-22 109.4 112 52.7
Nn4g24034 Nelumbo nucifera HOM05D003738 ORTHO05D005143 3.0e-22 108.6 92 57.6
Manes.01G113700 Manihot esculenta HOM05D003738 ORTHO05D005143 5.0e-22 107.8 86 59.3
Eucgr.F02797 Eucalyptus grandis HOM05D003738 ORTHO05D005143 6.6e-22 107.5 88 59.1
CSS0050020 Camellia sinensis var. sinensis HOM05D003738 ORTHO05D005143 8.6e-22 107.1 90 56.7
Nitab4.5_0002456g0020 Nicotiana tabacum HOM05D003738 ORTHO05D005143 8.6e-22 107.1 89 53.9
CAN.G625.63 Capsicum annuum HOM05D003738 ORTHO05D005143 1.5e-21 106.3 88 55.7
Ca_04135_v3 Cicer arietinum L. HOM05D003738 ORTHO05D005143 1.9e-21 105.9 97 54.6
Nitab4.5_0007290g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 1.9e-21 105.9 89 53.9
Cc07_g08440 Coffea canephora HOM05D003738 ORTHO05D005143 2.5e-21 105.5 89 55.1
Nitab4.5_0011323g0010 Nicotiana tabacum HOM05D003738 ORTHO05D005143 2.5e-21 105.5 89 53.9
TPR.G25203 Trifolium pratense HOM05D003738 ORTHO05D005143 2.5e-21 105.5 97 55.7
MD09G1258100 Malus domestica HOM05D003738 ORTHO05D005143 3.3e-21 105.1 90 56.7
Peaxi162Scf00129g00317 Petunia axillaris HOM05D003738 ORTHO05D005143 3.3e-21 105.1 88 58.0
Sed0022193 Sechium edule HOM05D003738 ORTHO05D005143 3.3e-21 105.1 91 56.0
MELO3C010381.2 Cucumis melo HOM05D003738 ORTHO05D005143 7.3e-21 104.0 91 54.9
ClCG07G016430 Citrullus lanatus HOM05D003738 ORTHO05D005143 9.5e-21 103.6 88 56.8
Ciclev10011371m.g Citrus clementina HOM05D003738 ORTHO05D005143 9.5e-21 103.6 115 47.0
Ciclev10011616m.g Citrus clementina HOM05D003738 ORTHO05D005143 9.5e-21 103.6 115 47.0
COL.COLO4_27155 Corchorus olitorius HOM05D003738 ORTHO05D005143 9.5e-21 103.6 88 58.0
CsaV3_4G010390 Cucumis sativus L. HOM05D003738 ORTHO05D005143 9.5e-21 103.6 91 54.9
Lsat_1_v5_gn_2_80860 Lactuca sativa HOM05D003738 ORTHO05D005143 9.5e-21 103.6 93 51.6
Peaxi162Scf00458g00011 Petunia axillaris HOM05D003738 ORTHO05D005143 9.5e-21 103.6 88 56.8
MD00G1054500 Malus domestica HOM05D003738 ORTHO05D005143 1.2e-20 103.2 90 55.6
Actinidia36345 Actinidia chinensis HOM05D003738 ORTHO05D005143 2.1e-20 102.4 91 56.0
Solyc02g091100.3 Solanum lycopersicum HOM05D003738 ORTHO05D005143 2.1e-20 102.4 88 54.5
Sopen02g035750 Solanum pennellii HOM05D003738 ORTHO05D005143 2.1e-20 102.4 88 54.5
CiPaw.03G065800 Carya illinoinensis HOM05D003738 ORTHO05D005143 2.8e-20 102.1 88 55.7
CDE07G0683 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 2.8e-20 102.1 84 56.0
SalBow4G0814 Salvia bowleyana HOM05D003738 ORTHO05D005143 2.8e-20 102.1 84 58.3
PGSC0003DMG400030633 Solanum tuberosum HOM05D003738 ORTHO05D005143 2.8e-20 102.1 88 54.5
DCAR_025892 Daucus carota HOM05D003738 ORTHO05D005143 3.6e-20 101.7 88 53.4
Migut.L00189 Erythranthe guttata HOM05D003738 ORTHO05D005143 3.6e-20 101.7 84 60.7
COL.COLO4_12270 Corchorus olitorius HOM05D003738 ORTHO05D005143 4.7e-20 101.3 88 55.7
Potri.004G094600 Populus trichocarpa HOM05D003738 ORTHO05D005143 6.2e-20 100.9 93 50.5
Lj2A438T57 Lonicera japonica HOM05D003738 ORTHO05D005143 8.1e-20 100.5 88 54.5
SGA_v2.0_scaffold329G48870 Striga asiatica HOM05D003738 ORTHO05D005143 8.1e-20 100.5 84 57.1
TAR374G0852 Trochodendron aralioides HOM05D003738 ORTHO05D005143 8.1e-20 100.5 88 55.7
CANSAT78G1141 Cannabis sativa HOM05D003738 ORTHO05D005143 1.4e-19 99.8 89 51.7
CDE06G1483 Ceratophyllum demersum HOM05D003738 ORTHO05D005143 1.8e-19 99.4 84 54.8
Hund13699 Selenicereus undatus HOM05D003738 ORTHO05D005143 1.8e-19 99.4 84 58.3
arahy.Tifrunner.gnm1.ann1.KYQ4XK Arachis hypogaea HOM05D003738 ORTHO05D005143 2.3e-19 99.0 90 53.3
arahy.Tifrunner.gnm1.ann1.UI9B1P Arachis hypogaea HOM05D003738 ORTHO05D005143 2.3e-19 99.0 98 52.0
Duzib138G1092 Durio zibethinus HOM05D003738 ORTHO05D005143 2.3e-19 99.0 93 52.7
Lj2g0012793 Lotus japonicus HOM05D003738 ORTHO05D005143 2.3e-19 99.0 87 55.2
Prupe.3G150000 Prunus persica HOM05D003738 ORTHO05D005143 2.3e-19 99.0 88 53.4
AUR62023216 Chenopodium quinoa HOM05D003738 ORTHO05D005143 3.1e-19 98.6 78 53.8
Lalb_Chr02g0160571 Lupinus albus HOM05D003738 ORTHO05D005143 4.0e-19 98.2 92 50.0
Sabra04G0063900 Salix brachista HOM05D003738 ORTHO05D005143 4.0e-19 98.2 93 49.5
Cfa007882 Carpinus fangiana HOM05D003738 ORTHO05D005143 5.2e-19 97.8 88 53.4
Haze_14195 Corylus avellana HOM05D003738 ORTHO05D005143 5.2e-19 97.8 88 53.4
Gohir.A11G166650 Gossypium hirsutum HOM05D003738 ORTHO05D005143 5.2e-19 97.8 88 53.4
MBI16_g21165_MAGBIO Magnolia biondii HOM05D003738 ORTHO05D005143 5.2e-19 97.8 93 49.5
Rhsim10G0076800 Rhododendron simsii HOM05D003738 ORTHO05D005143 5.2e-19 97.8 88 52.3
TWI74G0253 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 5.2e-19 97.8 88 52.3
HanXRQChr07g0193781 Helianthus annuus HOM05D003738 ORTHO05D005143 6.8e-19 97.4 87 52.9
RcHm_v2.0_Chr3g0494041 Rosa chinensis HOM05D003738 ORTHO05D005143 6.8e-19 97.4 84 54.8
TWI77G0590 Tripterygium wilfordii HOM05D003738 ORTHO05D005143 6.8e-19 97.4 88 52.3
Atru.chr1.1579 Acer truncatum HOM05D003738 ORTHO05D005143 1.2e-18 96.7 94 50.0
Ah.16g101450 Amaranthus hybridus HOM05D003738 ORTHO05D005143 1.2e-18 96.7 76 56.6
Thecc.04G126300 Theobroma cacao HOM05D003738 ORTHO05D005143 1.2e-18 96.7 80 53.8
AUR62023263 Chenopodium quinoa HOM05D003738 ORTHO05D005143 1.5e-18 96.3 78 52.6
FvH4_1g28990 Fragaria vesca HOM05D003738 ORTHO05D005143 1.5e-18 96.3 90 51.1
Oeu061823.1 Olea europaea HOM05D003738 ORTHO05D005143 1.5e-18 96.3 90 53.3
Gorai.007G185300 Gossypium raimondii HOM05D003738 ORTHO05D005143 2.0e-18 95.9 88 52.3
Duzib133G1513 Durio zibethinus HOM05D003738 ORTHO05D005143 2.6e-18 95.5 88 52.3
FAN26G1505 Fragaria x ananassa HOM05D003738 ORTHO05D005143 2.6e-18 95.5 90 50.0
THA.LOC104820853 Tarenaya hassleriana HOM05D003738 ORTHO05D005143 2.6e-18 95.5 88 52.3
Aqoxy3G00165 Aquilegia oxysepala HOM05D003738 ORTHO05D005143 3.4e-18 95.1 85 51.8
Cpa.g.sc170.16 Carica papaya HOM05D003738 ORTHO05D005143 3.4e-18 95.1 88 51.1
Gohir.D11G173000 Gossypium hirsutum HOM05D003738 ORTHO05D005143 3.4e-18 95.1 88 52.3
QL02p049823 Quercus lobata HOM05D003738 ORTHO05D005143 3.4e-18 95.1 88 52.3
Sc10g0001020 Simmondsia chinensis HOM05D003738 ORTHO05D005143 3.4e-18 95.1 92 47.8
FAN19G0768 Fragaria x ananassa HOM05D003738 ORTHO05D005143 4.4e-18 94.7 90 50.0
EL10Ac2g04518 Beta vulgaris HOM05D003738 ORTHO05D005143 5.8e-18 94.4 87 48.3
FAN23G1334 Fragaria x ananassa HOM05D003738 ORTHO05D005143 7.5e-18 94.0 90 50.0
vmacro05488 Vaccinium macrocarpon HOM05D003738 ORTHO05D005143 7.5e-18 94.0 92 50.0
MSTRG.15310 Avicennia marina HOM05D003738 ORTHO05D005143 9.8e-18 93.6 84 56.0
SHI25638 Sapria himalayana HOM05D003738 ORTHO05D005143 2.2e-17 92.4 87 48.3
HPP92_003826 Vanilla planifolia HOM05D003738 ORTHO05D005143 2.9e-17 92.0 88 48.9
AT5G17380 Arabidopsis thaliana HOM05D003738 ORTHO05D005143 4.9e-17 91.3 88 47.7
Lalb_Chr06g0176761 Lupinus albus HOM05D003738 ORTHO05D005143 4.9e-17 91.3 85 49.4
Thhalv10013104m.g Eutrema salsugineum HOM05D003738 ORTHO05D005143 8.3e-17 90.5 89 48.3
Os01g0505400 Oryza sativa ssp. japonica HOM05D003738 ORTHO05D005143 8.3e-17 90.5 86 46.5
AL6G28450 Arabidopsis lyrata HOM05D003738 ORTHO05D005143 1.1e-16 90.1 85 48.2
ECA238G0020 Erigeron canadensis HOM05D003738 ORTHO05D005143 1.1e-16 90.1 93 45.2
Medtr6g004200 Medicago truncatula HOM05D003738 ORTHO05D005143 1.4e-16 89.7 100 46.0
PSO170G1643 Papaver somniferum HOM05D003738 ORTHO05D005143 1.4e-16 89.7 88 46.6
Aa31LG11G12270 Aethionema arabicum HOM05D003738 ORTHO05D005143 1.9e-16 89.4 95 44.2
Glyma.02G238800 Glycine max HOM05D003738 ORTHO05D005143 1.9e-16 89.4 92 47.8
Sp6g26840 Schrenkiella parvula HOM05D003738 ORTHO05D005143 1.9e-16 89.4 88 48.9
CARHR195830 Cardamine hirsuta HOM05D003738 ORTHO05D005143 2.4e-16 89.0 84 48.8
Phvul.008G243200 Phaseolus vulgaris HOM05D003738 ORTHO05D005143 2.4e-16 89.0 87 50.6
GSVIVG01014800001 Vitis vinifera HOM05D003738 ORTHO05D029311 2.4e-16 89.0 51 86.3
Zm00001eb336870 Zea mays HOM05D003738 ORTHO05D005143 3.2e-16 88.6 86 47.7
Carub.0006s1559 Capsella rubella HOM05D003738 ORTHO05D005143 1.2e-15 86.7 88 46.6
PSO455G0115 Papaver somniferum HOM05D003738 ORTHO05D005143 1.2e-15 86.7 88 45.5
BcaB08g36776 Brassica carinata HOM05D003738 ORTHO05D005143 3.5e-15 85.1 85 47.1
Glyma.14G207700 Glycine max HOM05D003738 ORTHO05D005143 3.5e-15 85.1 83 49.4
PSO017G1959 Papaver somniferum HOM05D003738 ORTHO05D005143 7.8e-15 84.0 88 44.3
BcaC04g18797 Brassica carinata HOM05D003738 ORTHO05D005143 1.7e-14 82.8 84 46.4
C09p59780 Brassica napus HOM05D003738 ORTHO05D005143 1.7e-14 82.8 84 46.4
BolC9t58818H Brassica oleracea HOM05D003738 ORTHO05D005143 1.7e-14 82.8 84 46.4
VMungo0647G1516 Vigna mungo HOM05D003738 ORTHO05D005143 1.7e-14 82.8 87 47.1
A10p22030 Brassica napus HOM05D003738 ORTHO05D005143 2.3e-14 82.4 88 45.5
BraA10t44260Z Brassica rapa HOM05D003738 ORTHO05D005143 2.3e-14 82.4 88 45.5
SMO196G0015 Selaginella moellendorffii HOM05D003738 ORTHO05D005143 8.6e-14 80.5 84 45.2
AagrBONN_evm.TU.Sc2ySwM_369.580 Anthoceros agrestis HOM05D003738 ORTHO05D005143 2.5e-13 79.0 75 46.7
SEGI_09825 Sequoiadendron giganteum HOM05D003738 ORTHO05D005143 2.5e-13 79.0 84 45.2
Migut.O00638 Erythranthe guttata HOM05D003738 ORTHO05D029311 2.1e-12 75.9 86 47.7
Mapoly0099s0049 Marchantia polymorpha HOM05D003738 ORTHO05D005143 4.7e-12 74.7 84 41.7
ATR0057G018 Amborella trichopoda HOM05D003738 ORTHO05D005143 8.1e-12 73.9 83 43.4
Pp3c3_25360 Physcomitrium patens HOM05D003738 ORTHO05D005143 2.3e-11 72.4 84 39.3
CBR_g39223 Chara braunii HOM05D003738 ORTHO05D005143 4.0e-11 71.6 97 40.2
Cc01_g08190 Coffea canephora HOM05D003738 ORTHO05D005143 1.7e-09 66.2 61 54.1
Zm00001eb155110 Zea mays HOM05D003738 ORTHO05D029311 6.4e-09 64.3 53 50.9


User provided reference genes

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