Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014461001 Vitis vinifera HOM05D004364 ORTHO05D006299 1.4e-74 282.7 133 100.0
GSVIVG01014465001 Vitis vinifera HOM05D004364 ORTHO05D006299 1.9e-50 202.6 101 94.1
MD03G1217200 Malus domestica HOM05D004364 ORTHO05D006299 3.5e-44 181.8 103 85.4
CANSAT11G0334 Cannabis sativa HOM05D004364 ORTHO05D006299 1.0e-43 180.3 103 80.6
Prupe.4G192200 Prunus persica HOM05D004364 ORTHO05D006299 8.5e-43 177.2 103 81.6
FvH4_3g21160 Fragaria vesca HOM05D004364 ORTHO05D006299 3.2e-42 175.3 103 81.6
MD11G1234900 Malus domestica HOM05D004364 ORTHO05D006299 4.2e-42 174.9 103 81.6
TAR626G1658 Trochodendron aralioides HOM05D004364 ORTHO05D006299 4.2e-42 174.9 102 78.4
Manes.03G117700 Manihot esculenta HOM05D004364 ORTHO05D006299 5.5e-42 174.5 105 79.0
Atru.chr2.2938 Acer truncatum HOM05D004364 ORTHO05D006299 7.2e-42 174.1 103 78.6
FAN11G0387 Fragaria x ananassa HOM05D004364 ORTHO05D006299 7.2e-42 174.1 103 80.6
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 7.2e-42 174.1 103 81.6
FAN21G1304 Fragaria x ananassa HOM05D004364 ORTHO05D006299 7.2e-42 174.1 103 81.6
RcHm_v2.0_Chr5g0036241 Rosa chinensis HOM05D004364 ORTHO05D006299 7.2e-42 174.1 103 80.6
Nn1g06827 Nelumbo nucifera HOM05D004364 ORTHO05D006299 9.4e-42 173.7 102 78.4
Eucgr.F01066 Eucalyptus grandis HOM05D004364 ORTHO05D006299 1.6e-41 172.9 103 78.6
CiPaw.11G178500 Carya illinoinensis HOM05D004364 ORTHO05D006299 2.1e-41 172.6 103 80.6
Ciclev10007478m.g Citrus clementina HOM05D004364 ORTHO05D006299 2.1e-41 172.6 103 77.7
Cfa020489 Carpinus fangiana HOM05D004364 ORTHO05D006299 3.6e-41 171.8 100 80.0
Manes.15G081800 Manihot esculenta HOM05D004364 ORTHO05D006299 6.1e-41 171.0 103 79.6
Sed0018829 Sechium edule HOM05D004364 ORTHO05D006299 1.0e-40 170.2 102 77.5
MELO3C018182.2 Cucumis melo HOM05D004364 ORTHO05D006299 1.4e-40 169.9 105 75.2
CsaV3_3G044300 Cucumis sativus L. HOM05D004364 ORTHO05D006299 1.8e-40 169.5 105 75.2
ClCG11G018570 Citrullus lanatus HOM05D004364 ORTHO05D006299 3.0e-40 168.7 105 75.2
Lj8C162G4 Lonicera japonica HOM05D004364 ORTHO05D006299 3.9e-40 168.3 101 75.2
AUR62041167 Chenopodium quinoa HOM05D004364 ORTHO05D006299 6.7e-40 167.5 101 71.3
Cpa.g.sc12.20 Carica papaya HOM05D004364 ORTHO05D006299 8.8e-40 167.2 103 76.7
PSO210G4872 Papaver somniferum HOM05D004364 ORTHO05D006299 8.8e-40 167.2 102 76.5
Duzib170G0088 Durio zibethinus HOM05D004364 ORTHO05D006299 2.0e-39 166.0 104 76.9
PSO832G2674 Papaver somniferum HOM05D004364 ORTHO05D006299 3.3e-39 165.2 102 75.5
Sabra11G0111700 Salix brachista HOM05D004364 ORTHO05D006299 3.3e-39 165.2 103 75.7
TPR.G32881 Trifolium pratense HOM05D004364 ORTHO05D006299 3.3e-39 165.2 103 78.6
TWI39G0400 Tripterygium wilfordii HOM05D004364 ORTHO05D006299 3.3e-39 165.2 104 76.9
FAN25G2975 Fragaria x ananassa HOM05D004364 ORTHO05D006299 5.7e-39 164.5 102 77.5
Gohir.D08G031200 Gossypium hirsutum HOM05D004364 ORTHO05D006299 7.4e-39 164.1 104 75.0
Gorai.004G028800 Gossypium raimondii HOM05D004364 ORTHO05D006299 7.4e-39 164.1 104 75.0
Medtr2g081180 Medicago truncatula HOM05D004364 ORTHO05D006299 7.4e-39 164.1 104 76.9
Nitab4.5_0000297g0190 Nicotiana tabacum HOM05D004364 ORTHO05D006299 7.4e-39 164.1 101 75.2
Nitab4.5_0001252g0070 Nicotiana tabacum HOM05D004364 ORTHO05D006299 7.4e-39 164.1 101 75.2
Nitab4.5_0001386g0060 Nicotiana tabacum HOM05D004364 ORTHO05D006299 7.4e-39 164.1 101 75.2
Psat5g247520 Pisum sativum HOM05D004364 ORTHO05D006299 7.4e-39 164.1 103 76.7
Aqoxy1G03944 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 9.7e-39 163.7 102 76.5
CAN.G162.111 Capsicum annuum HOM05D004364 ORTHO05D006299 9.7e-39 163.7 101 74.3
Gohir.A08G020600 Gossypium hirsutum HOM05D004364 ORTHO05D006299 9.7e-39 163.7 104 75.0
Lalb_Chr02g0159341 Lupinus albus HOM05D004364 ORTHO05D006299 9.7e-39 163.7 105 78.1
Lalb_Chr06g0175311 Lupinus albus HOM05D004364 ORTHO05D006299 9.7e-39 163.7 105 77.1
Peaxi162Scf00177g00118 Petunia axillaris HOM05D004364 ORTHO05D006299 9.7e-39 163.7 101 77.2
Peaxi162Scf01216g00070 Petunia axillaris HOM05D004364 ORTHO05D006299 9.7e-39 163.7 101 77.2
Nitab4.5_0000092g0270 Nicotiana tabacum HOM05D004364 ORTHO05D006299 2.2e-38 162.5 101 74.3
Hma1.2p1_0015F.1_g010280 Hydrangea macrophylla HOM05D004364 ORTHO05D006299 2.8e-38 162.2 103 69.9
Potri.011G125800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.8e-38 162.2 103 75.7
Ah.04g165340 Amaranthus hybridus HOM05D004364 ORTHO05D006299 6.3e-38 161.0 101 68.3
Ca_01795_v3 Cicer arietinum L. HOM05D004364 ORTHO05D006299 8.2e-38 160.6 99 77.8
Solyc07g063650.4 Solanum lycopersicum HOM05D004364 ORTHO05D006299 1.4e-37 159.8 101 71.3
Sopen07g031830 Solanum pennellii HOM05D004364 ORTHO05D006299 1.4e-37 159.8 101 71.3
EL10Ac4g08041 Beta vulgaris HOM05D004364 ORTHO05D006299 7.0e-37 157.5 105 67.6
ATR1132G023 Amborella trichopoda HOM05D004364 ORTHO05D006299 9.1e-37 157.1 106 66.0
PGR083G1074 Punica granatum HOM05D004364 ORTHO05D006299 9.1e-37 157.1 103 71.8
Hund02178 Selenicereus undatus HOM05D004364 ORTHO05D006299 1.2e-36 156.8 100 73.0
Sc16g0006700 Simmondsia chinensis HOM05D004364 ORTHO05D006299 1.2e-36 156.8 104 67.3
Potri.001G408800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.6e-36 155.6 103 71.8
ECA240G1374 Erigeron canadensis HOM05D004364 ORTHO05D006299 3.5e-36 155.2 101 71.3
vmacro09573 Vaccinium macrocarpon HOM05D004364 ORTHO05D006299 3.5e-36 155.2 101 70.3
Aqoxy5G02435 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 4.5e-36 154.8 102 74.5
Phvul.011G156100 Phaseolus vulgaris HOM05D004364 ORTHO05D006299 5.9e-36 154.5 103 71.8
arahy.Tifrunner.gnm1.ann1.19RIMK Arachis hypogaea HOM05D004364 ORTHO05D006299 7.7e-36 154.1 101 72.3
arahy.Tifrunner.gnm1.ann1.B7TU6S Arachis hypogaea HOM05D004364 ORTHO05D006299 7.7e-36 154.1 101 73.3
CSS0001646 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 7.7e-36 154.1 101 73.3
CSS0013066 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 7.7e-36 154.1 101 73.3
Cc05_g12790 Coffea canephora HOM05D004364 ORTHO05D006299 1.0e-35 153.7 98 71.4
Thecc.07G069000 Theobroma cacao HOM05D004364 ORTHO05D006299 1.3e-35 153.3 104 71.2
Aa31LG8G7430 Aethionema arabicum HOM05D004364 ORTHO05D006299 1.7e-35 152.9 102 67.6
Lj3g0027191 Lotus japonicus HOM05D004364 ORTHO05D006299 1.7e-35 152.9 103 70.9
Glyma.06G255000 Glycine max HOM05D004364 ORTHO05D006299 3.8e-35 151.8 100 72.0
Glyma.12G146600 Glycine max HOM05D004364 ORTHO05D006299 3.8e-35 151.8 101 71.3
HanXRQChr13g0407291 Helianthus annuus HOM05D004364 ORTHO05D006299 5.0e-35 151.4 101 69.3
Oeu060533.1 Olea europaea HOM05D004364 ORTHO05D006299 8.5e-35 150.6 106 71.7
Sp3g18670 Schrenkiella parvula HOM05D004364 ORTHO05D006299 8.5e-35 150.6 104 66.3
RhsimUnG0257500 Rhododendron simsii HOM05D004364 ORTHO05D006299 1.1e-34 150.2 101 68.3
AUR62029293 Chenopodium quinoa HOM05D004364 ORTHO05D006299 1.5e-34 149.8 101 64.4
BcaB06g26128 Brassica carinata HOM05D004364 ORTHO05D006299 2.5e-34 149.1 103 68.0
BcaC05g28303 Brassica carinata HOM05D004364 ORTHO05D006299 2.5e-34 149.1 103 68.0
A05p28190 Brassica napus HOM05D004364 ORTHO05D006299 2.5e-34 149.1 103 68.0
BolC5t33082H Brassica oleracea HOM05D004364 ORTHO05D006299 2.5e-34 149.1 103 68.0
BraA05t21700Z Brassica rapa HOM05D004364 ORTHO05D006299 2.5e-34 149.1 103 68.0
COL.COLO4_09498 Corchorus olitorius HOM05D004364 ORTHO05D006299 2.5e-34 149.1 104 67.3
BcaC01g03545 Brassica carinata HOM05D004364 ORTHO05D006299 3.2e-34 148.7 103 68.0
C03p51230 Brassica napus HOM05D004364 ORTHO05D006299 3.2e-34 148.7 103 68.0
BolC3t17413H Brassica oleracea HOM05D004364 ORTHO05D006299 3.2e-34 148.7 103 68.0
Migut.H01895 Erythranthe guttata HOM05D004364 ORTHO05D006299 4.2e-34 148.3 104 70.2
SalBow7G1127 Salvia bowleyana HOM05D004364 ORTHO05D006299 4.2e-34 148.3 102 70.6
THA.LOC104816919 Tarenaya hassleriana HOM05D004364 ORTHO05D006299 5.5e-34 147.9 103 68.0
A03p41850 Brassica napus HOM05D004364 ORTHO05D006299 7.2e-34 147.5 102 66.7
BraA03t13338Z Brassica rapa HOM05D004364 ORTHO05D006299 7.2e-34 147.5 102 66.7
Thhalv10020069m.g Eutrema salsugineum HOM05D004364 ORTHO05D006299 9.4e-34 147.1 102 65.7
HPP92_005995 Vanilla planifolia HOM05D004364 ORTHO05D006299 9.4e-34 147.1 103 68.0
MSTRG.12935 Avicennia marina HOM05D004364 ORTHO05D006299 1.2e-33 146.7 102 70.6
BcaB04g19118 Brassica carinata HOM05D004364 ORTHO05D006299 1.2e-33 146.7 102 65.7
C05p43630 Brassica napus HOM05D004364 ORTHO05D006299 2.7e-33 145.6 103 67.0
Actinidia35287 Actinidia chinensis HOM05D004364 ORTHO05D006299 3.6e-33 145.2 93 71.0
SGA_v2.0_scaffold9G04963 Striga asiatica HOM05D004364 ORTHO05D006299 6.1e-33 144.4 104 70.2
AL3G34510 Arabidopsis lyrata HOM05D004364 ORTHO05D006299 8.0e-33 144.1 99 64.6
AT3G20630 Arabidopsis thaliana HOM05D004364 ORTHO05D006299 1.0e-32 143.7 99 63.6
Carub.0003s2061 Capsella rubella HOM05D004364 ORTHO05D006299 1.0e-32 143.7 103 65.0
CDE01G0428 Ceratophyllum demersum HOM05D004364 ORTHO05D006299 1.8e-32 142.9 102 66.7
HanXRQChr03g0076071 Helianthus annuus HOM05D004364 ORTHO05D006299 4.0e-32 141.7 101 69.3
DCAR_008692 Daucus carota HOM05D004364 ORTHO05D006299 6.8e-32 141.0 90 75.6
Zm00001eb336890 Zea mays HOM05D004364 ORTHO05D006299 6.8e-32 141.0 101 59.4
CARHR096430 Cardamine hirsuta HOM05D004364 ORTHO05D006299 8.8e-32 140.6 104 62.5
Os01g0177200 Oryza sativa ssp. japonica HOM05D004364 ORTHO05D006299 1.2e-31 140.2 98 62.2
SEGI_22005 Sequoiadendron giganteum HOM05D004364 ORTHO05D006299 2.8e-30 135.6 98 63.3
SMO347G0465 Selaginella moellendorffii HOM05D004364 ORTHO05D006299 8.3e-30 134.0 100 61.0
unitig_21.g20140 Utricularia gibba HOM05D004364 ORTHO05D006299 8.3e-30 134.0 102 62.7
Mapoly0028s0083 Marchantia polymorpha HOM05D004364 ORTHO05D006299 2.9e-27 125.6 103 55.3
arahy.Tifrunner.gnm1.ann1.CZGD0C Arachis hypogaea HOM05D004364 ORTHO05D006299 1.6e-25 119.8 97 63.9
Pp3c19_17130 Physcomitrium patens HOM05D004364 ORTHO05D006299 2.7e-25 119.0 102 53.9
CBR_g76006 Chara braunii HOM05D004364 ORTHO05D006299 1.0e-24 117.1 110 50.9
Lsat_1_v5_gn_0_5341 Lactuca sativa HOM05D004364 ORTHO05D006299 1.8e-21 106.3 77 63.6
Haze_09550 Corylus avellana HOM05D004364 ORTHO05D006299 4.1e-21 105.1 72 70.8
Medtr4g077475 Medicago truncatula HOM05D004364 ORTHO05D006299 1.0e-19 100.5 75 60.0
Cre02.g080350 Chlamydomonas reinhardtii HOM05D004364 ORTHO05D006299 1.7e-19 99.8 61 63.9
TAR624G0891 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.9e-18 96.3 73 64.4
TAR624G0100 Trochodendron aralioides HOM05D004364 ORTHO05D006299 3.3e-18 95.5 70 65.7
MCO15G328 Micromonas commoda HOM05D004364 ORTHO05D006299 1.6e-17 93.2 108 43.5
Haze_26164 Corylus avellana HOM05D004364 ORTHO05D006299 2.1e-17 92.8 103 45.6
Lj8A161G44 Lonicera japonica HOM05D004364 ORTHO05D006299 1.8e-16 89.7 92 52.2
MD15G1178000 Malus domestica HOM05D004364 ORTHO05D006299 4.5e-12 75.1 59 54.2
PRCOL_00003961 Prasinoderma coloniale HOM05D004364 ORTHO05D006299 4.3e-10 68.6 72 47.2
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 1.3e-06 57.0 43 72.1
unitig_699.g19210 Utricularia gibba HOM05D004364 ORTHO05D419566 4.9e-06 55.1 53 52.8


User provided reference genes

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