Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014042001 Vitis vinifera HOM05D004178 ORTHO05D005204 9.6e-92 340.1 168 100.0
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.6e-62 243.0 136 90.4
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 2.3e-53 212.6 137 78.8
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 3.7e-51 205.3 129 78.3
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 4.1e-50 201.8 137 75.9
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 9.1e-50 200.7 137 74.5
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 1.5e-49 199.9 134 74.6
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 3.4e-49 198.7 128 77.3
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 3.4e-49 198.7 137 75.2
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 4.5e-49 198.4 137 73.7
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 1.0e-48 197.2 137 73.7
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 2.9e-48 195.7 137 74.5
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 8.5e-48 194.1 153 66.0
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 1.4e-47 193.4 129 74.4
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 1.6e-46 189.9 137 70.1
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 2.1e-46 189.5 137 70.1
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 2.1e-46 189.5 137 70.1
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 3.6e-46 188.7 137 70.1
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 3.0e-45 185.7 137 68.6
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 3.9e-45 185.3 128 72.7
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 3.9e-45 185.3 129 72.1
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 3.9e-45 185.3 137 70.1
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 5.1e-45 184.9 137 70.1
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 8.8e-45 184.1 134 69.4
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 1.5e-44 183.3 134 69.4
Atru.chr1.753 Acer truncatum HOM05D004178 ORTHO05D005204 3.3e-44 182.2 129 72.1
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 4.4e-44 181.8 128 69.5
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 1.7e-43 179.9 134 69.4
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 4.1e-42 175.3 138 64.5
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 5.3e-42 174.9 134 67.2
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 9.1e-42 174.1 149 61.7
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 1.2e-41 173.7 137 65.0
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 1.6e-41 173.3 134 67.9
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 3.5e-41 172.2 137 65.0
SEGI_03190 Sequoiadendron giganteum HOM05D004178 ORTHO05D005204 3.5e-41 172.2 134 64.9
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 4.5e-41 171.8 136 61.8
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 4.5e-41 171.8 137 64.2
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 4.5e-41 171.8 134 68.7
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 7.7e-41 171.0 134 65.7
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 1.0e-40 170.6 129 65.1
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 1.3e-40 170.2 134 67.2
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 1.7e-40 169.9 142 62.0
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 2.9e-40 169.1 137 64.2
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 6.5e-40 167.9 136 64.7
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 1.1e-39 167.2 133 65.4
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.5e-39 166.8 137 63.5
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.5e-39 166.8 137 62.8
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 1.5e-39 166.8 141 62.4
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 1.9e-39 166.4 137 63.5
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 2.5e-39 166.0 117 73.5
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 3.2e-39 165.6 137 62.8
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 3.2e-39 165.6 137 62.8
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 3.2e-39 165.6 137 62.8
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 3.2e-39 165.6 137 62.8
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 4.2e-39 165.2 137 62.8
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.2e-39 165.2 131 64.9
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 4.2e-39 165.2 137 66.4
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 4.2e-39 165.2 134 63.4
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 5.5e-39 164.9 137 61.3
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 7.2e-39 164.5 137 62.0
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.2e-39 164.5 137 62.0
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 9.4e-39 164.1 137 62.0
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 9.4e-39 164.1 137 62.0
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.2e-38 163.7 137 62.0
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.2e-38 163.7 137 62.0
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.2e-38 163.7 137 62.0
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 1.2e-38 163.7 129 65.1
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 1.2e-38 163.7 130 66.2
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 1.6e-38 163.3 128 67.2
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 3.6e-38 162.2 134 59.7
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 4.7e-38 161.8 137 59.1
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 4.7e-38 161.8 137 61.3
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 6.1e-38 161.4 137 59.9
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 1.8e-37 159.8 137 61.3
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 5.2e-37 158.3 134 61.2
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 6.7e-37 157.9 137 59.1
Hund11836 Selenicereus undatus HOM05D004178 ORTHO05D005204 2.6e-36 156.0 137 60.6
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 4.4e-36 155.2 134 59.7
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 7.5e-36 154.5 134 56.7
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 7.5e-36 154.5 134 56.7
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 2.8e-35 152.5 137 56.9
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 3.7e-35 152.1 137 58.4
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.0e-34 147.9 130 62.3
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 7.0e-34 147.9 136 55.1
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 2.7e-33 146.0 127 55.9
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 3.5e-33 145.6 141 61.0
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 5.9e-33 144.8 137 53.3
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 1.3e-32 143.7 138 55.1
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 2.9e-32 142.5 133 54.1
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 3.8e-32 142.1 134 56.7
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 3.8e-32 142.1 134 56.7
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 3.8e-32 142.1 136 52.2
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 8.5e-32 141.0 135 51.9
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 1.1e-31 140.6 134 56.7
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 1.1e-31 140.6 135 51.9
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 3.0e-29 132.5 137 51.8
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 3.4e-28 129.0 176 42.0
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.3e-27 127.1 136 48.5
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 2.2e-27 126.3 175 41.1
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 8.3e-27 124.4 129 50.4
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 8.3e-27 124.4 118 58.5
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 1.4e-26 123.6 183 43.2
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 5.5e-23 111.7 137 48.9
AL6G18010 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 8.8e-21 104.4 72 66.7
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 7.5e-20 101.3 134 41.8
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 1.0e-16 90.9 133 34.6
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 1.7e-16 90.1 85 52.9
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 8.6e-16 87.8 121 42.1
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 8.0e-14 81.3 134 33.6
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 6.4e-11 71.6 134 38.1
QL07p015796 Quercus lobata HOM05D004178 ORTHO05D005204 1.1e-10 70.9 64 60.9
Ca_27645_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 4.6e-09 65.5 47 66.0
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 1.6e-06 57.0 134 31.3


User provided reference genes

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