Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01004332001 Vitis vinifera HOM05D004664 ORTHO05D005526 5.1e-150 534.3 246 100.0
GSVIVG01002826001 Vitis vinifera HOM05D004664 ORTHO05D005526 4.3e-149 531.2 246 99.2
Nn1g08288 Nelumbo nucifera HOM05D004664 ORTHO05D005526 1.9e-120 436.0 241 80.5
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 2.5e-117 425.6 240 78.3
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 2.8e-116 422.2 242 78.5
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 8.2e-116 420.6 243 76.1
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 5.3e-115 417.9 243 77.0
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 1.2e-114 416.8 243 77.0
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 1.7e-113 412.9 243 75.7
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 3.8e-113 411.8 244 77.5
CiPaw.09G112800 Carya illinoinensis HOM05D004664 ORTHO05D005526 8.4e-113 410.6 243 77.4
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 9.3e-112 407.1 243 77.0
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 2.7e-111 405.6 243 72.4
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 2.7e-111 405.6 243 73.7
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 6.1e-111 404.4 243 72.4
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 6.1e-111 404.4 243 72.4
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 7.9e-111 404.1 243 72.0
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 1.0e-110 403.7 243 75.3
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 1.0e-110 403.7 244 74.2
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 1.3e-110 403.3 242 72.7
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 1.8e-110 402.9 243 74.9
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 2.3e-110 402.5 244 73.8
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 8.7e-110 400.6 243 74.5
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 1.1e-109 400.2 243 74.1
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 1.9e-109 399.4 243 71.6
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 3.3e-109 398.7 243 76.5
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 3.3e-109 398.7 243 74.1
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 3.3e-109 398.7 243 74.1
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 4.3e-109 398.3 243 72.0
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 5.7e-109 397.9 242 71.9
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 1.3e-108 396.7 242 73.6
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 2.2e-108 396.0 241 71.8
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 1.8e-107 392.9 243 73.7
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 2.4e-107 392.5 243 74.1
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 4.1e-107 391.7 241 71.8
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 1.2e-106 390.2 243 70.4
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 2.6e-106 389.0 243 72.0
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 2.6e-106 389.0 243 74.1
Lj6A128T19 Lonicera japonica HOM05D004664 ORTHO05D005526 1.3e-105 386.7 249 73.5
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 1.7e-105 386.3 227 77.5
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 6.5e-105 384.4 242 69.0
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 6.5e-105 384.4 243 70.8
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 2.5e-104 382.5 243 69.5
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 2.5e-104 382.5 243 70.8
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 9.4e-104 380.6 243 68.7
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 2.1e-103 379.4 246 69.9
Sed0026896 Sechium edule HOM05D004664 ORTHO05D005526 4.6e-103 378.3 239 69.9
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 4.6e-103 378.3 243 68.3
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 2.3e-102 375.9 243 70.0
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 3.9e-102 375.2 235 70.2
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 3.9e-102 375.2 243 67.9
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 5.1e-102 374.8 240 70.0
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 6.7e-102 374.4 242 67.8
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 8.8e-102 374.0 240 69.2
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 8.8e-102 374.0 243 67.1
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 1.5e-101 373.2 240 69.2
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 3.3e-101 372.1 243 67.1
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 3.3e-101 372.1 240 68.3
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 3.3e-101 372.1 241 69.3
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 4.3e-101 371.7 243 67.1
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 9.7e-101 370.5 244 68.4
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 3.7e-100 368.6 244 68.4
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 8.2e-100 367.5 243 66.7
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 1.1e-99 367.1 224 71.4
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 1.1e-99 367.1 239 67.4
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 1.4e-99 366.7 244 69.3
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 4.1e-99 365.2 250 66.4
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 2.0e-98 362.8 239 66.1
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 5.0e-97 358.2 244 67.2
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 4.2e-96 355.1 223 68.6
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 7.2e-96 354.4 243 64.2
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 2.1e-95 352.8 248 65.7
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 2.7e-95 352.4 243 63.8
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 3.6e-95 352.1 245 65.7
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 3.6e-95 352.1 232 68.1
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 6.1e-95 351.3 241 65.1
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 1.4e-94 350.1 239 66.5
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 1.8e-94 349.7 249 65.5
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 2.6e-93 345.9 246 65.4
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 3.3e-93 345.5 244 64.8
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 4.8e-92 341.7 246 64.2
AL1G42190 Arabidopsis lyrata HOM05D004664 ORTHO05D005526 6.3e-92 341.3 243 67.1
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 8.2e-92 340.9 238 64.7
Thhalv10008005m.g Eutrema salsugineum HOM05D004664 ORTHO05D005526 1.1e-91 340.5 243 65.8
AT1G28560 Arabidopsis thaliana HOM05D004664 ORTHO05D005526 7.0e-91 337.8 243 66.7
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 9.1e-91 337.4 244 63.9
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 4.5e-90 335.1 245 61.6
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 5.0e-89 331.6 243 64.2
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 5.0e-89 331.6 243 64.2
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 8.5e-89 330.9 243 65.0
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 1.1e-88 330.5 243 64.2
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 1.5e-88 330.1 243 63.8
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 1.5e-88 330.1 243 63.8
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 2.5e-88 329.3 223 67.3
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 3.2e-88 328.9 239 61.9
Carub.0001s2702 Capsella rubella HOM05D004664 ORTHO05D005526 7.2e-88 327.8 243 64.6
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 8.0e-87 324.3 243 63.8
Lj1A1166T78 Lonicera japonica HOM05D004664 ORTHO05D005526 3.0e-86 322.4 245 63.3
Os01g0912600 Oryza sativa ssp. japonica HOM05D004664 ORTHO05D005526 3.3e-85 318.9 243 60.5
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 5.7e-85 318.2 241 63.9
Cc09_g09390 Coffea canephora HOM05D004664 ORTHO05D005526 5.3e-83 311.6 200 71.0
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 1.0e-81 307.4 237 63.3
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 1.1e-80 303.9 239 58.6
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 1.9e-80 303.1 224 62.1
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 4.2e-80 302.0 235 60.4
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 3.6e-79 298.9 210 63.8
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 2.0e-77 293.1 241 56.0
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 1.7e-76 290.0 216 65.3
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 6.3e-76 288.1 172 75.0
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 3.1e-75 285.8 241 55.6
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 1.0e-73 280.8 176 70.5
Mapoly0028s0050 Marchantia polymorpha HOM05D004664 ORTHO05D005526 6.8e-70 268.1 244 52.5
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.5e-69 266.9 183 63.4
AagrBONN_evm.TU.Sc2ySwM_117.2257 Anthoceros agrestis HOM05D004664 ORTHO05D005526 9.8e-69 264.2 242 51.7
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.3e-68 263.8 243 54.7
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 6.3e-68 261.5 246 52.4
Sp1g24810 Schrenkiella parvula HOM05D004664 ORTHO05D005526 4.5e-66 255.4 184 65.8
Pp3c2_3010 Physcomitrium patens HOM05D004664 ORTHO05D005526 2.9e-65 252.7 246 48.8
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 7.5e-61 238.0 171 64.9
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 8.6e-57 224.6 148 66.9
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.2e-55 220.7 137 73.0
Aqoxy1G03234 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 8.9e-54 214.5 133 72.2
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 3.4e-53 212.6 135 69.6
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 3.7e-52 209.1 196 52.0
ECA238G2574 Erigeron canadensis HOM05D004664 ORTHO05D005526 2.3e-49 199.9 207 51.2
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 5.6e-48 195.3 244 43.0
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 5.6e-48 195.3 146 61.6
SMO358G0740 Selaginella moellendorffii HOM05D004664 ORTHO05D005526 6.6e-41 171.8 184 44.0
DCAR_028981 Daucus carota HOM05D004664 ORTHO05D005526 9.5e-40 167.9 126 63.5
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 3.5e-34 149.4 130 54.6
ECA237G0002 Erigeron canadensis HOM05D004664 ORTHO05D005526 7.3e-24 115.2 159 42.1
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 1.3e-20 104.4 63 74.6
Duzib251G0924 Durio zibethinus HOM05D004664 ORTHO05D005526 4.9e-20 102.4 72 65.3
MCO08G225 Micromonas commoda HOM05D004664 ORTHO05D005526 1.1e-19 101.3 114 42.1
RcHm_v2.0_Chr6g0271881 Rosa chinensis HOM05D004664 ORTHO05D005526 1.9e-19 100.5 73 64.4
RcHm_v2.0_Chr6g0271991 Rosa chinensis HOM05D004664 ORTHO05D005526 3.2e-19 99.8 65 64.6
RcHm_v2.0_Chr6g0271891 Rosa chinensis HOM05D004664 ORTHO05D005526 1.6e-18 97.4 67 61.2
Duzib251G0925 Durio zibethinus HOM05D004664 ORTHO05D005526 7.9e-18 95.1 67 61.2
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 1.5e-13 80.9 49 67.3
Cre15.g636650 Chlamydomonas reinhardtii HOM05D004664 ORTHO05D005526 5.1e-09 65.9 125 33.6


User provided reference genes

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