Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 2.7e-74 282.0 145 100.0
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 2.7e-74 282.0 145 100.0
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 9.5e-72 273.5 145 95.2
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 1.6e-71 272.7 145 95.2
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 6.2e-71 270.8 145 93.8
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 8.0e-71 270.4 145 93.8
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 1.4e-70 269.6 145 93.1
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 1.4e-70 269.6 145 93.1
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 1.4e-70 269.6 145 93.1
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 1.8e-70 269.2 145 93.8
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 3.1e-70 268.5 145 92.4
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 4.0e-70 268.1 145 92.4
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 5.2e-70 267.7 145 91.7
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 5.2e-70 267.7 145 91.7
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 5.2e-70 267.7 145 91.7
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 5.2e-70 267.7 145 91.7
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 5.2e-70 267.7 145 92.4
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 6.8e-70 267.3 145 92.4
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 1.2e-69 266.5 145 91.7
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 1.2e-69 266.5 145 91.7
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 1.2e-69 266.5 145 91.7
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 1.5e-69 266.2 145 91.7
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 2.0e-69 265.8 145 93.1
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.0e-69 265.8 145 91.0
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 2.6e-69 265.4 145 91.0
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 4.4e-69 264.6 145 91.7
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 4.4e-69 264.6 145 91.0
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 4.4e-69 264.6 145 91.0
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 4.4e-69 264.6 145 90.3
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 4.4e-69 264.6 145 92.4
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 4.4e-69 264.6 144 91.7
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 7.5e-69 263.8 145 91.7
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 9.8e-69 263.5 145 91.0
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 9.8e-69 263.5 145 91.7
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 9.8e-69 263.5 145 91.7
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 1.3e-68 263.1 145 91.0
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 1.3e-68 263.1 145 90.3
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 1.7e-68 262.7 145 91.7
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 2.9e-68 261.9 145 89.7
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 2.9e-68 261.9 145 89.7
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 3.7e-68 261.5 145 89.7
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 3.7e-68 261.5 145 91.0
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 6.4e-68 260.8 145 91.0
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 6.4e-68 260.8 145 89.7
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 1.1e-67 260.0 145 90.3
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 1.9e-67 259.2 145 88.3
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 2.4e-67 258.8 145 89.0
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 4.1e-67 258.1 145 89.0
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 4.1e-67 258.1 145 88.3
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 5.4e-67 257.7 145 89.0
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 5.4e-67 257.7 140 90.7
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 7.0e-67 257.3 145 89.0
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 7.0e-67 257.3 145 88.3
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 7.0e-67 257.3 145 88.3
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 7.0e-67 257.3 145 87.6
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 1.2e-66 256.5 145 89.0
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 2.0e-66 255.8 145 90.3
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 2.7e-66 255.4 145 87.6
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 2.7e-66 255.4 145 89.7
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 3.5e-66 255.0 145 86.2
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 3.5e-66 255.0 143 87.4
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 3.5e-66 255.0 145 86.9
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 3.5e-66 255.0 145 89.7
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 4.6e-66 254.6 139 92.1
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 4.6e-66 254.6 145 87.6
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 7.8e-66 253.8 145 86.9
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 7.8e-66 253.8 145 86.9
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 3.9e-65 251.5 145 84.8
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 3.9e-65 251.5 145 84.8
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 5.0e-65 251.1 145 86.2
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 8.6e-65 250.4 145 86.2
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 8.6e-65 250.4 145 86.2
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 1.1e-64 250.0 145 84.8
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 1.5e-64 249.6 145 84.1
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 1.9e-64 249.2 141 88.7
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 2.5e-64 248.8 145 86.9
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 7.3e-64 247.3 145 83.4
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.6e-63 246.1 145 83.4
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.6e-63 246.1 145 83.4
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 1.6e-63 246.1 145 82.8
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 2.1e-63 245.7 145 84.1
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 2.1e-63 245.7 145 82.8
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 2.1e-63 245.7 145 82.8
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 2.1e-63 245.7 145 82.8
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 2.8e-63 245.4 138 88.4
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 2.8e-63 245.4 143 83.9
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 3.6e-63 245.0 145 82.8
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 3.6e-63 245.0 141 86.5
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 4.7e-63 244.6 145 82.1
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 4.7e-63 244.6 145 83.4
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 1.4e-62 243.0 145 82.1
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 1.4e-62 243.0 145 82.1
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 1.8e-62 242.7 145 85.5
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 3.1e-62 241.9 145 81.4
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 3.1e-62 241.9 145 81.4
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 6.8e-62 240.7 144 79.2
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 8.9e-62 240.4 145 82.8
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 4.9e-60 234.6 143 76.2
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 8.3e-60 233.8 145 77.2
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 7.1e-59 230.7 144 77.1
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 7.8e-58 227.3 143 77.6
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 1.5e-56 223.0 143 73.4
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 2.8e-55 218.8 145 72.4
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 6.8e-54 214.2 145 74.5
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 7.1e-51 204.1 129 76.0
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 1.3e-49 199.9 138 70.3
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 6.6e-49 197.6 104 95.2
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.5e-48 196.4 129 73.6
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.6e-47 193.0 117 76.9
Atru.chr9.1203 Acer truncatum HOM05D001887 ORTHO05D006549 2.2e-44 182.6 98 92.9
Sed0025805 Sechium edule HOM05D001887 ORTHO05D006549 3.5e-34 148.7 142 59.9
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 1.9e-32 142.9 163 49.1
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 6.2e-31 137.9 75 90.7
AagrBONN_evm.TU.Sc2ySwM_362.220 Anthoceros agrestis HOM05D001887 ORTHO05D006549 3.1e-30 135.6 85 75.3
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 3.7e-23 112.1 141 41.8
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 3.8e-20 102.1 85 65.9
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 1.8e-17 93.2 140 38.6
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 1.5e-13 80.1 120 39.2


User provided reference genes

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